Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0532 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 1.5e-195 686.0 352 100.0
CDE06G2673 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 2.4e-116 422.9 257 86.8
Nn6g34090 Nelumbo nucifera HOM05D005574 ORTHO05D007102 1.8e-68 263.8 360 43.1
Dinv44545 Davidia involucrata HOM05D005574 ORTHO05D007102 4.5e-67 259.2 368 45.4
Cfa015664 Carpinus fangiana HOM05D005574 ORTHO05D007102 2.3e-63 246.9 332 44.9
Duzib268G0255 Durio zibethinus HOM05D005574 ORTHO05D007102 3.0e-63 246.5 340 43.5
Thecc.04G192400 Theobroma cacao HOM05D005574 ORTHO05D007102 6.7e-63 245.4 307 44.6
Potri.010G086100 Populus trichocarpa HOM05D005574 ORTHO05D007102 8.8e-63 245.0 339 42.2
Atru.chr4.2447 Acer truncatum HOM05D005574 ORTHO05D007102 2.0e-62 243.8 337 42.4
TAR362G0087 Trochodendron aralioides HOM05D005574 ORTHO05D007102 2.6e-62 243.4 359 41.8
Gorai.011G151700 Gossypium raimondii HOM05D005574 ORTHO05D007102 4.4e-62 242.7 333 43.8
CSS0019466 Camellia sinensis var. sinensis HOM05D005574 ORTHO05D007102 1.7e-61 240.7 338 42.9
Ciclev10005241m.g Citrus clementina HOM05D005574 ORTHO05D007102 2.8e-61 240.0 302 47.0
Gohir.D10G136700 Gossypium hirsutum HOM05D005574 ORTHO05D007102 4.8e-61 239.2 333 43.5
COL.COLO4_05700 Corchorus olitorius HOM05D005574 ORTHO05D007102 1.4e-60 237.7 311 46.0
TWI53G0495 Tripterygium wilfordii HOM05D005574 ORTHO05D007102 4.1e-60 236.1 331 42.6
CiPaw.02G098000 Carya illinoinensis HOM05D005574 ORTHO05D007102 5.3e-60 235.7 313 44.1
Sabra10G0057600 Salix brachista HOM05D005574 ORTHO05D007102 5.3e-60 235.7 328 42.4
Peaxi162Scf00092g00614 Petunia axillaris HOM05D005574 ORTHO05D007102 7.0e-60 235.3 335 43.0
Aqoxy2G03411 Aquilegia oxysepala HOM05D005574 ORTHO05D007102 2.0e-59 233.8 352 40.3
Gohir.A10G129500 Gossypium hirsutum HOM05D005574 ORTHO05D007102 2.6e-59 233.4 334 43.4
Glyma.20G147200 Glycine max HOM05D005574 ORTHO05D007102 3.5e-59 233.0 329 42.2
PSO210G4004 Papaver somniferum HOM05D005574 ORTHO05D007102 7.7e-59 231.9 345 42.0
Rhsim04G0201500 Rhododendron simsii HOM05D005574 ORTHO05D007102 7.7e-59 231.9 343 40.5
GSVIVG01017997001 Vitis vinifera HOM05D005574 ORTHO05D007102 1.7e-58 230.7 324 43.2
Haze_00883 Corylus avellana HOM05D005574 ORTHO05D007102 2.2e-58 230.3 331 41.7
AUR62034712 Chenopodium quinoa HOM05D005574 ORTHO05D007102 6.5e-58 228.8 347 41.2
Solyc09g082180.3 Solanum lycopersicum HOM05D005574 ORTHO05D007102 6.5e-58 228.8 320 43.8
Glyma.10G247300 Glycine max HOM05D005574 ORTHO05D007102 8.5e-58 228.4 329 41.3
QL06p002087 Quercus lobata HOM05D005574 ORTHO05D007102 1.9e-57 227.3 311 43.4
Hma1.2p1_0602F.1_g187410 Hydrangea macrophylla HOM05D005574 ORTHO05D007102 4.2e-57 226.1 315 43.2
SalBow2G1029 Salvia bowleyana HOM05D005574 ORTHO05D007102 7.2e-57 225.3 332 41.9
