Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0498 Ceratophyllum demersum HOM05D005516 ORTHO05D006713 1.7e-82 309.3 160 100.0
arahy.Tifrunner.gnm1.ann1.BMR428 Arachis hypogaea HOM05D005516 ORTHO05D006713 5.1e-34 148.3 122 65.6
PSO384G4582 Papaver somniferum HOM05D005516 ORTHO05D006713 1.9e-33 146.4 152 51.3
Dinv13791 Davidia involucrata HOM05D005516 ORTHO05D006713 2.5e-33 146.0 125 57.6
PSO339G3932 Papaver somniferum HOM05D005516 ORTHO05D006713 3.3e-33 145.6 152 52.0
Rhsim08G0097500 Rhododendron simsii HOM05D005516 ORTHO05D006713 1.3e-32 143.7 126 60.3
Ca_08316_v3 Cicer arietinum L. HOM05D005516 ORTHO05D006713 2.8e-32 142.5 120 65.0
vmacro08774 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 2.8e-32 142.5 109 66.1
Lalb_Chr14g0364851 Lupinus albus HOM05D005516 ORTHO05D006713 3.6e-32 142.1 121 64.5
vmacro04358 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 3.6e-32 142.1 146 50.7
CANSAT78G1214 Cannabis sativa HOM05D005516 ORTHO05D006713 4.8e-32 141.7 98 75.5
Hma1.2p1_0526F.1_g172910 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 6.2e-32 141.4 146 57.5
vmacro18891 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 5.3e-31 138.3 121 57.0
Gorai.013G196100 Gossypium raimondii HOM05D005516 ORTHO05D006713 2.6e-30 136.0 85 71.8
Glyma.16G035800 Glycine max HOM05D005516 ORTHO05D006713 9.9e-30 134.0 109 58.7
PGSC0003DMG400028211 Solanum tuberosum HOM05D005516 ORTHO05D006713 9.9e-30 134.0 92 76.1
THA.LOC104820795 Tarenaya hassleriana HOM05D005516 ORTHO05D006713 9.9e-30 134.0 86 68.6
CiPaw.09G166400 Carya illinoinensis HOM05D005516 ORTHO05D006713 1.3e-29 133.7 118 61.0
MSTRG.6254 Avicennia marina HOM05D005516 ORTHO05D006713 1.7e-29 133.3 86 79.1
CSS0039228 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 1.7e-29 133.3 86 74.4
Duzib106G1703 Durio zibethinus HOM05D005516 ORTHO05D006713 1.7e-29 133.3 121 59.5
Cfa017721 Carpinus fangiana HOM05D005516 ORTHO05D006713 2.2e-29 132.9 117 65.8
Sopen10g031880 Solanum pennellii HOM05D005516 ORTHO05D006713 2.2e-29 132.9 92 76.1
BcaB01g04919 Brassica carinata HOM05D005516 ORTHO05D006713 3.8e-29 132.1 99 69.7
CSS0003853 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 4.9e-29 131.7 88 70.5
VMungo1383G1686 Vigna mungo HOM05D005516 ORTHO05D006713 4.9e-29 131.7 122 54.1
Solyc10g081380.2 Solanum lycopersicum HOM05D005516 ORTHO05D006713 6.4e-29 131.3 92 76.1
Phvul.001G105600 Phaseolus vulgaris HOM05D005516 ORTHO05D006713 8.4e-29 131.0 113 58.4
Hund20711 Selenicereus undatus HOM05D005516 ORTHO05D006713 8.4e-29 131.0 118 55.1
Actinidia06205 Actinidia chinensis HOM05D005516 ORTHO05D006713 1.1e-28 130.6 114 60.5
CAN.G128.137 Capsicum annuum HOM05D005516 ORTHO05D006713 2.4e-28 129.4 120 61.7
ClCG04G004680 Citrullus lanatus HOM05D005516 ORTHO05D006713 2.4e-28 129.4 87 66.7
DCAR_016961 Daucus carota HOM05D005516 ORTHO05D006713 4.2e-28 128.6 88 65.9
