Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0365 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 6.0e-166 587.4 295 100.0
CDE04G1735 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 1.3e-147 526.6 295 90.2
Nn7g37593 Nelumbo nucifera HOM05D005786 ORTHO05D006946 2.5e-95 352.8 298 62.8
Migut.F01861 Erythranthe guttata HOM05D005786 ORTHO05D006946 9.9e-92 340.9 291 63.2
TAR633G0414 Trochodendron aralioides HOM05D005786 ORTHO05D006946 4.6e-89 332.0 304 60.2
Gohir.D03G060604 Gossypium hirsutum HOM05D005786 ORTHO05D006946 1.3e-88 330.5 293 60.8
Gohir.A02G112711 Gossypium hirsutum HOM05D005786 ORTHO05D006946 5.1e-88 328.6 293 60.4
GSVIVG01019061001 Vitis vinifera HOM05D005786 ORTHO05D006946 5.1e-88 328.6 305 60.7
Duzib235G1473 Durio zibethinus HOM05D005786 ORTHO05D006946 2.5e-87 326.2 293 59.7
Cc09_g03910 Coffea canephora HOM05D005786 ORTHO05D006946 5.6e-87 325.1 294 60.2
Gorai.002G056000 Gossypium raimondii HOM05D005786 ORTHO05D006946 7.3e-87 324.7 296 60.1
Actinidia06794 Actinidia chinensis HOM05D005786 ORTHO05D006946 1.2e-86 323.9 290 59.3
Lj1A579T43 Lonicera japonica HOM05D005786 ORTHO05D006946 1.2e-86 323.9 340 54.4
Ciclev10012322m.g Citrus clementina HOM05D005786 ORTHO05D006946 2.8e-86 322.8 290 60.3
Prupe.6G363100 Prunus persica HOM05D005786 ORTHO05D006946 2.8e-86 322.8 293 60.8
MSTRG.335 Avicennia marina HOM05D005786 ORTHO05D006946 3.6e-86 322.4 279 60.2
Manes.13G003500 Manihot esculenta HOM05D005786 ORTHO05D006946 3.6e-86 322.4 281 61.9
Thecc.05G189200 Theobroma cacao HOM05D005786 ORTHO05D006946 4.7e-86 322.0 293 59.0
Oeu034777.1 Olea europaea HOM05D005786 ORTHO05D006946 8.1e-86 321.2 290 62.4
Lalb_Chr03g0038061 Lupinus albus HOM05D005786 ORTHO05D006946 1.4e-85 320.5 301 58.5
TPR.G33911 Trifolium pratense HOM05D005786 ORTHO05D006946 1.4e-85 320.5 283 60.8
Sopen04g017810 Solanum pennellii HOM05D005786 ORTHO05D006946 1.2e-84 317.4 281 62.3
HPP92_023718 Vanilla planifolia HOM05D005786 ORTHO05D006946 1.5e-84 317.0 283 59.0
CiPaw.07G082100 Carya illinoinensis HOM05D005786 ORTHO05D006946 4.4e-84 315.5 292 58.9
MD04G1246900 Malus domestica HOM05D005786 ORTHO05D006946 4.4e-84 315.5 301 59.5
VMungo1383G2134 Vigna mungo HOM05D005786 ORTHO05D006946 4.4e-84 315.5 293 56.3
RcHm_v2.0_Chr3g0447611 Rosa chinensis HOM05D005786 ORTHO05D006946 5.8e-84 315.1 305 58.0
Ca_08003_v3 Cicer arietinum L. HOM05D005786 ORTHO05D006946 7.6e-84 314.7 297 57.2
MD12G1263300 Malus domestica HOM05D005786 ORTHO05D006946 2.2e-83 313.2 299 58.5
THA.LOC104823809 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 2.9e-83 312.8 267 61.0
CSS0002276 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 3.8e-83 312.4 306 58.2
Phvul.008G052600 Phaseolus vulgaris HOM05D005786 ORTHO05D006946 6.4e-83 311.6 293 57.3
Aqoxy5G04319 Aquilegia oxysepala HOM05D005786 ORTHO05D006946 1.4e-82 310.5 297 58.9