Sopen09g031060 Solanum pennellii HOM05D005574 ORTHO05D007102 4.7e-56 222.6 320 43.1
MSTRG.9977 Avicennia marina HOM05D005574 ORTHO05D007102 6.1e-56 222.2 334 42.8
AUR62033680 Chenopodium quinoa HOM05D005574 ORTHO05D007102 1.4e-55 221.1 309 41.4
Ah.13g071610 Amaranthus hybridus HOM05D005574 ORTHO05D007102 3.0e-55 219.9 291 43.0
FAN02G2947 Fragaria x ananassa HOM05D005574 ORTHO05D007102 5.2e-55 219.2 331 41.4
Actinidia23520 Actinidia chinensis HOM05D005574 ORTHO05D007102 1.1e-54 218.0 332 41.0
FAN07G2976 Fragaria x ananassa HOM05D005574 ORTHO05D007102 1.1e-54 218.0 323 41.8
Nitab4.5_0001920g0060 Nicotiana tabacum HOM05D005574 ORTHO05D007102 1.5e-54 217.6 320 40.6
Nitab4.5_0004135g0020 Nicotiana tabacum HOM05D005574 ORTHO05D007102 2.6e-54 216.9 317 41.6
TPR.G5479 Trifolium pratense HOM05D005574 ORTHO05D007102 3.3e-54 216.5 320 39.1
DCAR_030644 Daucus carota HOM05D005574 ORTHO05D007102 4.4e-54 216.1 330 40.6
EL10Ac3g06494 Beta vulgaris HOM05D005574 ORTHO05D007102 5.7e-54 215.7 350 38.0
CsaV3_3G013190 Cucumis sativus L. HOM05D005574 ORTHO05D007102 5.7e-54 215.7 363 37.5
Hund12118 Selenicereus undatus HOM05D005574 ORTHO05D007102 7.5e-54 215.3 312 42.6
Migut.G00347 Erythranthe guttata HOM05D005574 ORTHO05D007102 1.3e-53 214.5 363 39.4
Prupe.1G015700 Prunus persica HOM05D005574 ORTHO05D007102 1.3e-53 214.5 317 41.0
FvH4_4g16270 Fragaria vesca HOM05D005574 ORTHO05D007102 1.7e-53 214.2 330 39.7
FAN12G0525 Fragaria x ananassa HOM05D005574 ORTHO05D007102 1.7e-53 214.2 330 39.7
FAN12G2145 Fragaria x ananassa HOM05D005574 ORTHO05D007102 1.7e-53 214.2 330 39.7
FAN12G2997 Fragaria x ananassa HOM05D005574 ORTHO05D007102 1.7e-53 214.2 330 39.7
Medtr1g103560 Medicago truncatula HOM05D005574 ORTHO05D007102 1.7e-53 214.2 310 41.9
RcHm_v2.0_Chr4g0415861 Rosa chinensis HOM05D005574 ORTHO05D007102 1.7e-53 214.2 323 39.6
MELO3C006525.2 Cucumis melo HOM05D005574 ORTHO05D007102 2.8e-53 213.4 364 37.1
Sed0003604 Sechium edule HOM05D005574 ORTHO05D007102 2.8e-53 213.4 340 41.2
Sp1g04310 Schrenkiella parvula HOM05D005574 ORTHO05D007102 3.7e-53 213.0 314 41.1
MD13G1194900 Malus domestica HOM05D005574 ORTHO05D007102 4.8e-53 212.6 318 41.5
MSTRG.4036 Avicennia marina HOM05D005574 ORTHO05D007102 8.2e-53 211.8 336 40.8
MD16G1195700 Malus domestica HOM05D005574 ORTHO05D007102 8.2e-53 211.8 309 43.0
AL1G15280 Arabidopsis lyrata HOM05D005574 ORTHO05D007102 1.1e-52 211.5 312 41.3
ClCG05G005090 Citrullus lanatus HOM05D005574 ORTHO05D007102 1.1e-52 211.5 338 38.5
Cc03_g03930 Coffea canephora HOM05D005574 ORTHO05D007102 1.1e-52 211.5 335 40.3
SGA_v2.0_scaffold257G45710 Striga asiatica HOM05D005574 ORTHO05D007102 1.1e-52 211.5 320 40.3
PSO761G0453 Papaver somniferum HOM05D005574 ORTHO05D007102 1.4e-52 211.1 316 42.1
