Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0481 Ceratophyllum demersum HOM05D007902 ORTHO05D009839 5.7e-124 447.6 226 100.0
Dinv21823 Davidia involucrata HOM05D007902 ORTHO05D009839 4.4e-23 112.5 125 46.4
Cc02_g05590 Coffea canephora HOM05D007902 ORTHO05D009839 2.2e-22 110.2 128 49.2
Hma1.2p1_0292F.1_g115760 Hydrangea macrophylla HOM05D007902 ORTHO05D009839 8.2e-22 108.2 138 44.2
Actinidia07804 Actinidia chinensis HOM05D007902 ORTHO05D009839 7.0e-21 105.1 125 47.2
TAR623G0347 Trochodendron aralioides HOM05D007902 ORTHO05D009839 9.1e-21 104.8 123 49.6
CAN.G591.5 Capsicum annuum HOM05D007902 ORTHO05D009839 6.5e-19 98.6 127 45.7
Nn2g10362 Nelumbo nucifera HOM05D007902 ORTHO05D009839 8.5e-19 98.2 124 46.0
Lsat_1_v5_gn_9_59200 Lactuca sativa HOM05D007902 ORTHO05D009839 3.2e-18 96.3 132 45.5
HanXRQChr09g0251491 Helianthus annuus HOM05D007902 ORTHO05D009839 4.2e-18 95.9 125 45.6
Peaxi162Scf00464g00015 Petunia axillaris HOM05D007902 ORTHO05D009839 5.5e-18 95.5 129 45.7
Migut.F00588 Erythranthe guttata HOM05D007902 ORTHO05D009839 9.4e-18 94.7 128 46.9
Eucgr.G03123 Eucalyptus grandis HOM05D007902 ORTHO05D009839 4.7e-17 92.4 132 42.4
QL08p064506 Quercus lobata HOM05D007902 ORTHO05D009839 4.7e-17 92.4 130 45.4
Nitab4.5_0002713g0030 Nicotiana tabacum HOM05D007902 ORTHO05D009839 1.0e-16 91.3 125 46.4
Rhsim09G0183800 Rhododendron simsii HOM05D007902 ORTHO05D009839 1.0e-16 91.3 126 40.5
Sopen06g015820 Solanum pennellii HOM05D007902 ORTHO05D009839 1.4e-16 90.9 127 45.7
Manes.07G138200 Manihot esculenta HOM05D007902 ORTHO05D009839 3.0e-16 89.7 124 44.4
Nitab4.5_0000263g0270 Nicotiana tabacum HOM05D007902 ORTHO05D009839 2.6e-15 86.7 123 45.5
Cpa.g.sc19.89 Carica papaya HOM05D007902 ORTHO05D009839 1.3e-14 84.3 126 38.1
Oeu054429.1 Olea europaea HOM05D007902 ORTHO05D009839 2.2e-14 83.6 121 41.3
Sabra19G0058600 Salix brachista HOM05D007902 ORTHO05D009839 2.2e-14 83.6 124 41.9
vmacro09979 Vaccinium macrocarpon HOM05D007902 ORTHO05D009839 2.8e-14 83.2 113 40.7
Aqoxy4G02352 Aquilegia oxysepala HOM05D007902 ORTHO05D009839 1.1e-13 81.3 148 35.8
Ciclev10032767m.g Citrus clementina HOM05D007902 ORTHO05D009839 1.4e-13 80.9 127 40.2
Gohir.D13G005400 Gossypium hirsutum HOM05D007902 ORTHO05D009839 1.8e-13 80.5 124 39.5
Gorai.013G006100 Gossypium raimondii HOM05D007902 ORTHO05D009839 1.8e-13 80.5 124 39.5
Potri.019G049100 Populus trichocarpa HOM05D007902 ORTHO05D009839 3.1e-13 79.7 124 41.1
CiPaw.01G304600 Carya illinoinensis HOM05D007902 ORTHO05D009839 7.0e-13 78.6 132 39.4
Haze_17334 Corylus avellana HOM05D007902 ORTHO05D009839 7.0e-13 78.6 134 38.8
Gohir.A13G005700 Gossypium hirsutum HOM05D007902 ORTHO05D009839 1.6e-12 77.4 124 39.5
PSO017G6410 Papaver somniferum HOM05D007902 ORTHO05D009839 2.0e-12 77.0 176 34.1
Prupe.2G261300 Prunus persica HOM05D007902 ORTHO05D009839 2.0e-12 77.0 128 39.8
unitig_52.g16781 Utricularia gibba HOM05D007902 ORTHO05D009839 2.0e-12 77.0 142 38.0
SalBow5G2004 Salvia bowleyana HOM05D007902 ORTHO05D009839 4.5e-12 75.9 124 39.5
BcaB05g21722 Brassica carinata HOM05D007902 ORTHO05D009839 5.9e-12 75.5 128 38.3
CANSAT56G3130 Cannabis sativa HOM05D007902 ORTHO05D009839 1.0e-11 74.7 106 42.5
TWI53G0910 Tripterygium wilfordii HOM05D007902 ORTHO05D009839 1.0e-11 74.7 104 43.3
