Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0464 Ceratophyllum demersum HOM05D003801 ORTHO05D004812 7.9e-83 310.5 163 100.0
CDE07G0188 Ceratophyllum demersum HOM05D003801 ORTHO05D004812 3.4e-70 268.5 201 77.1
CDE04G3388 Ceratophyllum demersum HOM05D003801 ORTHO05D004812 1.1e-68 263.5 165 88.5
Nn5g27878 Nelumbo nucifera HOM05D003801 ORTHO05D004812 6.5e-53 211.1 163 71.2
TAR623G1445 Trochodendron aralioides HOM05D003801 ORTHO05D004812 1.9e-52 209.5 163 71.2
Nn1g08532 Nelumbo nucifera HOM05D003801 ORTHO05D004812 3.2e-52 208.8 163 71.2
PGR004G1069 Punica granatum HOM05D003801 ORTHO05D004812 4.2e-52 208.4 163 70.6
Dinv28708 Davidia involucrata HOM05D003801 ORTHO05D004812 9.4e-52 207.2 164 70.1
Duzib168G2305 Durio zibethinus HOM05D003801 ORTHO05D004812 1.2e-51 206.8 163 68.1
Peaxi162Scf00095g00168 Petunia axillaris HOM05D003801 ORTHO05D004812 2.1e-51 206.1 163 68.1
Cpa.g.sc173.16 Carica papaya HOM05D003801 ORTHO05D004812 4.7e-51 204.9 163 66.9
Prupe.6G045000 Prunus persica HOM05D003801 ORTHO05D004812 4.7e-51 204.9 163 68.7
Sc17g0002560 Simmondsia chinensis HOM05D003801 ORTHO05D004812 4.7e-51 204.9 165 67.9
CANSAT54G0450 Cannabis sativa HOM05D003801 ORTHO05D004812 3.0e-50 202.2 163 68.1
Aqoxy2G00749 Aquilegia oxysepala HOM05D003801 ORTHO05D004812 3.9e-50 201.8 163 68.1
Manes.18G140750 Manihot esculenta HOM05D003801 ORTHO05D004812 3.9e-50 201.8 163 67.5
CiPaw.13G066600 Carya illinoinensis HOM05D003801 ORTHO05D004812 5.2e-50 201.4 163 68.1
AUR62036227 Chenopodium quinoa HOM05D003801 ORTHO05D004812 5.2e-50 201.4 163 68.1
Thecc.09G360800 Theobroma cacao HOM05D003801 ORTHO05D004812 5.2e-50 201.4 163 66.9
Glyma.14G201500 Glycine max HOM05D003801 ORTHO05D004812 6.7e-50 201.1 163 66.3
TAR369G0201 Trochodendron aralioides HOM05D003801 ORTHO05D004812 6.7e-50 201.1 163 69.3
ClCG03G000210 Citrullus lanatus HOM05D003801 ORTHO05D004812 8.8e-50 200.7 164 67.7
Atru.chr1.2566 Acer truncatum HOM05D003801 ORTHO05D004812 1.1e-49 200.3 163 66.9
Atru.chr1.2574 Acer truncatum HOM05D003801 ORTHO05D004812 1.1e-49 200.3 163 66.9
Gohir.D03G144200 Gossypium hirsutum HOM05D003801 ORTHO05D004812 1.1e-49 200.3 163 66.9
Gorai.003G151500 Gossypium raimondii HOM05D003801 ORTHO05D004812 1.1e-49 200.3 163 66.9
GSVIVG01024601001 Vitis vinifera HOM05D003801 ORTHO05D004812 2.0e-49 199.5 163 69.3
Sed0013919 Sechium edule HOM05D003801 ORTHO05D004812 3.3e-49 198.7 163 66.3
MSTRG.18544 Avicennia marina HOM05D003801 ORTHO05D004812 4.4e-49 198.4 163 65.6
CSS0002946 Camellia sinensis var. sinensis HOM05D003801 ORTHO05D004812 4.4e-49 198.4 163 66.9
AUR62009720 Chenopodium quinoa HOM05D003801 ORTHO05D004812 4.4e-49 198.4 163 67.5
Gohir.A03G024300 Gossypium hirsutum HOM05D003801 ORTHO05D004812 4.4e-49 198.4 163 66.9
Haze_24439 Corylus avellana HOM05D003801 ORTHO05D004812 7.4e-49 197.6 163 67.5
