Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0419 Ceratophyllum demersum HOM05D003795 ORTHO05D004308 1.1e-249 866.3 490 100.0
CDE04G0398 Ceratophyllum demersum HOM05D003795 ORTHO05D004308 6.8e-37 159.5 633 30.5
MBI06_g17214_MAGBIO Magnolia biondii HOM05D003795 ORTHO05D004308 7.5e-36 156.0 472 36.0
CDE08G0767 Ceratophyllum demersum HOM05D003795 ORTHO05D004308 1.7e-35 154.8 591 31.3
Nn4g24995 Nelumbo nucifera HOM05D003795 ORTHO05D004308 5.5e-31 139.8 516 32.2
PSO063G2224 Papaver somniferum HOM05D003795 ORTHO05D004308 1.6e-30 138.3 510 32.7
Aqoxy3G04352 Aquilegia oxysepala HOM05D003795 ORTHO05D004308 1.4e-29 135.2 448 37.7
TAR629G1700 Trochodendron aralioides HOM05D003795 ORTHO05D004308 1.8e-29 134.8 448 35.9
Oeu012502.2 Olea europaea HOM05D003795 ORTHO05D004308 7.7e-25 119.4 518 30.7
PSO782G2347 Papaver somniferum HOM05D003795 ORTHO05D004308 7.7e-25 119.4 498 32.9
Os04g0528600 Oryza sativa ssp. japonica HOM05D003795 ORTHO05D004308 8.6e-24 115.9 473 32.3
Duzib138G1939 Durio zibethinus HOM05D003795 ORTHO05D004308 2.5e-23 114.4 588 30.3
GSVIVG01033197001 Vitis vinifera HOM05D003795 ORTHO05D004308 2.5e-23 114.4 498 30.5
Gohir.A11G170300 Gossypium hirsutum HOM05D003795 ORTHO05D004308 5.6e-23 113.2 561 31.4
Manes.01G125700 Manihot esculenta HOM05D003795 ORTHO05D004308 5.6e-23 113.2 562 32.2
Oeu041416.1 Olea europaea HOM05D003795 ORTHO05D004308 5.6e-23 113.2 545 29.9
Peaxi162Scf00344g00199 Petunia axillaris HOM05D003795 ORTHO05D004308 5.6e-23 113.2 531 33.9
Glyma.02G239000 Glycine max HOM05D003795 ORTHO05D004308 1.2e-22 112.1 581 27.5
Nitab4.5_0000483g0170 Nicotiana tabacum HOM05D003795 ORTHO05D004308 1.2e-22 112.1 603 29.7
Zm00001eb427110 Zea mays HOM05D003795 ORTHO05D004308 1.2e-22 112.1 479 32.2
Phvul.008G243000 Phaseolus vulgaris HOM05D003795 ORTHO05D004308 2.8e-22 110.9 573 29.5
SalBow5G4136 Salvia bowleyana HOM05D003795 ORTHO05D004308 2.8e-22 110.9 513 33.7
Nitab4.5_0012787g0030 Nicotiana tabacum HOM05D003795 ORTHO05D004308 4.7e-22 110.2 595 31.4
Gorai.007G189400 Gossypium raimondii HOM05D003795 ORTHO05D004308 8.0e-22 109.4 555 31.5
Gohir.D11G177300 Gossypium hirsutum HOM05D003795 ORTHO05D004308 1.0e-21 109.0 551 31.2
TWI77G0024 Tripterygium wilfordii HOM05D003795 ORTHO05D004308 1.0e-21 109.0 592 32.3
MELO3C025107.2 Cucumis melo HOM05D003795 ORTHO05D004308 1.8e-21 108.2 608 28.5
ClCG01G008410 Citrullus lanatus HOM05D003795 ORTHO05D004308 2.3e-21 107.8 633 31.4
unitig_0.g1678 Utricularia gibba HOM05D003795 ORTHO05D004308 2.3e-21 107.8 499 28.7
Psat2g048640 Pisum sativum HOM05D003795 ORTHO05D004308 4.0e-21 107.1 499 32.1
PGSC0003DMG400019727 Solanum tuberosum HOM05D003795 ORTHO05D004308 4.0e-21 107.1 574 30.5
VMungo0647G0124 Vigna mungo HOM05D003795 ORTHO05D004308 6.8e-21 106.3 566 29.3
