Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0425 Ceratophyllum demersum HOM05D000421 ORTHO05D130678 1.3e-41 172.6 85 100.0
TAR371G0793 Trochodendron aralioides HOM05D000421 ORTHO05D001007 1.5e-13 79.3 83 47.0
Nn4g24999 Nelumbo nucifera HOM05D000421 ORTHO05D001007 1.1e-11 73.2 80 47.5
MSTRG.14693 Avicennia marina HOM05D000421 ORTHO05D001007 3.2e-11 71.6 81 40.7
TAR626G0375 Trochodendron aralioides HOM05D000421 ORTHO05D001007 2.1e-10 68.9 81 44.4
ATR0124G010 Amborella trichopoda HOM05D000421 ORTHO05D001007 2.7e-10 68.6 80 45.0
MBI06_g17207_MAGBIO Magnolia biondii HOM05D000421 ORTHO05D001007 3.0e-09 65.1 116 34.5
Eucgr.E03369 Eucalyptus grandis HOM05D000421 ORTHO05D001007 5.1e-09 64.3 84 42.9
Hund23641 Selenicereus undatus HOM05D000421 ORTHO05D001007 6.7e-09 63.9 79 41.8
QL05p038169 Quercus lobata HOM05D000421 ORTHO05D001007 1.1e-08 63.2 75 38.7
SEGI_01881 Sequoiadendron giganteum HOM05D000421 ORTHO05D001007 2.5e-08 62.0 103 34.0
MSTRG.7325 Avicennia marina HOM05D000421 ORTHO05D001007 3.3e-08 61.6 85 38.8
Hund21264 Selenicereus undatus HOM05D000421 ORTHO05D001007 4.3e-08 61.2 79 38.0
Ah.09g235920 Amaranthus hybridus HOM05D000421 ORTHO05D001007 7.4e-08 60.5 73 41.1
Nitab4.5_0003114g0040 Nicotiana tabacum HOM05D000421 ORTHO05D001007 9.7e-08 60.1 82 39.0
Sed0016011 Sechium edule HOM05D000421 ORTHO05D001007 9.7e-08 60.1 82 36.6
CiPaw.09G160400 Carya illinoinensis HOM05D000421 ORTHO05D001007 1.3e-07 59.7 81 35.8
Oeu050837.1 Olea europaea HOM05D000421 ORTHO05D001007 1.3e-07 59.7 73 45.2
TWI63G0757 Tripterygium wilfordii HOM05D000421 ORTHO05D001007 1.3e-07 59.7 84 36.9
Zm00001eb324450 Zea mays HOM05D000421 ORTHO05D001007 1.3e-07 59.7 79 39.2
CAN.G1705.5 Capsicum annuum HOM05D000421 ORTHO05D001007 1.7e-07 59.3 84 38.1
ClCG03G005610 Citrullus lanatus HOM05D000421 ORTHO05D001007 1.7e-07 59.3 86 38.4
Nn1g06692 Nelumbo nucifera HOM05D000421 ORTHO05D001007 1.7e-07 59.3 83 34.9
Atru.chr10.1975 Acer truncatum HOM05D000421 ORTHO05D001007 2.2e-07 58.9 84 39.3
Actinidia11799 Actinidia chinensis HOM05D000421 ORTHO05D001007 2.2e-07 58.9 84 40.5
MSTRG.15895 Avicennia marina HOM05D000421 ORTHO05D001007 2.2e-07 58.9 85 38.8
COL.COLO4_31547 Corchorus olitorius HOM05D000421 ORTHO05D001007 2.2e-07 58.9 81 35.8
CANSAT56G2788 Cannabis sativa HOM05D000421 ORTHO05D001007 2.8e-07 58.5 81 33.3
Sc17g0006460 Simmondsia chinensis HOM05D000421 ORTHO05D001007 2.8e-07 58.5 76 39.5
EL10Ac8g20637 Beta vulgaris HOM05D000421 ORTHO05D001007 3.7e-07 58.2 79 36.7
CAN.G132.7 Capsicum annuum HOM05D000421 ORTHO05D001007 3.7e-07 58.2 69 43.5
AUR62016927 Chenopodium quinoa HOM05D000421 ORTHO05D001007 3.7e-07 58.2 73 43.8
Duzib192G0335 Durio zibethinus HOM05D000421 ORTHO05D001007 3.7e-07 58.2 81 35.8
Migut.H01497 Erythranthe guttata HOM05D000421 ORTHO05D001007 3.7e-07 58.2 81 37.0
SGA_v2.0_scaffold159G37649 Striga asiatica HOM05D000421 ORTHO05D001007 3.7e-07 58.2 82 39.0
SGA_v2.0_scaffold22G09729 Striga asiatica HOM05D000421 ORTHO05D001007 3.7e-07 58.2 68 42.6