Sabra19G0125000 Salix brachista HOM05D003801 ORTHO05D004812 7.4e-49 197.6 163 65.6
Sabra19G0130000 Salix brachista HOM05D003801 ORTHO05D004812 7.4e-49 197.6 163 65.6
CsaV3_1G036690 Cucumis sativus L. HOM05D003801 ORTHO05D004812 9.7e-49 197.2 163 66.9
Eucgr.B04013 Eucalyptus grandis HOM05D003801 ORTHO05D004812 9.7e-49 197.2 163 65.6
Potri.013G154300 Populus trichocarpa HOM05D003801 ORTHO05D004812 9.7e-49 197.2 163 65.0
DCAR_028861 Daucus carota HOM05D003801 ORTHO05D004812 1.3e-48 196.8 164 67.1
MD03G1058800 Malus domestica HOM05D003801 ORTHO05D004812 1.3e-48 196.8 163 66.9
Glyma.02G233700 Glycine max HOM05D003801 ORTHO05D004812 1.7e-48 196.4 163 64.4
Hma1.2p1_1637F.1_g294880 Hydrangea macrophylla HOM05D003801 ORTHO05D004812 1.7e-48 196.4 163 66.9
TWI75G1891 Tripterygium wilfordii HOM05D003801 ORTHO05D004812 1.7e-48 196.4 163 66.3
Sopen09g014770 Solanum pennellii HOM05D003801 ORTHO05D004812 2.2e-48 196.1 163 66.3
Cfa011800 Carpinus fangiana HOM05D003801 ORTHO05D004812 2.8e-48 195.7 163 66.9
QL01p018072 Quercus lobata HOM05D003801 ORTHO05D004812 3.7e-48 195.3 162 66.0
EL10Ac7g15867 Beta vulgaris HOM05D003801 ORTHO05D004812 4.8e-48 194.9 163 66.9
CAN.G1702.5 Capsicum annuum HOM05D003801 ORTHO05D004812 4.8e-48 194.9 163 65.0
FvH4_3g40080 Fragaria vesca HOM05D003801 ORTHO05D004812 4.8e-48 194.9 163 67.5
FAN16G2780 Fragaria x ananassa HOM05D003801 ORTHO05D004812 4.8e-48 194.9 163 67.5
RcHm_v2.0_Chr5g0072271 Rosa chinensis HOM05D003801 ORTHO05D004812 4.8e-48 194.9 163 67.5
Solyc09g031780.3 Solanum lycopersicum HOM05D003801 ORTHO05D004812 4.8e-48 194.9 163 65.6
Sabra13G0124100 Salix brachista HOM05D003801 ORTHO05D004812 6.3e-48 194.5 163 63.8
Hund05047 Selenicereus undatus HOM05D003801 ORTHO05D004812 6.3e-48 194.5 162 66.7
A08p35840 Brassica napus HOM05D003801 ORTHO05D004812 8.2e-48 194.1 165 66.1
C08p02740 Brassica napus HOM05D003801 ORTHO05D004812 8.2e-48 194.1 165 66.1
BraA08t35491Z Brassica rapa HOM05D003801 ORTHO05D004812 8.2e-48 194.1 165 66.1
MELO3C020500.2 Cucumis melo HOM05D003801 ORTHO05D004812 8.2e-48 194.1 163 66.3
Migut.D00836 Erythranthe guttata HOM05D003801 ORTHO05D004812 8.2e-48 194.1 164 64.6
ECA247G0395 Erigeron canadensis HOM05D003801 ORTHO05D004812 1.1e-47 193.7 164 64.6
TWI79G0650 Tripterygium wilfordii HOM05D003801 ORTHO05D004812 1.1e-47 193.7 163 65.6
Potri.019G127000 Populus trichocarpa HOM05D003801 ORTHO05D004812 1.4e-47 193.4 163 63.2
Carub.0001s0624 Capsella rubella HOM05D003801 ORTHO05D004812 2.4e-47 192.6 165 64.2
LjContig00141g0011314 Lotus japonicus HOM05D003801 ORTHO05D004812 2.4e-47 192.6 163 66.9
BcaC05g24660 Brassica carinata HOM05D003801 ORTHO05D004812 3.1e-47 192.2 165 65.5
BolC5t29277H Brassica oleracea HOM05D003801 ORTHO05D004812 3.1e-47 192.2 165 65.5
Oeu044915.1 Olea europaea HOM05D003801 ORTHO05D004812 4.1e-47 191.8 163 64.4
