Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0413 Ceratophyllum demersum HOM05D001326 ORTHO05D004163 6.2e-71 270.8 147 100.0
CDE04G2550 Ceratophyllum demersum HOM05D001326 ORTHO05D004163 2.1e-42 176.0 147 72.1
Dinv35915 Davidia involucrata HOM05D000232 ORTHO05D004163 5.0e-20 101.7 169 44.4
CSS0008374 Camellia sinensis var. sinensis HOM05D001326 ORTHO05D004163 1.5e-19 100.1 119 51.3
Hma1.2p1_0634F.1_g192950 Hydrangea macrophylla HOM05D001326 ORTHO05D004163 5.5e-19 98.2 164 47.0
Actinidia38087 Actinidia chinensis HOM05D001326 ORTHO05D004163 2.8e-18 95.9 155 41.9
vmacro23170 Vaccinium macrocarpon HOM05D001326 ORTHO05D004163 4.7e-18 95.1 161 40.4
CAN.G1621.9 Capsicum annuum HOM05D001326 ORTHO05D004163 8.0e-18 94.4 136 46.3
TAR625G0613 Trochodendron aralioides HOM05D001326 ORTHO05D004163 1.0e-17 94.0 156 40.4
TAR381G1295 Trochodendron aralioides HOM05D001326 ORTHO05D004163 2.3e-17 92.8 138 44.9
PGR031G2476 Punica granatum HOM05D001326 ORTHO05D004163 3.0e-17 92.4 170 42.4
Nitab4.5_0000569g0170 Nicotiana tabacum HOM05D001326 ORTHO05D004163 4.0e-17 92.0 115 49.6
Nitab4.5_0004888g0020 Nicotiana tabacum HOM05D001326 ORTHO05D004163 1.5e-16 90.1 149 43.0
CAN.G107.48 Capsicum annuum HOM05D001326 ORTHO05D004163 2.0e-16 89.7 127 45.7
Nitab4.5_0011741g0010 Nicotiana tabacum HOM05D001326 ORTHO05D004163 2.0e-16 89.7 170 40.6
Psat0s3164g0120 Pisum sativum HOM05D001326 ORTHO05D004163 2.6e-16 89.4 151 44.4
Lj1g0010090 Lotus japonicus HOM05D001326 ORTHO05D004163 3.4e-16 89.0 145 44.1
Cc10_g05200 Coffea canephora HOM05D001326 ORTHO05D004163 5.7e-16 88.2 134 44.0
Glyma.14G086900 Glycine max HOM05D001326 ORTHO05D004163 7.5e-16 87.8 100 51.0
Ciclev10002480m.g Citrus clementina HOM05D001326 ORTHO05D004163 9.8e-16 87.4 96 52.1
Nitab4.5_0003035g0010 Nicotiana tabacum HOM05D001326 ORTHO05D004163 9.8e-16 87.4 170 40.0
Oeu016580.1 Olea europaea HOM05D001326 ORTHO05D004163 9.8e-16 87.4 122 46.7
Peaxi162Scf00219g00123 Petunia axillaris HOM05D001326 ORTHO05D004163 9.8e-16 87.4 129 43.4
Sed0004426 Sechium edule HOM05D001326 ORTHO05D004163 1.3e-15 87.0 131 45.8
CANSAT01G2404 Cannabis sativa HOM05D001326 ORTHO05D004163 1.7e-15 86.7 136 41.9
Lalb_Chr14g0368421 Lupinus albus HOM05D001326 ORTHO05D004163 1.7e-15 86.7 155 40.0
Prupe.1G429000 Prunus persica HOM05D001326 ORTHO05D004163 1.7e-15 86.7 152 42.1
RcHm_v2.0_Chr6g0308881 Rosa chinensis HOM05D001326 ORTHO05D004163 1.7e-15 86.7 127 44.9
ClCG05G020300 Citrullus lanatus HOM05D001326 ORTHO05D004163 2.2e-15 86.3 163 42.9
Lalb_Chr22g0354841 Lupinus albus HOM05D001326 ORTHO05D004163 2.2e-15 86.3 138 44.9