Medtr7g080350 Medicago truncatula HOM05D005786 ORTHO05D006946 1.4e-82 310.5 299 57.5
PGR031G0068 Punica granatum HOM05D005786 ORTHO05D006946 1.9e-82 310.1 280 60.0
CAN.G37.2 Capsicum annuum HOM05D005786 ORTHO05D006946 2.4e-82 309.7 301 59.5
arahy.Tifrunner.gnm1.ann1.K5KE50 Arachis hypogaea HOM05D005786 ORTHO05D006946 3.2e-82 309.3 295 60.0
ECA232G2695 Erigeron canadensis HOM05D005786 ORTHO05D006946 5.4e-82 308.5 289 59.9
DCAR_030004 Daucus carota HOM05D005786 ORTHO05D006946 7.1e-82 308.1 266 62.0
FvH4_6g00240 Fragaria vesca HOM05D005786 ORTHO05D006946 7.1e-82 308.1 296 56.8
MBI07_g02892_MAGBIO Magnolia biondii HOM05D005786 ORTHO05D006946 7.1e-82 308.1 250 65.2
Nitab4.5_0003825g0070 Nicotiana tabacum HOM05D005786 ORTHO05D006946 7.1e-82 308.1 290 59.0
Cfa006249 Carpinus fangiana HOM05D005786 ORTHO05D006946 9.2e-82 307.8 294 57.8
Dinv29083 Davidia involucrata HOM05D005786 ORTHO05D006946 9.2e-82 307.8 302 58.3
arahy.Tifrunner.gnm1.ann1.BC747V Arachis hypogaea HOM05D005786 ORTHO05D006946 1.6e-81 307.0 286 60.5
PSO832G0344 Papaver somniferum HOM05D005786 ORTHO05D006946 3.5e-81 305.8 291 58.1
THA.LOC104805701 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 3.5e-81 305.8 289 58.1
Dinv15702 Davidia involucrata HOM05D005786 ORTHO05D006946 4.6e-81 305.4 301 58.5
Lsat_1_v5_gn_0_14820 Lactuca sativa HOM05D005786 ORTHO05D006946 4.6e-81 305.4 306 58.5
Potri.019G055100 Populus trichocarpa HOM05D005786 ORTHO05D006946 6.0e-81 305.1 295 58.3
CANSAT54G1960 Cannabis sativa HOM05D005786 ORTHO05D006946 7.8e-81 304.7 286 59.4
CsaV3_1G044270 Cucumis sativus L. HOM05D005786 ORTHO05D006946 7.8e-81 304.7 294 57.8
PSO210G0333 Papaver somniferum HOM05D005786 ORTHO05D006946 7.8e-81 304.7 291 58.1
Lj1g0012134 Lotus japonicus HOM05D005786 ORTHO05D006946 1.0e-80 304.3 297 56.6
Carub.0002s1084 Capsella rubella HOM05D005786 ORTHO05D006946 1.3e-80 303.9 292 56.2
AT1G65270 Arabidopsis thaliana HOM05D005786 ORTHO05D006946 1.7e-80 303.5 280 57.1
SalBow6G2392 Salvia bowleyana HOM05D005786 ORTHO05D006946 1.7e-80 303.5 284 57.4
MELO3C010021.2 Cucumis melo HOM05D005786 ORTHO05D006946 3.0e-80 302.8 300 57.0
HanXRQChr04g0101081 Helianthus annuus HOM05D005786 ORTHO05D006946 3.0e-80 302.8 294 58.2
Sc16g0010480 Simmondsia chinensis HOM05D005786 ORTHO05D006946 3.0e-80 302.8 296 56.8
Atru.chr12.1725 Acer truncatum HOM05D005786 ORTHO05D006946 6.6e-80 301.6 259 61.0
AL2G20300 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 8.7e-80 301.2 290 55.9
Aa31LG2G2390 Aethionema arabicum HOM05D005786 ORTHO05D006946 1.1e-79 300.8 280 58.2
Thhalv10004459m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 3.3e-79 299.3 296 56.8
Hund07363 Selenicereus undatus HOM05D005786 ORTHO05D006946 5.6e-79 298.5 310 54.5
BcaB05g24100 Brassica carinata HOM05D005786 ORTHO05D006946 7.3e-79 298.1 281 56.6