CsaV3_5G024360 Cucumis sativus L. HOM05D003795 ORTHO05D004308 8.9e-21 105.9 630 30.3
TPR.G15394 Trifolium pratense HOM05D003795 ORTHO05D004308 8.9e-21 105.9 466 33.3
HanXRQChr14g0443551 Helianthus annuus HOM05D003795 ORTHO05D004308 1.2e-20 105.5 565 29.2
TWI74G0163 Tripterygium wilfordii HOM05D003795 ORTHO05D004308 1.2e-20 105.5 561 31.6
Zm00001eb075920 Zea mays HOM05D003795 ORTHO05D004308 1.2e-20 105.5 469 32.0
Sabra12G0109200 Salix brachista HOM05D003795 ORTHO05D004308 2.0e-20 104.8 492 30.7
VMungo0540G0009 Vigna mungo HOM05D003795 ORTHO05D004308 2.0e-20 104.8 610 31.1
Migut.K01203 Erythranthe guttata HOM05D003795 ORTHO05D004308 2.6e-20 104.4 525 29.9
Thecc.04G056400 Theobroma cacao HOM05D003795 ORTHO05D004308 2.6e-20 104.4 560 28.8
CSS0049356 Camellia sinensis var. sinensis HOM05D003795 ORTHO05D004308 4.4e-20 103.6 572 32.7
CAN.G809.93 Capsicum annuum HOM05D003795 ORTHO05D004308 4.4e-20 103.6 590 27.8
Nn4g24993 Nelumbo nucifera HOM05D003795 ORTHO05D004308 4.4e-20 103.6 548 29.7
Dinv28269 Davidia involucrata HOM05D003795 ORTHO05D004308 9.8e-20 102.4 588 31.3
FAN18G0662 Fragaria x ananassa HOM05D003795 ORTHO05D004308 6.4e-19 99.8 560 30.5
FAN18G1276 Fragaria x ananassa HOM05D003795 ORTHO05D004308 6.4e-19 99.8 560 30.5
vmacro20445 Vaccinium macrocarpon HOM05D003795 ORTHO05D004308 6.4e-19 99.8 578 31.0
QL02p056567 Quercus lobata HOM05D003795 ORTHO05D004308 8.3e-19 99.4 588 30.6
unitig_748.g7017 Utricularia gibba HOM05D003795 ORTHO05D004308 1.1e-18 99.0 495 28.7
arahy.Tifrunner.gnm1.ann1.686QXT Arachis hypogaea HOM05D003795 ORTHO05D004308 1.4e-18 98.6 615 30.2
Manes.02G083300 Manihot esculenta HOM05D003795 ORTHO05D004308 1.4e-18 98.6 552 30.4
Potri.012G145200 Populus trichocarpa HOM05D003795 ORTHO05D004308 1.4e-18 98.6 580 28.4
Sabra15G0156700 Salix brachista HOM05D003795 ORTHO05D004308 1.8e-18 98.2 596 28.9
Sopen02g026080 Solanum pennellii HOM05D003795 ORTHO05D004308 3.2e-18 97.4 544 31.4
Glyma.18G048000 Glycine max HOM05D003795 ORTHO05D004308 4.1e-18 97.1 574 32.8
FAN08G2134 Fragaria x ananassa HOM05D003795 ORTHO05D004308 5.4e-18 96.7 561 30.5
Lalb_Chr18g0053951 Lupinus albus HOM05D003795 ORTHO05D004308 5.4e-18 96.7 587 27.3
arahy.Tifrunner.gnm1.ann1.SLU9BZ Arachis hypogaea HOM05D003795 ORTHO05D004308 7.0e-18 96.3 608 30.9
Medtr5g076140 Medicago truncatula HOM05D003795 ORTHO05D004308 7.0e-18 96.3 514 32.9
Glyma.14G207900 Glycine max HOM05D003795 ORTHO05D004308 9.2e-18 95.9 600 26.8
FvH4_5g39710 Fragaria vesca HOM05D003795 ORTHO05D004308 1.2e-17 95.5 561 30.3
Nitab4.5_0008083g0010 Nicotiana tabacum HOM05D003795 ORTHO05D004308 1.2e-17 95.5 514 27.2
QL02p055515 Quercus lobata HOM05D003795 ORTHO05D004308 1.2e-17 95.5 536 31.5