Glyma.17G237500 Glycine max HOM05D001326 ORTHO05D004163 2.8e-15 85.9 101 52.5
Atru.chr13.770 Acer truncatum HOM05D001326 ORTHO05D004163 3.7e-15 85.5 134 44.0
MD15G1075600 Malus domestica HOM05D001326 ORTHO05D004163 4.9e-15 85.1 161 40.4
Potri.002G122000 Populus trichocarpa HOM05D001326 ORTHO05D004163 4.9e-15 85.1 128 45.3
DCAR_012800 Daucus carota HOM05D001326 ORTHO05D004163 6.3e-15 84.7 132 44.7
Actinidia08267 Actinidia chinensis HOM05D001326 ORTHO05D004163 8.3e-15 84.3 137 42.3
CsaV3_4G034780 Cucumis sativus L. HOM05D001326 ORTHO05D004163 8.3e-15 84.3 166 39.8
FAN20G2280 Fragaria x ananassa HOM05D001326 ORTHO05D004163 8.3e-15 84.3 119 43.7
Lsat_1_v5_gn_6_109441 Lactuca sativa HOM05D001326 ORTHO05D004163 8.3e-15 84.3 131 44.3
BcaB07g33854 Brassica carinata HOM05D001326 ORTHO05D004163 1.1e-14 84.0 115 45.2
MELO3C016792.2 Cucumis melo HOM05D001326 ORTHO05D004163 1.1e-14 84.0 166 39.2
DCAR_008838 Daucus carota HOM05D001326 ORTHO05D004163 1.1e-14 84.0 134 41.0
Phvul.009G068700 Phaseolus vulgaris HOM05D001326 ORTHO05D004163 1.1e-14 84.0 161 40.4
Glyma.06G043700 Glycine max HOM05D001326 ORTHO05D004163 1.4e-14 83.6 135 43.7
Manes.18G042600 Manihot esculenta HOM05D001326 ORTHO05D004163 1.4e-14 83.6 122 46.7
Potri.014G021900 Populus trichocarpa HOM05D001326 ORTHO05D004163 1.4e-14 83.6 119 46.2
TWI09G1274 Tripterygium wilfordii HOM05D001326 ORTHO05D004163 1.8e-14 83.2 165 40.6
AUR62044632 Chenopodium quinoa HOM05D001326 ORTHO05D004163 2.4e-14 82.8 125 44.8
MELO3C010830.2 Cucumis melo HOM05D001326 ORTHO05D004163 2.4e-14 82.8 128 44.5
Sabra02G0095900 Salix brachista HOM05D001326 ORTHO05D004163 2.4e-14 82.8 128 43.8
BcaC07g37236 Brassica carinata HOM05D001326 ORTHO05D004163 3.1e-14 82.4 143 40.6
BolC8t47503H Brassica oleracea HOM05D001326 ORTHO05D004163 3.1e-14 82.4 143 40.6
Cpa.g.sc21.138 Carica papaya HOM05D001326 ORTHO05D004163 3.1e-14 82.4 127 40.9
Lalb_Chr23g0267351 Lupinus albus HOM05D001326 ORTHO05D004163 3.1e-14 82.4 152 40.8
PGSC0003DMG400003309 Solanum tuberosum HOM05D001326 ORTHO05D004163 3.1e-14 82.4 149 40.9
C08p06600 Brassica napus HOM05D001326 ORTHO05D004163 4.1e-14 82.0 143 40.6
Ca_15925_v3 Cicer arietinum L. HOM05D001326 ORTHO05D004163 4.1e-14 82.0 160 41.9
COL.COLO4_28576 Corchorus olitorius HOM05D001326 ORTHO05D004163 4.1e-14 82.0 126 42.1
Migut.N02754 Erythranthe guttata HOM05D001326 ORTHO05D004163 4.1e-14 82.0 132 39.4
AT1G47200 Arabidopsis thaliana HOM05D001326 ORTHO05D004163 5.4e-14 81.6 168 39.3