Sp7g05900 Schrenkiella parvula HOM05D005786 ORTHO05D006946 7.3e-79 298.1 282 59.6
CARHR056920 Cardamine hirsuta HOM05D005786 ORTHO05D006946 9.6e-79 297.7 289 54.3
Sed0025282 Sechium edule HOM05D005786 ORTHO05D006946 1.6e-78 297.0 295 55.6
Glyma.18G244000 Glycine max HOM05D005786 ORTHO05D006946 3.6e-78 295.8 269 56.5
C04p43640 Brassica napus HOM05D005786 ORTHO05D006946 8.1e-78 294.7 291 59.1
BcaB06g27020 Brassica carinata HOM05D005786 ORTHO05D006946 1.1e-77 294.3 301 56.5
BcaC02g09515 Brassica carinata HOM05D005786 ORTHO05D006946 1.4e-77 293.9 303 57.1
Sp5g19940 Schrenkiella parvula HOM05D005786 ORTHO05D006946 1.4e-77 293.9 292 54.1
BraA04t16680Z Brassica rapa HOM05D005786 ORTHO05D006946 3.1e-77 292.7 300 58.3
TWI18G0853 Tripterygium wilfordii HOM05D005786 ORTHO05D006946 3.1e-77 292.7 273 58.6
Thhalv10018947m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 5.3e-77 292.0 291 54.3
A04p10160 Brassica napus HOM05D005786 ORTHO05D006946 1.2e-76 290.8 305 57.0
Glyma.09G248700 Glycine max HOM05D005786 ORTHO05D006946 3.4e-76 289.3 272 55.9
Sabra19G0064300 Salix brachista HOM05D005786 ORTHO05D006946 2.2e-75 286.6 330 53.0
ATR0743G231 Amborella trichopoda HOM05D005786 ORTHO05D006946 3.8e-75 285.8 290 54.5
BraA02t06369Z Brassica rapa HOM05D005786 ORTHO05D006946 8.4e-75 284.6 282 53.2
A02p13150 Brassica napus HOM05D005786 ORTHO05D006946 2.1e-73 280.0 275 53.5
SGA_v2.0_scaffold340G49308 Striga asiatica HOM05D005786 ORTHO05D006946 1.3e-72 277.3 292 55.1
Peaxi162Scf01053g00210 Petunia axillaris HOM05D005786 ORTHO05D006946 3.0e-72 276.2 301 54.2
FAN05G2398 Fragaria x ananassa HOM05D005786 ORTHO05D006946 3.9e-72 275.8 315 51.7
Lsat_1_v5_gn_2_63981 Lactuca sativa HOM05D005786 ORTHO05D006946 5.1e-72 275.4 297 56.2
EL10Ac4g10004 Beta vulgaris HOM05D005786 ORTHO05D006946 1.5e-71 273.9 296 51.7
C02p21270 Brassica napus HOM05D005786 ORTHO05D006946 5.6e-71 271.9 291 49.8
Nitab4.5_0000248g0060 Nicotiana tabacum HOM05D005786 ORTHO05D006946 5.6e-71 271.9 290 54.8
FAN09G1835 Fragaria x ananassa HOM05D005786 ORTHO05D006946 7.3e-71 271.6 315 50.8
SEGI_32803 Sequoiadendron giganteum HOM05D005786 ORTHO05D006946 7.3e-71 271.6 297 52.5
AUR62006638 Chenopodium quinoa HOM05D005786 ORTHO05D006946 6.2e-70 268.5 309 49.8
Zm00001eb168750 Zea mays HOM05D005786 ORTHO05D006946 3.4e-68 262.7 273 52.7
FAN14G0011 Fragaria x ananassa HOM05D005786 ORTHO05D006946 1.7e-67 260.4 323 48.3
Os11g0264600 Oryza sativa ssp. japonica HOM05D005786 ORTHO05D006946 3.2e-66 256.1 228 57.9
CSS0048270 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.3e-62 244.2 243 56.8
unitig_0.g385 Utricularia gibba HOM05D005786 ORTHO05D006946 4.0e-61 239.2 277 49.1
CARHR216460 Cardamine hirsuta HOM05D005786 ORTHO05D006946 2.5e-55 219.9 197 59.4
Mapoly0069s0067 Marchantia polymorpha HOM05D005786 ORTHO05D006946 1.8e-53 213.8 282 43.6