Medtr3g063210 Medicago truncatula HOM05D003795 ORTHO05D004308 1.6e-17 95.1 516 27.1
Sed0021341 Sechium edule HOM05D003795 ORTHO05D004308 2.0e-17 94.7 578 29.4
DCAR_014135 Daucus carota HOM05D003795 ORTHO05D004308 2.7e-17 94.4 563 32.5
Rhsim10G0186600 Rhododendron simsii HOM05D003795 ORTHO05D004308 2.7e-17 94.4 543 30.8
Cpa.g.sc108.20 Carica papaya HOM05D003795 ORTHO05D004308 3.5e-17 94.0 539 30.8
Nitab4.5_0002297g0070 Nicotiana tabacum HOM05D003795 ORTHO05D004308 3.5e-17 94.0 543 27.4
HPP92_013140 Vanilla planifolia HOM05D003795 ORTHO05D004308 4.6e-17 93.6 506 28.5
Haze_14040 Corylus avellana HOM05D003795 ORTHO05D004308 7.8e-17 92.8 598 30.4
FAN04G0804 Fragaria x ananassa HOM05D003795 ORTHO05D004308 7.8e-17 92.8 568 27.5
Phvul.006G083400 Phaseolus vulgaris HOM05D003795 ORTHO05D004308 7.8e-17 92.8 586 30.7
Lj2A509T28 Lonicera japonica HOM05D003795 ORTHO05D004308 1.0e-16 92.4 598 31.1
SGA_v2.0_scaffold199G41250 Striga asiatica HOM05D003795 ORTHO05D004308 1.0e-16 92.4 519 31.4
Psat5g144840 Pisum sativum HOM05D003795 ORTHO05D004308 1.3e-16 92.0 507 30.0
Oeu060824.1 Olea europaea HOM05D003795 ORTHO05D004308 3.9e-16 90.5 481 28.1
AL2G22840 Arabidopsis lyrata HOM05D003795 ORTHO05D004308 5.0e-16 90.1 510 30.8
Carub.0002s1153 Capsella rubella HOM05D003795 ORTHO05D004308 1.1e-15 89.0 510 29.0
unitig_748.g8624 Utricularia gibba HOM05D003795 ORTHO05D004308 4.3e-15 87.0 457 29.3
Zm00001eb185660 Zea mays HOM05D003795 ORTHO05D004308 4.3e-15 87.0 399 30.3
Cc07_g12620 Coffea canephora HOM05D003795 ORTHO05D004308 5.6e-15 86.7 609 29.1
Hund22224 Selenicereus undatus HOM05D003795 ORTHO05D004308 5.6e-15 86.7 595 28.2
Thhalv10018468m.g Eutrema salsugineum HOM05D003795 ORTHO05D004308 7.3e-15 86.3 497 29.4
Lsat_1_v5_gn_2_72041 Lactuca sativa HOM05D003795 ORTHO05D004308 7.3e-15 86.3 547 31.3
RcHm_v2.0_Chr7g0242011 Rosa chinensis HOM05D003795 ORTHO05D004308 9.5e-15 85.9 571 29.6
Ca_05735_v3 Cicer arietinum L. HOM05D003795 ORTHO05D004308 2.8e-14 84.3 524 31.7
MSTRG.15619 Avicennia marina HOM05D003795 ORTHO05D004308 3.6e-14 84.0 583 27.4
Ca_15099_v3 Cicer arietinum L. HOM05D003795 ORTHO05D004308 4.7e-14 83.6 515 30.5
Potri.015G147900 Populus trichocarpa HOM05D003795 ORTHO05D004308 4.7e-14 83.6 601 28.0
COL.COLO4_13440 Corchorus olitorius HOM05D003795 ORTHO05D004308 6.2e-14 83.2 450 30.2
ECA238G3337 Erigeron canadensis HOM05D003795 ORTHO05D004308 6.2e-14 83.2 501 31.9
MSTRG.3665 Avicennia marina HOM05D003795 ORTHO05D004308 8.0e-14 82.8 573 30.5
LjContig00141g0025814 Lotus japonicus HOM05D003795 ORTHO05D004308 1.0e-13 82.4 576 32.3
Ah.04g162800 Amaranthus hybridus HOM05D003795 ORTHO05D004308 1.8e-13 81.6 635 27.6
AT1G65710 Arabidopsis thaliana HOM05D003795 ORTHO05D004308 1.8e-13 81.6 498 28.7