VMungo0647G2088 Vigna mungo HOM05D003801 ORTHO05D004812 5.3e-47 191.4 163 62.6
BcaB02g06769 Brassica carinata HOM05D003801 ORTHO05D004812 7.0e-47 191.0 165 65.5
Sp1g05660 Schrenkiella parvula HOM05D003801 ORTHO05D004812 9.1e-47 190.7 166 64.5
A10p05480 Brassica napus HOM05D003801 ORTHO05D004812 1.6e-46 189.9 165 64.8
BraA10t42811Z Brassica rapa HOM05D003801 ORTHO05D004812 1.6e-46 189.9 165 64.8
HanXRQChr08g0228441 Helianthus annuus HOM05D003801 ORTHO05D004812 1.6e-46 189.9 164 62.8
arahy.Tifrunner.gnm1.ann1.WCY7KD Arachis hypogaea HOM05D003801 ORTHO05D004812 2.0e-46 189.5 163 63.2
BolC8t47069H Brassica oleracea HOM05D003801 ORTHO05D004812 2.0e-46 189.5 162 65.4
AL1G16990 Arabidopsis lyrata HOM05D003801 ORTHO05D004812 2.6e-46 189.1 165 63.6
Cc01_g15070 Coffea canephora HOM05D003801 ORTHO05D004812 3.5e-46 188.7 166 65.1
Phvul.008G250000 Phaseolus vulgaris HOM05D003801 ORTHO05D004812 3.5e-46 188.7 163 62.6
arahy.Tifrunner.gnm1.ann1.Z7TKRX Arachis hypogaea HOM05D003801 ORTHO05D004812 4.5e-46 188.3 163 62.6
Medtr3g466170 Medicago truncatula HOM05D003801 ORTHO05D004812 4.5e-46 188.3 163 63.8
FAN11G2663 Fragaria x ananassa HOM05D003801 ORTHO05D004812 5.9e-46 188.0 145 70.3
Ca_13017_v3 Cicer arietinum L. HOM05D003801 ORTHO05D004812 1.0e-45 187.2 163 60.7
Aa31LG5G6380 Aethionema arabicum HOM05D003801 ORTHO05D004812 1.3e-45 186.8 166 63.3
FAN21G1607 Fragaria x ananassa HOM05D003801 ORTHO05D004812 1.3e-45 186.8 145 70.3
PSO384G0852 Papaver somniferum HOM05D003801 ORTHO05D004812 1.3e-45 186.8 163 64.4
Glyma.18G055700 Glycine max HOM05D003801 ORTHO05D004812 1.7e-45 186.4 163 63.2
Psat2g052760 Pisum sativum HOM05D003801 ORTHO05D004812 2.2e-45 186.0 163 64.4
Rhsim13G0062300 Rhododendron simsii HOM05D003801 ORTHO05D004812 2.2e-45 186.0 163 64.4
MSTRG.17901 Avicennia marina HOM05D003801 ORTHO05D004812 2.9e-45 185.7 163 63.8
Thhalv10006671m.g Eutrema salsugineum HOM05D003801 ORTHO05D004812 3.8e-45 185.3 165 62.4
Dinv12256 Davidia involucrata HOM05D003801 ORTHO05D004812 5.0e-45 184.9 148 68.9
Lalb_Chr10g0103681 Lupinus albus HOM05D003801 ORTHO05D004812 5.0e-45 184.9 163 64.4
Lj1A123G49 Lonicera japonica HOM05D003801 ORTHO05D004812 6.5e-45 184.5 164 64.6
CARHR006620 Cardamine hirsuta HOM05D003801 ORTHO05D004812 8.5e-45 184.1 165 63.0
Lsat_1_v5_gn_9_14381 Lactuca sativa HOM05D003801 ORTHO05D004812 8.5e-45 184.1 167 61.7
PSO339G1799 Papaver somniferum HOM05D003801 ORTHO05D004812 8.5e-45 184.1 163 63.8
AT1G06950 Arabidopsis thaliana HOM05D003801 ORTHO05D004812 1.9e-44 183.0 165 62.4
Sabra19G0125100 Salix brachista HOM05D003801 ORTHO05D004812 2.5e-44 182.6 149 65.8
Ca_05689_v3 Cicer arietinum L. HOM05D003801 ORTHO05D004812 7.2e-44 181.0 163 60.7
Medtr5g074690 Medicago truncatula HOM05D003801 ORTHO05D004812 9.4e-44 180.6 163 63.8