BraA02t04842Z Brassica rapa HOM05D007902 ORTHO05D009839 1.3e-11 74.3 126 37.3
FAN03G2841 Fragaria x ananassa HOM05D001122 ORTHO05D001877 1.7e-11 73.9 137 38.0
FvH4_7g25601 Fragaria vesca HOM05D007902 ORTHO05D009839 2.2e-11 73.6 132 38.6
FAN06G1561 Fragaria x ananassa HOM05D007902 ORTHO05D009839 2.2e-11 73.6 128 36.7
Atru.chr12.150 Acer truncatum HOM05D005928 ORTHO05D007500 3.8e-11 72.8 145 34.5
arahy.Tifrunner.gnm1.ann1.C7E7HV Arachis hypogaea HOM05D007902 ORTHO05D009839 3.8e-11 72.8 127 37.0
COL.COLO4_26867 Corchorus olitorius HOM05D005928 ORTHO05D007500 6.5e-11 72.0 133 36.8
arahy.Tifrunner.gnm1.ann1.0H4UJT Arachis hypogaea HOM05D007902 ORTHO05D009839 8.5e-11 71.6 127 36.2
Ca_06023_v3 Cicer arietinum L. HOM05D007902 ORTHO05D009839 8.5e-11 71.6 131 38.9
PGSC0003DMG400029078 Solanum tuberosum HOM05D007902 ORTHO05D009839 1.1e-10 71.2 82 47.6
BraA10t45132Z Brassica rapa HOM05D007902 ORTHO05D009839 1.9e-10 70.5 129 38.8
FAN01G1070 Fragaria x ananassa HOM05D001122 ORTHO05D001877 1.9e-10 70.5 125 36.8
EL10Ac2g04265 Beta vulgaris HOM05D007902 ORTHO05D009839 2.5e-10 70.1 134 38.8
C09p71380 Brassica napus HOM05D007902 ORTHO05D009839 3.2e-10 69.7 130 38.5
BolC9t59901H Brassica oleracea HOM05D007902 ORTHO05D009839 3.2e-10 69.7 129 37.2
BcaC03g13156 Brassica carinata HOM05D007902 ORTHO05D009839 7.2e-10 68.6 126 36.5
MD01G1163300 Malus domestica HOM05D007902 ORTHO05D009839 1.2e-09 67.8 118 39.0
Hund13474 Selenicereus undatus HOM05D007902 ORTHO05D009839 1.2e-09 67.8 155 31.6
C02p02280 Brassica napus HOM05D007902 ORTHO05D009839 2.1e-09 67.0 126 35.7
MBI03_g40382_MAGBIO Magnolia biondii HOM05D034203 ORTHO05D009839 2.1e-09 67.0 72 50.0
BcaC06g32241 Brassica carinata HOM05D007902 ORTHO05D009839 3.6e-09 66.2 130 36.9
Carub.0006s0425 Capsella rubella HOM05D007902 ORTHO05D009839 6.1e-09 65.5 129 35.7
Psat1g014880 Pisum sativum HOM05D007902 ORTHO05D009839 8.0e-09 65.1 105 38.1
RcHm_v2.0_Chr1g0371741 Rosa chinensis HOM05D007902 ORTHO05D009839 8.0e-09 65.1 120 36.7
Thecc.10G175100 Theobroma cacao HOM05D007902 ORTHO05D009839 8.0e-09 65.1 124 38.7
Medtr0191s0020 Medicago truncatula HOM05D007902 ORTHO05D009839 1.0e-08 64.7 111 36.0
CARHR207920 Cardamine hirsuta HOM05D007902 ORTHO05D009839 1.4e-08 64.3 130 35.4
PGR142G4074 Punica granatum HOM05D007902 ORTHO05D009839 1.4e-08 64.3 157 36.3
Sp6g37500 Schrenkiella parvula HOM05D007902 ORTHO05D009839 1.4e-08 64.3 126 37.3
AT5G05330 Arabidopsis thaliana HOM05D007902 ORTHO05D009839 3.0e-08 63.2 128 33.6
Lj1C1068T20 Lonicera japonica HOM05D007902 ORTHO05D009839 3.0e-08 63.2 76 43.4
SGA_v2.0_scaffold60G20910 Striga asiatica HOM05D005928 ORTHO05D007500 4.0e-08 62.8 74 47.3
PSO407G0011 Papaver somniferum HOM05D007902 ORTHO05D009839 5.2e-08 62.4 131 34.4
MD07G1231300 Malus domestica HOM05D007902 ORTHO05D009839 1.5e-07 60.8 121 34.7
Lj1A965T42 Lonicera japonica HOM05D007902 ORTHO05D009839 3.4e-07 59.7 76 40.8
BolC2t06195H Brassica oleracea HOM05D007902 ORTHO05D009839 5.7e-07 58.9 126 34.1
Thhalv10014946m.g Eutrema salsugineum HOM05D007902 ORTHO05D009839 1.3e-06 57.8 108 35.2
LjContig00357g0001230 Lotus japonicus HOM05D007902 ORTHO05D009839 8.3e-06 55.1 134 30.6


User provided reference genes

Program Settings