SMO203G0033 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 2.4e-53 213.4 287 46.7
Actinidia03265 Actinidia chinensis HOM05D005786 ORTHO05D006946 2.0e-52 210.3 178 60.7
Solyc04g047720.4 Solanum lycopersicum HOM05D005786 ORTHO05D006946 5.5e-50 202.2 182 62.1
Psat3g102080 Pisum sativum HOM05D005786 ORTHO05D006946 8.7e-48 194.9 204 56.4
Pp3c3_22280 Physcomitrium patens HOM05D005786 ORTHO05D006946 1.8e-45 187.2 269 40.1
AagrBONN_evm.TU.Sc2ySwM_368.936 Anthoceros agrestis HOM05D005786 ORTHO05D006946 2.1e-41 173.7 287 36.2
Eucgr.H01412 Eucalyptus grandis HOM05D005786 ORTHO05D006946 2.1e-41 173.7 141 60.3
AagrBONN_evm.TU.Sc2ySwM_117.2462 Anthoceros agrestis HOM05D005786 ORTHO05D006946 2.3e-40 170.2 269 36.4
BcaC03g14691 Brassica carinata HOM05D005786 ORTHO05D006946 6.7e-40 168.7 201 47.3
SMO357G0021 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 7.4e-39 165.2 286 40.2
vmacro19569 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 1.7e-38 164.1 183 54.6
QL01p048186 Quercus lobata HOM05D005786 ORTHO05D006946 1.1e-37 161.4 162 55.6
Haze_04584 Corylus avellana HOM05D005786 ORTHO05D006946 9.1e-37 158.3 128 64.8
Cpa.g.sc123.39 Carica papaya HOM05D005786 ORTHO05D006946 2.9e-35 153.3 242 41.7
CSS0025324 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 3.0e-32 143.3 141 58.2
Haze_04585 Corylus avellana HOM05D005786 ORTHO05D006946 1.1e-31 141.4 153 52.9
FAN02G1732 Fragaria x ananassa HOM05D005786 ORTHO05D006946 8.2e-30 135.2 160 50.6
CSS0033529 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 3.5e-28 129.8 143 53.8
vmacro19570 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 3.8e-27 126.3 104 62.5
Cpa.g.sc123.40 Carica papaya HOM05D005786 ORTHO05D006946 1.5e-26 124.4 104 64.4
ClCG03G010290 Citrullus lanatus HOM05D005786 ORTHO05D006946 2.5e-26 123.6 134 55.2
Medtr3g103380 Medicago truncatula HOM05D005786 ORTHO05D006946 4.1e-21 106.3 90 56.7
AL2G20340 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 4.7e-17 92.8 84 58.3
ClCG03G010310 Citrullus lanatus HOM05D005786 ORTHO05D006946 6.1e-17 92.4 119 51.3
CBR_g36458 Chara braunii HOM05D005786 ORTHO05D006946 1.4e-16 91.3 207 35.7
Eucgr.H01411 Eucalyptus grandis HOM05D005786 ORTHO05D006946 8.8e-16 88.6 80 62.5
Oeu040717.1 Olea europaea HOM05D005786 ORTHO05D006946 2.8e-14 83.6 99 50.5
CARHR216470 Cardamine hirsuta HOM05D005786 ORTHO05D006946 4.1e-13 79.7 98 49.0
MCO14G575 Micromonas commoda HOM05D005786 ORTHO05D006946 2.0e-12 77.4 233 28.8
Ah.04g159110 Amaranthus hybridus HOM05D005786 ORTHO05D006946 1.9e-10 70.9 103 44.7
BcaB04g17978 Brassica carinata HOM05D005786 ORTHO05D006946 9.4e-10 68.6 153 36.6
BolC2t08267H Brassica oleracea HOM05D005786 ORTHO05D006946 1.3e-06 58.2 83 42.2


User provided reference genes

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