AL6G28930 Arabidopsis lyrata HOM05D005516 ORTHO05D006713 7.1e-28 127.9 131 55.7
CSS0031486 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 7.1e-28 127.9 80 73.8
FAN19G1175 Fragaria x ananassa HOM05D005516 ORTHO05D006713 9.3e-28 127.5 99 63.6
FAN26G2397 Fragaria x ananassa HOM05D005516 ORTHO05D006713 9.3e-28 127.5 98 64.3
Glyma.19G117300 Glycine max HOM05D005516 ORTHO05D006713 1.2e-27 127.1 100 60.0
MD12G1011900 Malus domestica HOM05D005516 ORTHO05D006713 1.2e-27 127.1 131 53.4
FAN23G0165 Fragaria x ananassa HOM05D005516 ORTHO05D006713 2.1e-27 126.3 98 63.3
Oeu044207.1 Olea europaea HOM05D005516 ORTHO05D006713 2.1e-27 126.3 106 59.4
HPP92_000977 Vanilla planifolia HOM05D005516 ORTHO05D006713 2.1e-27 126.3 93 71.0
MBI05_g16554_MAGBIO Magnolia biondii HOM05D005516 ORTHO05D006713 2.7e-27 125.9 127 51.2
FvH4_1g29880 Fragaria vesca HOM05D005516 ORTHO05D006713 3.5e-27 125.6 98 63.3
Hma1.2p1_0526F.1_g172920 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 4.6e-27 125.2 84 67.9
TPR.G34794 Trifolium pratense HOM05D005516 ORTHO05D006713 4.6e-27 125.2 81 67.9
HPP92_001001 Vanilla planifolia HOM05D005516 ORTHO05D006713 4.6e-27 125.2 109 64.2
Prupe.7G015800 Prunus persica HOM05D005516 ORTHO05D006713 6.0e-27 124.8 113 55.8
Cc06_g21500 Coffea canephora HOM05D005516 ORTHO05D006713 7.9e-27 124.4 84 66.7
Aa31LG11G11740 Aethionema arabicum HOM05D005516 ORTHO05D006713 1.3e-26 123.6 90 67.8
Lj1g0004780 Lotus japonicus HOM05D005516 ORTHO05D006713 1.8e-26 123.2 132 49.2
COL.COLO4_20092 Corchorus olitorius HOM05D005516 ORTHO05D006713 2.3e-26 122.9 94 63.8
MD14G1009500 Malus domestica HOM05D005516 ORTHO05D006713 2.3e-26 122.9 128 49.2
CARHR195330 Cardamine hirsuta HOM05D005516 ORTHO05D006713 3.0e-26 122.5 92 62.0
MELO3C008865.2 Cucumis melo HOM05D005516 ORTHO05D006713 3.0e-26 122.5 83 67.5
CsaV3_4G031610 Cucumis sativus L. HOM05D005516 ORTHO05D006713 3.0e-26 122.5 83 67.5
Hma1.2p1_0106F.1_g051205 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 3.0e-26 122.5 84 66.7
Hund20712 Selenicereus undatus HOM05D005516 ORTHO05D006713 3.9e-26 122.1 114 54.4
C02p25840 Brassica napus HOM05D005516 ORTHO05D006713 5.1e-26 121.7 89 71.9
SGA_v2.0_scaffold66G22373 Striga asiatica HOM05D005516 ORTHO05D006713 6.7e-26 121.3 90 63.3
Sed0005064 Sechium edule HOM05D005516 ORTHO05D006713 8.7e-26 120.9 83 65.1
Sc07g0007460 Simmondsia chinensis HOM05D005516 ORTHO05D006713 8.7e-26 120.9 69 78.3
Psat3g086560 Pisum sativum HOM05D005516 ORTHO05D006713 1.1e-25 120.6 106 62.3
GSVIVG01029962001 Vitis vinifera HOM05D005516 ORTHO05D006713 1.1e-25 120.6 75 76.0
arahy.Tifrunner.gnm1.ann1.253MNK Arachis hypogaea HOM05D005516 ORTHO05D006713 1.5e-25 120.2 100 59.0
Eucgr.K01534 Eucalyptus grandis HOM05D005516 ORTHO05D006713 1.9e-25 119.8 73 71.2
Lsat_1_v5_gn_5_154420 Lactuca sativa HOM05D005516 ORTHO05D006713 1.9e-25 119.8 99 59.6