Actinidia32996 Actinidia chinensis HOM05D003795 ORTHO05D004308 3.1e-13 80.9 366 36.3
Solyc02g081440.4 Solanum lycopersicum HOM05D003795 ORTHO05D004308 5.2e-13 80.1 586 29.2
CANSAT78G1023 Cannabis sativa HOM05D003795 ORTHO05D004308 6.8e-13 79.7 586 30.0
BolC3t21550H Brassica oleracea HOM05D003795 ORTHO05D004308 1.5e-12 78.6 389 29.6
CARHR057540 Cardamine hirsuta HOM05D003795 ORTHO05D004308 1.5e-12 78.6 509 25.9
CARHR216000 Cardamine hirsuta HOM05D003795 ORTHO05D004308 2.6e-12 77.8 530 26.6
A08p00830 Brassica napus HOM05D003795 ORTHO05D004308 3.4e-12 77.4 381 29.9
CAN.G304.8 Capsicum annuum HOM05D003795 ORTHO05D004308 4.4e-12 77.0 481 26.6
PGR042G3398 Punica granatum HOM05D003795 ORTHO05D004308 7.5e-12 76.3 544 26.1
TPR.G37433 Trifolium pratense HOM05D003795 ORTHO05D004308 7.5e-12 76.3 545 28.1
Glyma.11G202800 Glycine max HOM05D003795 ORTHO05D004308 9.8e-12 75.9 550 30.5
Peaxi162Scf00784g00029 Petunia axillaris HOM05D003795 ORTHO05D004308 9.8e-12 75.9 493 26.4
THA.LOC104805668 Tarenaya hassleriana HOM05D003795 ORTHO05D004308 1.7e-11 75.1 530 25.7
Hma1.2p1_0085F.1_g043870 Hydrangea macrophylla HOM05D003795 ORTHO05D004308 2.2e-11 74.7 622 29.9
Hma1.2p1_0034F.1_g021500 Hydrangea macrophylla HOM05D003795 ORTHO05D004308 2.9e-11 74.3 592 29.6
BcaB04g16989 Brassica carinata HOM05D003795 ORTHO05D004308 6.4e-11 73.2 380 33.9
Oeu012503.1 Olea europaea HOM05D003795 ORTHO05D004308 8.3e-11 72.8 205 37.6
Lj6g0018352 Lotus japonicus HOM05D003795 ORTHO05D004308 1.1e-10 72.4 576 30.7
Sp5g20650 Schrenkiella parvula HOM05D003795 ORTHO05D004308 1.1e-10 72.4 449 30.3
HanXRQChr12g0365641 Helianthus annuus HOM05D003795 ORTHO05D004308 1.2e-09 68.9 356 30.6
Ciclev10011149m.g Citrus clementina HOM05D003795 ORTHO05D004308 4.6e-09 67.0 595 28.2
Sabra16G0322500 Salix brachista HOM05D003795 ORTHO05D004308 7.8e-09 66.2 273 32.2
Ah.06g191370 Amaranthus hybridus HOM05D003795 ORTHO05D004308 1.3e-08 65.5 593 29.0
BcaC01g01477 Brassica carinata HOM05D003795 ORTHO05D004308 1.7e-08 65.1 471 27.4
C03p92420 Brassica napus HOM05D003795 ORTHO05D004308 1.7e-08 65.1 471 27.4
Dinv19094 Davidia involucrata HOM05D003795 ORTHO05D004308 1.7e-08 65.1 300 29.7
Sopen02g011820 Solanum pennellii HOM05D003795 ORTHO05D004308 5.0e-08 63.5 487 26.1
Aqoxy2G03712 Aquilegia oxysepala HOM05D003795 ORTHO05D004308 3.3e-07 60.8 204 30.9
CiPaw.03G010000 Carya illinoinensis HOM05D003795 ORTHO05D004308 4.3e-07 60.5 559 28.4
VMungo1215G2457 Vigna mungo HOM05D003795 ORTHO05D004308 7.3e-07 59.7 296 30.4
Actinidia22883 Actinidia chinensis HOM05D003795 ORTHO05D004308 6.2e-06 56.6 516 29.8
AT5G37010 Arabidopsis thaliana HOM05D003795 ORTHO05D004308 8.1e-06 56.2 495 28.5


User provided reference genes

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