Phvul.007G058100 Phaseolus vulgaris HOM05D005574 ORTHO05D007102 1.4e-52 211.1 325 39.1
Oeu058969.1 Olea europaea HOM05D005574 ORTHO05D007102 3.1e-52 209.9 346 40.5
Sed0027704 Sechium edule HOM05D005574 ORTHO05D007102 3.1e-52 209.9 340 37.9
CANSAT78G2217 Cannabis sativa HOM05D005574 ORTHO05D007102 7.0e-52 208.8 318 43.1
THA.LOC104800960 Tarenaya hassleriana HOM05D005574 ORTHO05D007102 1.6e-51 207.6 334 39.2
arahy.Tifrunner.gnm1.ann1.PUQJ4X Arachis hypogaea HOM05D005574 ORTHO05D007102 2.7e-51 206.8 286 42.7
VMungo0720G0566 Vigna mungo HOM05D005574 ORTHO05D007102 2.7e-51 206.8 321 38.6
Manes.03G177100 Manihot esculenta HOM05D005574 ORTHO05D007102 3.5e-51 206.5 330 39.7
arahy.Tifrunner.gnm1.ann1.R5YE9W Arachis hypogaea HOM05D005574 ORTHO05D007102 7.7e-51 205.3 285 42.8
Dinv14005 Davidia involucrata HOM05D005574 ORTHO05D007102 1.3e-50 204.5 335 39.1
Psat6g206920 Pisum sativum HOM05D005574 ORTHO05D007102 3.8e-50 203.0 308 40.9
A10p04140 Brassica napus HOM05D005574 ORTHO05D007102 5.0e-50 202.6 307 39.1
BraA10t42684Z Brassica rapa HOM05D005574 ORTHO05D007102 5.0e-50 202.6 307 39.1
Thhalv10002568m.g Eutrema salsugineum HOM05D005574 ORTHO05D007102 5.0e-50 202.6 304 40.5
ATR0697G187 Amborella trichopoda HOM05D005574 ORTHO05D007102 1.1e-49 201.4 358 38.0
BcaC05g24386 Brassica carinata HOM05D005574 ORTHO05D007102 2.5e-49 200.3 299 40.5
C05p03780 Brassica napus HOM05D005574 ORTHO05D007102 2.5e-49 200.3 299 40.5
BolC5t29155H Brassica oleracea HOM05D005574 ORTHO05D007102 2.5e-49 200.3 299 40.5
Ca_10888_v3 Cicer arietinum L. HOM05D005574 ORTHO05D007102 2.7e-48 196.8 302 38.7
BcaB02g06860 Brassica carinata HOM05D005574 ORTHO05D007102 1.4e-47 194.5 311 39.9
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 2.6e-46 190.3 312 40.1
CARHR004930 Cardamine hirsuta HOM05D005574 ORTHO05D007102 7.5e-46 188.7 302 38.7
Carub.0001s0477 Capsella rubella HOM05D005574 ORTHO05D007102 9.8e-46 188.3 327 35.8
Lj5g0023935 Lotus japonicus HOM05D005574 ORTHO05D007102 1.3e-45 188.0 322 38.5
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 1.8e-44 184.1 315 36.8
SEGI_38250 Sequoiadendron giganteum HOM05D005574 ORTHO05D007102 3.1e-44 183.3 325 35.1
ECA234G0493 Erigeron canadensis HOM05D005574 ORTHO05D007102 4.1e-44 183.0 335 34.9
Eucgr.B01081 Eucalyptus grandis HOM05D005574 ORTHO05D007102 4.1e-44 183.0 286 40.6
Potri.008G154400 Populus trichocarpa HOM05D005574 ORTHO05D007102 9.1e-44 181.8 250 45.2
Lsat_1_v5_gn_5_104360 Lactuca sativa HOM05D005574 ORTHO05D007102 2.2e-42 177.2 329 35.9
Lalb_Chr02g0140631 Lupinus albus HOM05D005574 ORTHO05D007102 4.2e-41 172.9 303 37.6
PGR142G0953 Punica granatum HOM05D005574 ORTHO05D007102 7.2e-41 172.2 325 37.5