Medtr7g086700 Medicago truncatula HOM05D005516 ORTHO05D006713 2.5e-25 119.4 69 76.8
RcHm_v2.0_Chr3g0496031 Rosa chinensis HOM05D005516 ORTHO05D006713 2.5e-25 119.4 86 66.3
Sp6g26410 Schrenkiella parvula HOM05D005516 ORTHO05D006713 2.5e-25 119.4 81 64.2
TWI60G0181 Tripterygium wilfordii HOM05D005516 ORTHO05D006713 3.3e-25 119.0 136 52.2
AUR62018088 Chenopodium quinoa HOM05D005516 ORTHO05D006713 5.6e-25 118.2 83 62.7
ECA248G2342 Erigeron canadensis HOM05D005516 ORTHO05D006713 5.6e-25 118.2 96 57.3
SEGI_32239 Sequoiadendron giganteum HOM05D005516 ORTHO05D006713 7.4e-25 117.9 82 68.3
Atru.chr2.1522 Acer truncatum HOM05D005516 ORTHO05D006713 9.6e-25 117.5 76 69.7
Haze_20402 Corylus avellana HOM05D005516 ORTHO05D006713 9.6e-25 117.5 76 71.1
Nitab4.5_0000613g0140 Nicotiana tabacum HOM05D005516 ORTHO05D006713 9.6e-25 117.5 88 62.5
Sabra13G0057700 Salix brachista HOM05D005516 ORTHO05D006713 9.6e-25 117.5 78 70.5
SGA_v2.0_scaffold69G23215 Striga asiatica HOM05D000039 ORTHO05D000370 9.6e-25 117.5 91 61.5
Manes.08G152800 Manihot esculenta HOM05D005516 ORTHO05D006713 1.3e-24 117.1 75 72.0
QL07p017420 Quercus lobata HOM05D005516 ORTHO05D006713 1.3e-24 117.1 84 65.5
Thecc.05G241500 Theobroma cacao HOM05D005516 ORTHO05D006713 1.3e-24 117.1 144 49.3
Duzib128G1828 Durio zibethinus HOM05D005516 ORTHO05D006713 1.6e-24 116.7 70 74.3
Potri.019G040400 Populus trichocarpa HOM05D005516 ORTHO05D006713 2.1e-24 116.3 99 59.6
Duzib177G0157 Durio zibethinus HOM05D005516 ORTHO05D006713 2.8e-24 115.9 77 70.1
Peaxi162Scf00575g00619 Petunia axillaris HOM05D005516 ORTHO05D006713 2.8e-24 115.9 74 70.3
Zm00001eb052720 Zea mays HOM05D005516 ORTHO05D006713 3.7e-24 115.5 76 65.8
Carub.0006s1607 Capsella rubella HOM05D005516 ORTHO05D006713 4.8e-24 115.2 76 65.8
Potri.013G066000 Populus trichocarpa HOM05D005516 ORTHO05D006713 6.2e-24 114.8 141 47.5
Gorai.004G252300 Gossypium raimondii HOM05D005516 ORTHO05D006713 1.1e-23 114.0 117 55.6
HanXRQChr13g0406451 Helianthus annuus HOM05D005516 ORTHO05D006713 1.1e-23 114.0 67 71.6
AT5G17840 Arabidopsis thaliana HOM05D005516 ORTHO05D006713 1.4e-23 113.6 110 50.0
AUR62032011 Chenopodium quinoa HOM05D005516 ORTHO05D006713 1.8e-23 113.2 96 54.2
Ciclev10022543m.g Citrus clementina HOM05D005516 ORTHO05D006713 1.8e-23 113.2 81 65.4
DCAR_020653 Daucus carota HOM05D005516 ORTHO05D006713 1.8e-23 113.2 117 53.8
Thhalv10014907m.g Eutrema salsugineum HOM05D005516 ORTHO05D006713 3.1e-23 112.5 76 64.5
Nitab4.5_0000811g0010 Nicotiana tabacum HOM05D005516 ORTHO05D006713 3.1e-23 112.5 86 61.6
Gohir.A08G219566 Gossypium hirsutum HOM05D005516 ORTHO05D006713 4.0e-23 112.1 68 72.1
Pp3c8_890 Physcomitrium patens HOM05D005516 ORTHO05D006713 4.0e-23 112.1 104 62.5
TWI32G0326 Tripterygium wilfordii HOM05D005516 ORTHO05D006713 4.0e-23 112.1 77 67.5