Zm00001eb107030 Zea mays HOM05D000421 ORTHO05D001007 3.7e-07 58.2 79 39.2
MD10G1300800 Malus domestica HOM05D000421 ORTHO05D001007 4.8e-07 57.8 84 35.7
Prupe.4G039600 Prunus persica HOM05D000421 ORTHO05D001007 6.3e-07 57.4 84 38.1
HPP92_000926 Vanilla planifolia HOM05D000421 ORTHO05D001007 6.3e-07 57.4 74 41.9
Potri.011G045300 Populus trichocarpa HOM05D000421 ORTHO05D001007 8.2e-07 57.0 75 38.7
Sabra11G0031500 Salix brachista HOM05D000421 ORTHO05D001007 8.2e-07 57.0 75 37.3
PGSC0003DMG400010826 Solanum tuberosum HOM05D000421 ORTHO05D001007 8.2e-07 57.0 78 35.9
Thecc.06G195400 Theobroma cacao HOM05D000421 ORTHO05D001007 8.2e-07 57.0 81 35.8
TWI38G0274 Tripterygium wilfordii HOM05D000421 ORTHO05D001007 8.2e-07 57.0 84 35.7
TAR627G0940 Trochodendron aralioides HOM05D000421 ORTHO05D001007 8.2e-07 57.0 81 38.3
CAN.G420.7 Capsicum annuum HOM05D000421 ORTHO05D001007 1.1e-06 56.6 68 42.6
Cfa000379 Carpinus fangiana HOM05D000421 ORTHO05D001007 1.1e-06 56.6 74 33.8
Nn1g03948 Nelumbo nucifera HOM05D000421 ORTHO05D001007 1.1e-06 56.6 83 37.3
Oeu031648.2 Olea europaea HOM05D000421 ORTHO05D000846 1.1e-06 56.6 74 39.2
Os07g0564800 Oryza sativa ssp. japonica HOM05D000421 ORTHO05D001007 1.1e-06 56.6 79 39.2
Nitab4.5_0006694g0020 Nicotiana tabacum HOM05D000421 ORTHO05D001007 1.4e-06 56.2 74 40.5
Sopen10g004950 Solanum pennellii HOM05D000421 ORTHO05D001007 1.4e-06 56.2 85 36.5
TAR624G1049 Trochodendron aralioides HOM05D000421 ORTHO05D001007 1.4e-06 56.2 81 34.6
AUR62014749 Chenopodium quinoa HOM05D000421 ORTHO05D001007 2.4e-06 55.5 73 41.1
MD05G1323000 Malus domestica HOM05D000421 ORTHO05D001007 2.4e-06 55.5 84 34.5
PSO541G3155 Papaver somniferum HOM05D000421 ORTHO05D001007 2.4e-06 55.5 83 38.6
PSO675G8455 Papaver somniferum HOM05D000421 ORTHO05D001007 2.4e-06 55.5 83 38.6
AL1G22190 Arabidopsis lyrata HOM05D000421 ORTHO05D001007 3.1e-06 55.1 84 36.9
Migut.M01158 Erythranthe guttata HOM05D000421 ORTHO05D001007 3.1e-06 55.1 66 36.4
SHI02003 Sapria himalayana HOM05D000421 ORTHO05D001007 3.1e-06 55.1 77 42.9
Sed0012713 Sechium edule HOM05D000421 ORTHO05D001007 3.1e-06 55.1 79 38.0
Solyc10g009170.2 Solanum lycopersicum HOM05D000421 ORTHO05D001007 3.1e-06 55.1 78 35.9
Manes.17G040800 Manihot esculenta HOM05D000421 ORTHO05D001007 4.1e-06 54.7 81 34.6
Carub.0001s1075 Capsella rubella HOM05D000421 ORTHO05D001007 6.9e-06 53.9 84 36.9
CsaV3_1G011870 Cucumis sativus L. HOM05D000421 ORTHO05D001007 6.9e-06 53.9 79 35.4
Glyma.07G191700 Glycine max HOM05D000421 ORTHO05D001007 6.9e-06 53.9 85 37.6
Peaxi162Scf00612g10027 Petunia axillaris HOM05D000421 ORTHO05D001007 6.9e-06 53.9 62 41.9
Potri.004G036800 Populus trichocarpa HOM05D000421 ORTHO05D001007 6.9e-06 53.9 81 33.3
Rhsim02G0120800 Rhododendron simsii HOM05D000421 ORTHO05D001007 6.9e-06 53.9 81 33.3
Lj6g0019466 Lotus japonicus HOM05D000421 ORTHO05D001007 9.1e-06 53.5 85 36.5
Peaxi162Scf00031g00715 Petunia axillaris HOM05D000421 ORTHO05D001007 9.1e-06 53.5 78 34.6


User provided reference genes

Program Settings