A08p05940 Brassica napus HOM05D001326 ORTHO05D004163 5.4e-14 81.6 127 43.3
BraA08t32595Z Brassica rapa HOM05D001326 ORTHO05D004163 5.4e-14 81.6 127 43.3
Dinv39258 Davidia involucrata HOM05D001326 ORTHO05D004163 5.4e-14 81.6 119 45.4
Migut.O00599 Erythranthe guttata HOM05D001326 ORTHO05D004163 5.4e-14 81.6 142 38.0
MBI16_g04493_MAGBIO Magnolia biondii HOM05D001326 ORTHO05D004163 5.4e-14 81.6 138 42.8
Solyc04g078380.3 Solanum lycopersicum HOM05D001326 ORTHO05D004163 5.4e-14 81.6 149 41.6
SGA_v2.0_scaffold14G06954 Striga asiatica HOM05D001326 ORTHO05D004163 5.4e-14 81.6 171 38.0
CARHR036740 Cardamine hirsuta HOM05D001326 ORTHO05D004163 7.0e-14 81.3 176 37.5
Phvul.001G025400 Phaseolus vulgaris HOM05D001326 ORTHO05D004163 7.0e-14 81.3 113 47.8
Sopen04g031970 Solanum pennellii HOM05D001326 ORTHO05D004163 7.0e-14 81.3 150 41.3
THA.LOC104820501 Tarenaya hassleriana HOM05D001326 ORTHO05D004163 7.0e-14 81.3 161 36.6
BcaB04g17546 Brassica carinata HOM05D001326 ORTHO05D004163 9.2e-14 80.9 147 40.8
Sabra14G0014500 Salix brachista HOM05D001326 ORTHO05D004163 9.2e-14 80.9 130 40.8
AL8G17650 Arabidopsis lyrata HOM05D001326 ORTHO05D004163 1.2e-13 80.5 112 46.4
MD08G1091600 Malus domestica HOM05D001326 ORTHO05D004163 1.2e-13 80.5 143 42.7
PSO541G2388 Papaver somniferum HOM05D001326 ORTHO05D004163 1.2e-13 80.5 151 38.4
SGA_v2.0_scaffold28G11812 Striga asiatica HOM05D001326 ORTHO05D004163 1.2e-13 80.5 152 40.8
Thecc.08G095300 Theobroma cacao HOM05D001326 ORTHO05D004163 1.2e-13 80.5 125 44.8
TWI36G1533 Tripterygium wilfordii HOM05D001326 ORTHO05D004163 1.2e-13 80.5 140 42.1
Nn5g30440 Nelumbo nucifera HOM05D001326 ORTHO05D004163 1.6e-13 80.1 153 37.3
Rhsim06G0057100 Rhododendron simsii HOM05D001326 ORTHO05D004163 1.6e-13 80.1 154 40.9
AL47U10010 Arabidopsis lyrata HOM05D001326 ORTHO05D004163 2.0e-13 79.7 97 46.4
FvH4_2g33670 Fragaria vesca HOM05D001326 ORTHO05D004163 2.0e-13 79.7 125 40.0
FAN15G1104 Fragaria x ananassa HOM05D001326 ORTHO05D004163 2.0e-13 79.7 137 40.9
Medtr3g102500 Medicago truncatula HOM05D001326 ORTHO05D004163 2.0e-13 79.7 142 41.5
Sed0018271 Sechium edule HOM05D001326 ORTHO05D004163 2.0e-13 79.7 124 43.5
Sc15g0005810 Simmondsia chinensis HOM05D001326 ORTHO05D004163 2.0e-13 79.7 150 40.0
VMungo1309G2681 Vigna mungo HOM05D001326 ORTHO05D004163 2.0e-13 79.7 141 40.4
CANSAT25G2642 Cannabis sativa HOM05D001326 ORTHO05D004163 2.7e-13 79.3 144 39.6
Carub.0001s3596 Capsella rubella HOM05D001326 ORTHO05D004163 2.7e-13 79.3 175 36.6
ECA246G0756 Erigeron canadensis HOM05D001326 ORTHO05D004163 2.7e-13 79.3 108 46.3