Ah.13g074870 Amaranthus hybridus HOM05D005516 ORTHO05D006713 5.3e-23 111.7 86 60.5
Os03g0656201 Oryza sativa ssp. japonica HOM05D005516 ORTHO05D006713 9.0e-23 110.9 74 66.2
EL10Ac3g06621 Beta vulgaris HOM05D005516 ORTHO05D006713 1.2e-22 110.5 99 53.5
A03p08520 Brassica napus HOM05D005516 ORTHO05D006713 1.2e-22 110.5 76 64.5
Zm00001eb218270 Zea mays HOM05D005516 ORTHO05D006713 1.2e-22 110.5 101 52.5
BcaB01g05159 Brassica carinata HOM05D005516 ORTHO05D006713 1.5e-22 110.2 76 63.2
C03p09930 Brassica napus HOM05D005516 ORTHO05D006713 1.5e-22 110.2 76 63.2
BolC3t13481H Brassica oleracea HOM05D005516 ORTHO05D006713 1.5e-22 110.2 76 63.2
BraA03t10176Z Brassica rapa HOM05D005516 ORTHO05D006713 1.5e-22 110.2 76 63.2
MSTRG.26204 Avicennia marina HOM05D005516 ORTHO05D006713 3.4e-22 109.0 98 60.2
BcaB05g23282 Brassica carinata HOM05D005516 ORTHO05D006713 7.6e-22 107.8 89 57.3
Nitab4.5_0000404g0040 Nicotiana tabacum HOM05D005516 ORTHO05D006713 7.6e-22 107.8 73 67.1
unitig_0.g583 Utricularia gibba HOM05D005516 ORTHO05D006713 1.3e-21 107.1 81 64.2
Aqoxy1G00508 Aquilegia oxysepala HOM05D005516 ORTHO05D006713 8.4e-21 104.4 75 65.3
Cpa.g.sc161.38 Carica papaya HOM05D005516 ORTHO05D006713 1.2e-19 100.5 92 53.3
Lalb_Chr24g0401101 Lupinus albus HOM05D005516 ORTHO05D006713 2.7e-19 99.4 62 74.2
Gohir.A13G161100 Gossypium hirsutum HOM05D005516 ORTHO05D006713 6.7e-18 94.7 98 49.0
Gohir.D13G166400 Gossypium hirsutum HOM05D005516 ORTHO05D006713 6.7e-18 94.7 77 57.1
Gohir.D02G044500 Gossypium hirsutum HOM05D005516 ORTHO05D006713 8.7e-18 94.4 79 65.8
Sed0000674 Sechium edule HOM05D005516 ORTHO05D006713 1.6e-16 90.1 91 53.8
Mapoly0020s0169 Marchantia polymorpha HOM05D005516 ORTHO05D006713 6.2e-16 88.2 109 45.0
Actinidia07963 Actinidia chinensis HOM05D005516 ORTHO05D006713 6.9e-15 84.7 114 45.6
SalBow6G3354 Salvia bowleyana HOM05D005516 ORTHO05D006713 5.8e-14 81.6 52 65.4
Peaxi162Scf00575g00620 Petunia axillaris HOM05D005516 ORTHO05D006713 7.6e-14 81.3 67 58.2
CBR_g28089 Chara braunii HOM05D005516 ORTHO05D006713 1.3e-13 80.5 64 71.9
TAR633G1766 Trochodendron aralioides HOM05D005516 ORTHO05D006713 4.9e-13 78.6 109 42.2
Gohir.A06G040900 Gossypium hirsutum HOM05D005516 ORTHO05D006713 8.4e-13 77.8 59 59.3
Gohir.D05G109301 Gossypium hirsutum HOM05D005516 ORTHO05D006713 8.4e-13 77.8 59 59.3
BcaC03g15036 Brassica carinata HOM05D005516 ORTHO05D006713 1.2e-11 73.9 44 68.2
BolC2t08658H Brassica oleracea HOM05D005516 ORTHO05D006713 1.2e-11 73.9 44 68.2
Oeu029775.1 Olea europaea HOM05D005516 ORTHO05D006713 1.0e-10 70.9 53 58.5
Ciclev10013836m.g Citrus clementina HOM05D005516 ORTHO05D006713 6.7e-10 68.2 57 52.6
SMO367G1142 Selaginella moellendorffii HOM05D005516 ORTHO05D006713 2.2e-08 63.2 39 69.2
Nn6g32378 Nelumbo nucifera HOM05D005516 ORTHO05D006713 6.3e-08 61.6 95 42.1


User provided reference genes

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