TPR.G24942 Trifolium pratense HOM05D003801 ORTHO05D004812 9.4e-44 180.6 163 59.5
Actinidia32598 Actinidia chinensis HOM05D003801 ORTHO05D004812 4.7e-43 178.3 162 64.8
vmacro02901 Vaccinium macrocarpon HOM05D003801 ORTHO05D004812 6.1e-43 177.9 163 61.3
ATR0584G141 Amborella trichopoda HOM05D003801 ORTHO05D004812 8.0e-43 177.6 164 62.8
FAN25G2625 Fragaria x ananassa HOM05D003801 ORTHO05D004812 8.0e-43 177.6 143 67.8
Psat5g150840 Pisum sativum HOM05D003801 ORTHO05D004812 2.0e-41 172.9 163 58.3
unitig_747.g21451 Utricularia gibba HOM05D003801 ORTHO05D004812 7.5e-41 171.0 143 64.3
MD11G1060900 Malus domestica HOM05D003801 ORTHO05D004812 7.0e-39 164.5 161 60.9
Cc01_g14940 Coffea canephora HOM05D003801 ORTHO05D004812 2.7e-38 162.5 154 60.4
Mapoly0002s0142 Marchantia polymorpha HOM05D003801 ORTHO05D004812 2.7e-38 162.5 166 54.8
SEGI_40714 Sequoiadendron giganteum HOM05D003801 ORTHO05D004812 1.0e-37 160.6 164 53.0
SGA_v2.0_scaffold20G09298 Striga asiatica HOM05D003801 ORTHO05D004812 1.3e-37 160.2 163 54.6
TPR.G17744 Trifolium pratense HOM05D003801 ORTHO05D004812 3.8e-37 158.7 163 58.3
Pp3c14_10270 Physcomitrium patens HOM05D003801 ORTHO05D004812 8.5e-37 157.5 164 52.4
Zm00001eb044910 Zea mays HOM05D003801 ORTHO05D004812 2.5e-36 156.0 159 56.6
Pp3c17_6540 Physcomitrium patens HOM05D003801 ORTHO05D004812 4.2e-36 155.2 164 51.8
COL.COLO4_11183 Corchorus olitorius HOM05D003801 ORTHO05D004812 3.6e-35 152.1 111 72.1
Sabra19G0125200 Salix brachista HOM05D003801 ORTHO05D004812 1.4e-34 150.2 163 55.8
SHI19243 Sapria himalayana HOM05D003801 ORTHO05D004812 2.7e-30 136.0 164 45.1
QL05p056751 Quercus lobata HOM05D003801 ORTHO05D004812 1.3e-29 133.7 161 49.7
Hma1.2p1_0613F.1_g189200 Hydrangea macrophylla HOM05D003801 ORTHO05D004812 1.9e-28 129.8 141 52.5
QL05p055919 Quercus lobata HOM05D003801 ORTHO05D004812 1.9e-28 129.8 161 48.4
Hma1.2p1_1586F.1_g292110 Hydrangea macrophylla HOM05D003801 ORTHO05D004812 6.8e-26 121.3 162 48.1
SMO347G0592 Selaginella moellendorffii HOM05D003801 ORTHO05D004812 5.7e-25 118.2 160 43.1
CBR_g29785 Chara braunii HOM05D003801 ORTHO05D004812 2.8e-24 115.9 166 41.0
Eucgr.I01027 Eucalyptus grandis HOM05D003801 ORTHO05D004812 9.2e-23 110.9 82 72.0
C05p05030 Brassica napus HOM05D001129 ORTHO05D003814 6.1e-19 98.2 83 60.2
HPP92_014541 Vanilla planifolia HOM05D003801 ORTHO05D004812 1.9e-15 86.7 76 61.8
Lj6A615T91 Lonicera japonica HOM05D003801 ORTHO05D004812 1.6e-14 83.6 76 61.8
MCO16G620 Micromonas commoda HOM05D003801 ORTHO05D004812 9.5e-12 74.3 145 31.7
Ciclev10000209m.g Citrus clementina HOM05D003801 ORTHO05D004812 1.3e-08 63.9 40 80.0
PRCOL_00000154 Prasinoderma coloniale HOM05D003801 ORTHO05D004812 3.5e-06 55.8 160 30.0
Actinidia23183 Actinidia chinensis HOM05D003801 ORTHO05D057972 6.0e-06 55.1 49 57.1


User provided reference genes

Program Settings