Nn1g04667 Nelumbo nucifera HOM05D001326 ORTHO05D004163 2.7e-13 79.3 146 38.4
SalBow6G1031 Salvia bowleyana HOM05D001326 ORTHO05D004163 2.7e-13 79.3 159 38.4
MSTRG.22238 Avicennia marina HOM05D001326 ORTHO05D004163 3.5e-13 79.0 161 38.5
FAN27G3472 Fragaria x ananassa HOM05D001326 ORTHO05D004163 3.5e-13 79.0 125 40.0
Glyma.04G043200 Glycine max HOM05D001326 ORTHO05D004163 3.5e-13 79.0 164 39.0
Sp1g34320 Schrenkiella parvula HOM05D001326 ORTHO05D004163 3.5e-13 79.0 127 44.1
Sc15g0005510 Simmondsia chinensis HOM05D001326 ORTHO05D004163 3.5e-13 79.0 150 40.0
unitig_26.g9808 Utricularia gibba HOM05D001326 ORTHO05D004163 4.5e-13 78.6 125 45.6
ATR0205G017 Amborella trichopoda HOM05D001326 ORTHO05D004163 5.9e-13 78.2 136 43.4
Aqoxy5G01135 Aquilegia oxysepala HOM05D001326 ORTHO05D004163 5.9e-13 78.2 129 41.1
Gohir.A05G206500 Gossypium hirsutum HOM05D001326 ORTHO05D004163 5.9e-13 78.2 161 38.5
VMungo0647G1866 Vigna mungo HOM05D001326 ORTHO05D004163 5.9e-13 78.2 113 48.7
Zm00001eb326490 Zea mays HOM05D001326 ORTHO05D004163 5.9e-13 78.2 162 37.7
AUR62044370 Chenopodium quinoa HOM05D001326 ORTHO05D004163 7.8e-13 77.8 141 42.6
CsaV3_2G026380 Cucumis sativus L. HOM05D001326 ORTHO05D004163 7.8e-13 77.8 139 42.4
Actinidia22665 Actinidia chinensis HOM05D001326 ORTHO05D004163 1.0e-12 77.4 178 35.4
Thhalv10011812m.g Eutrema salsugineum HOM05D001326 ORTHO05D004163 1.0e-12 77.4 159 40.9
Gohir.D05G210000 Gossypium hirsutum HOM05D001326 ORTHO05D004163 1.0e-12 77.4 161 38.5
Gorai.009G216400 Gossypium raimondii HOM05D001326 ORTHO05D004163 1.0e-12 77.4 161 38.5
QL02p003371 Quercus lobata HOM05D001326 ORTHO05D004163 1.0e-12 77.4 128 37.5
Sed0026094 Sechium edule HOM05D001326 ORTHO05D004163 1.0e-12 77.4 125 44.8
THA.LOC104814178 Tarenaya hassleriana HOM05D001326 ORTHO05D004163 1.0e-12 77.4 164 38.4
Ah.05g167240 Amaranthus hybridus HOM05D001326 ORTHO05D004163 1.3e-12 77.0 165 41.8
MSTRG.25063 Avicennia marina HOM05D001326 ORTHO05D004163 1.3e-12 77.0 164 36.0
CiPaw.16G035200 Carya illinoinensis HOM05D001326 ORTHO05D004163 1.3e-12 77.0 162 35.8
ClCG08G016240 Citrullus lanatus HOM05D001326 ORTHO05D004163 1.3e-12 77.0 152 41.4
TPR.G25586 Trifolium pratense HOM05D001326 ORTHO05D004163 1.3e-12 77.0 129 42.6
FAN24G1427 Fragaria x ananassa HOM05D001326 ORTHO05D004163 1.7e-12 76.6 157 37.6
Oeu036969.1 Olea europaea HOM05D001326 ORTHO05D004163 1.7e-12 76.6 102 44.1
PSO675G1014 Papaver somniferum HOM05D001326 ORTHO05D004163 1.7e-12 76.6 151 37.1
Zm00001eb007170 Zea mays HOM05D001326 ORTHO05D004163 1.7e-12 76.6 125 40.8