Duzib151G0572 Durio zibethinus HOM05D005574 ORTHO05D007102 2.3e-39 167.2 305 38.0
MBI15_g31435_MAGBIO Magnolia biondii HOM05D005574 ORTHO05D007102 3.0e-39 166.8 263 39.2
HPP92_009613 Vanilla planifolia HOM05D005574 ORTHO05D007102 5.2e-39 166.0 352 35.8
AT1G05440 Arabidopsis thaliana HOM05D005574 ORTHO05D007102 9.8e-38 161.8 311 35.7
Zm00001eb057090 Zea mays HOM05D005574 ORTHO05D007102 1.2e-35 154.8 322 35.1
HanXRQChr10g0294751 Helianthus annuus HOM05D005574 ORTHO05D007102 2.0e-35 154.1 323 33.1
CAN.G2204.2 Capsicum annuum HOM05D000340 ORTHO05D007102 5.0e-34 149.4 187 42.2
Os03g0747100 Oryza sativa ssp. japonica HOM05D005574 ORTHO05D007102 1.2e-32 144.8 311 34.1
CAN.G2204.4 Capsicum annuum HOM05D005574 ORTHO05D007102 3.0e-31 140.2 265 35.8
Actinidia40140 Actinidia chinensis HOM05D005574 ORTHO05D007102 2.7e-27 127.1 130 52.3
unitig_32.g11728 Utricularia gibba HOM05D005574 ORTHO05D007102 1.0e-26 125.2 350 30.0
SMO174G0025 Selaginella moellendorffii HOM05D005574 ORTHO05D007102 5.2e-23 112.8 288 29.5
AagrBONN_evm.TU.Sc2ySwM_117.3111 Anthoceros agrestis HOM05D005574 ORTHO05D007102 4.4e-22 109.8 272 31.2
ECA234G4095 Erigeron canadensis HOM05D005574 ORTHO05D007102 7.5e-22 109.0 185 36.2
BolC1t04542H Brassica oleracea HOM05D005574 ORTHO05D007102 6.4e-21 105.9 202 31.7
BolC5t33236H Brassica oleracea HOM05D005574 ORTHO05D007102 1.9e-20 104.4 194 32.5
C01p35960 Brassica napus HOM05D005574 ORTHO05D007102 5.4e-20 102.8 139 38.1
Cpa.g.sc58.90 Carica papaya HOM05D005574 ORTHO05D007102 5.4e-20 102.8 115 45.2
C03p05690 Brassica napus HOM05D005574 ORTHO05D022054 1.5e-17 94.7 101 45.5
BolC1t03554H Brassica oleracea HOM05D005574 ORTHO05D022054 3.1e-15 87.0 86 47.7
A02p27770 Brassica napus HOM05D005574 ORTHO05D007102 6.0e-11 72.8 107 37.4
BraA02t07818Z Brassica rapa HOM05D005574 ORTHO05D007102 6.0e-11 72.8 107 37.4
BcaC09g49493 Brassica carinata HOM05D005574 ORTHO05D007102 1.0e-10 72.0 153 30.1
A03p47670 Brassica napus HOM05D005574 ORTHO05D007102 2.3e-10 70.9 120 35.0
BraA07t27929Z Brassica rapa HOM05D005574 ORTHO05D007102 2.3e-10 70.9 107 36.4
BraA09t37853Z Brassica rapa HOM05D005574 ORTHO05D007102 2.3e-10 70.9 120 35.0
BraA09t41109Z Brassica rapa HOM05D005574 ORTHO05D007102 2.3e-10 70.9 97 41.2
BcaC07g42131 Brassica carinata HOM05D005574 ORTHO05D007102 3.0e-10 70.5 77 46.8
C08p51720 Brassica napus HOM05D005574 ORTHO05D007102 3.0e-10 70.5 77 46.8
A09p57160 Brassica napus HOM05D005574 ORTHO05D007102 1.1e-09 68.6 76 46.1
BolC3t13081H Brassica oleracea HOM05D005574 ORTHO05D007102 1.5e-09 68.2 108 36.1
A09p67440 Brassica napus HOM05D005574 ORTHO05D007102 1.6e-08 64.7 71 46.5
BcaC09g48798 Brassica carinata HOM05D005574 ORTHO05D007102 7.6e-06 55.8 82 34.1


User provided reference genes

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