A10p06640 Brassica napus HOM05D001326 ORTHO05D004163 2.3e-12 76.3 132 40.9
BraA10t42922Z Brassica rapa HOM05D001326 ORTHO05D004163 2.3e-12 76.3 132 40.9
Cfa018037 Carpinus fangiana HOM05D001326 ORTHO05D004163 2.3e-12 76.3 130 39.2
Gohir.A01G121500 Gossypium hirsutum HOM05D001326 ORTHO05D004163 2.3e-12 76.3 159 37.7
Gorai.002G133200 Gossypium raimondii HOM05D001326 ORTHO05D004163 2.3e-12 76.3 159 37.7
Gohir.D01G109000 Gossypium hirsutum HOM05D001326 ORTHO05D004163 2.9e-12 75.9 159 37.7
HanXRQChr05g0150481 Helianthus annuus HOM05D001326 ORTHO05D004163 2.9e-12 75.9 141 41.8
AL1G53320 Arabidopsis lyrata HOM05D001326 ORTHO05D004163 3.8e-12 75.5 168 37.5
Zm00001eb400520 Zea mays HOM05D001326 ORTHO05D004163 3.8e-12 75.5 110 41.8
Aa31LG5G18920 Aethionema arabicum HOM05D001326 ORTHO05D004163 5.0e-12 75.1 161 36.0
CiPaw.15G049900 Carya illinoinensis HOM05D001326 ORTHO05D004163 5.0e-12 75.1 132 37.1
Haze_18087 Corylus avellana HOM05D001326 ORTHO05D004163 5.0e-12 75.1 129 37.2
Zm00001eb108360 Zea mays HOM05D001326 ORTHO05D004163 6.6e-12 74.7 97 44.3
EL10As7g23801 Beta vulgaris HOM05D001326 ORTHO05D004163 8.6e-12 74.3 170 37.6
Actinidia33349 Actinidia chinensis HOM05D001326 ORTHO05D004163 1.1e-11 73.9 109 42.2
BcaC08g42930 Brassica carinata HOM05D001326 ORTHO05D004163 1.1e-11 73.9 160 36.9
C06p01670 Brassica napus HOM05D001326 ORTHO05D004163 1.1e-11 73.9 160 36.9
BolC6t35298H Brassica oleracea HOM05D001326 ORTHO05D004163 1.1e-11 73.9 160 36.9
Thhalv10003281m.g Eutrema salsugineum HOM05D001326 ORTHO05D004163 1.5e-11 73.6 102 44.1
AT5G43070 Arabidopsis thaliana HOM05D001326 ORTHO05D004163 1.9e-11 73.2 125 40.8
Ca_13253_v3 Cicer arietinum L. HOM05D001326 ORTHO05D004163 1.9e-11 73.2 146 41.8
Os03g0209000 Oryza sativa ssp. japonica HOM05D001326 ORTHO05D004163 1.9e-11 73.2 103 40.8
Zm00001eb314640 Zea mays HOM05D001326 ORTHO05D004163 2.5e-11 72.8 124 38.7
Duzib041G0056 Durio zibethinus HOM05D001326 ORTHO05D004163 4.3e-11 72.0 138 39.1
Duzib093G0342 Durio zibethinus HOM05D001326 ORTHO05D004163 4.3e-11 72.0 158 37.3
Psat6g014240 Pisum sativum HOM05D001326 ORTHO05D004163 4.3e-11 72.0 104 43.3
CARHR180920 Cardamine hirsuta HOM05D001326 ORTHO05D004163 7.3e-11 71.2 124 38.7
HPP92_007849 Vanilla planifolia HOM05D001326 ORTHO05D004163 7.3e-11 71.2 143 36.4
Zm00001eb339210 Zea mays HOM05D001326 ORTHO05D004163 7.3e-11 71.2 110 41.8
Medtr1g018710 Medicago truncatula HOM05D001326 ORTHO05D004163 1.6e-10 70.1 114 44.7
Gorai.009G276700 Gossypium raimondii HOM05D001326 ORTHO05D004163 4.7e-10 68.6 125 36.0
Gohir.D05G264900 Gossypium hirsutum HOM05D001326 ORTHO05D004163 8.0e-10 67.8 125 36.0
Nitab4.5_0001966g0060 Nicotiana tabacum HOM05D001326 ORTHO05D004163 8.0e-10 67.8 67 53.7
unitig_8.g5036 Utricularia gibba HOM05D001326 ORTHO05D004163 8.0e-10 67.8 113 38.1
HPP92_004637 Vanilla planifolia HOM05D001326 ORTHO05D004163 8.0e-10 67.8 112 39.3
HPP92_023698 Vanilla planifolia HOM05D001326 ORTHO05D004163 1.0e-09 67.4 150 37.3
Zm00001eb215760 Zea mays HOM05D001326 ORTHO05D004163 1.4e-09 67.0 160 35.6
Zm00001eb243250 Zea mays HOM05D001326 ORTHO05D004163 1.4e-09 67.0 160 35.6
Eucgr.F00159 Eucalyptus grandis HOM05D001326 ORTHO05D004163 1.8e-09 66.6 119 36.1
Manes.12G114500 Manihot esculenta HOM05D001326 ORTHO05D004163 2.3e-09 66.2 113 38.1
Os10g0337700 Oryza sativa ssp. japonica HOM05D001326 ORTHO05D004163 2.3e-09 66.2 105 40.0
Aqoxy6G02840 Aquilegia oxysepala HOM05D001326 ORTHO05D004163 3.1e-09 65.9 175 31.4
SHI08357 Sapria himalayana HOM05D001326 ORTHO05D004163 4.0e-09 65.5 132 37.1
SEGI_33127 Sequoiadendron giganteum HOM05D001326 ORTHO05D004163 6.8e-09 64.7 103 37.9
Lj5g0001031 Lotus japonicus HOM05D001326 ORTHO05D004163 1.2e-08 63.9 111 41.4
Carub.0008s0565 Capsella rubella HOM05D001326 ORTHO05D004163 1.5e-08 63.5 110 35.5
Lsat_1_v5_gn_1_23021 Lactuca sativa HOM05D001326 ORTHO05D004163 2.0e-08 63.2 108 39.8
unitig_578.g16543 Utricularia gibba HOM05D001326 ORTHO05D004163 4.4e-08 62.0 126 39.7
vmacro23334 Vaccinium macrocarpon HOM05D001326 ORTHO05D004163 5.8e-08 61.6 37 81.1
Zm00001eb184850 Zea mays HOM05D001326 ORTHO05D002471 3.7e-07 58.9 116 31.9
Os05g0543200 Oryza sativa ssp. japonica HOM05D001326 ORTHO05D002471 6.4e-07 58.2 121 30.6
DCAR_029743 Daucus carota HOM05D000792 ORTHO05D004195 1.1e-06 57.4 62 43.5
Cc01_g19460 Coffea canephora HOM05D001326 ORTHO05D002471 1.4e-06 57.0 92 34.8
Lj4P764T7 Lonicera japonica HOM05D001326 ORTHO05D004163 1.9e-06 56.6 57 47.4
Aqoxy2G03334 Aquilegia oxysepala HOM05D001326 ORTHO05D002471 2.4e-06 56.2 90 34.4
CSS0041343 Camellia sinensis var. sinensis HOM05D001326 ORTHO05D002471 2.4e-06 56.2 93 33.3
Lj1C46G17 Lonicera japonica HOM05D001326 ORTHO05D002471 3.2e-06 55.8 93 33.3
DCAR_002733 Daucus carota HOM05D001326 ORTHO05D002471 7.0e-06 54.7 93 32.3
PSO675G3068 Papaver somniferum HOM05D001326 ORTHO05D002471 7.0e-06 54.7 110 32.7
Sp2g07850 Schrenkiella parvula HOM05D001326 ORTHO05D004163 7.0e-06 54.7 124 33.9
PSO541G6504 Papaver somniferum HOM05D001326 ORTHO05D002471 9.2e-06 54.3 110 32.7


User provided reference genes

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