Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 6.3e-100 367.5 190 100.0
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 6.2e-63 244.6 190 72.6
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 1.5e-45 186.8 142 65.5
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 2.0e-45 186.4 174 56.9
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 2.2e-44 183.0 131 68.7
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 2.2e-44 183.0 171 56.7
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 4.9e-44 181.8 130 68.5
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 1.4e-43 180.3 130 67.7
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 1.4e-43 180.3 130 67.7
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 2.4e-43 179.5 130 70.0
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 2.4e-43 179.5 137 63.5
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 4.2e-43 178.7 125 70.4
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 7.1e-43 177.9 129 66.7
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 9.3e-43 177.6 129 67.4
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 2.7e-42 176.0 124 69.4
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 3.5e-42 175.6 170 55.3
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 6.0e-42 174.9 130 64.6
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 6.0e-42 174.9 123 69.1
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 7.9e-42 174.5 124 70.2
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 1.0e-41 174.1 120 70.0
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 1.3e-41 173.7 142 60.6
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 1.3e-41 173.7 128 66.4
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 1.8e-41 173.3 123 68.3
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 1.8e-41 173.3 120 69.2
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 2.3e-41 172.9 126 69.0
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 3.0e-41 172.6 130 63.8
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 3.0e-41 172.6 154 59.7
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 3.0e-41 172.6 133 68.4
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 3.0e-41 172.6 135 65.9
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 3.0e-41 172.6 124 70.2
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 3.9e-41 172.2 175 56.6
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 3.9e-41 172.2 130 63.8
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 5.1e-41 171.8 150 60.7
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 6.7e-41 171.4 132 62.1
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 6.7e-41 171.4 130 65.4
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 1.1e-40 170.6 119 70.6
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 1.9e-40 169.9 120 68.3
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 2.5e-40 169.5 126 66.7
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 2.5e-40 169.5 117 68.4
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 2.5e-40 169.5 120 66.7
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 2.5e-40 169.5 120 68.3
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 4.3e-40 168.7 121 67.8
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 4.3e-40 168.7 130 63.8
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 5.6e-40 168.3 123 65.9
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 5.6e-40 168.3 130 63.8
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 7.4e-40 167.9 136 63.2
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 7.4e-40 167.9 120 67.5
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 7.4e-40 167.9 123 68.3
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 1.6e-39 166.8 123 65.0
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 2.1e-39 166.4 124 64.5
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 2.1e-39 166.4 123 65.0
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 2.1e-39 166.4 176 50.6
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 3.7e-39 165.6 159 54.7
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 4.8e-39 165.2 147 58.5
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 4.8e-39 165.2 126 61.9
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 6.2e-39 164.9 123 65.0
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 1.1e-38 164.1 123 65.0
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 1.1e-38 164.1 117 68.4
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 1.1e-38 164.1 120 66.7
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 1.1e-38 164.1 123 65.9
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 1.4e-38 163.7 126 66.7
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 2.4e-38 162.9 117 67.5
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 2.4e-38 162.9 119 66.4
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 2.4e-38 162.9 120 65.0
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 2.4e-38 162.9 124 65.3
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 3.1e-38 162.5 119 68.9
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 3.1e-38 162.5 124 66.9
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 4.0e-38 162.2 117 66.7
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 4.0e-38 162.2 117 66.7
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 4.0e-38 162.2 117 66.7
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 4.0e-38 162.2 117 66.7
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 4.0e-38 162.2 117 66.7
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 4.0e-38 162.2 117 66.7
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 4.0e-38 162.2 120 64.2
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 6.9e-38 161.4 117 66.7
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 6.9e-38 161.4 124 65.3
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 6.9e-38 161.4 118 65.3
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 9.0e-38 161.0 119 68.1
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 9.0e-38 161.0 127 63.8
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 9.0e-38 161.0 121 65.3
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 1.2e-37 160.6 117 65.0
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 1.2e-37 160.6 124 65.3
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 2.0e-37 159.8 118 67.8
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 2.0e-37 159.8 117 65.8
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 2.6e-37 159.5 124 62.9
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 3.4e-37 159.1 126 62.7
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 3.4e-37 159.1 104 71.2
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 5.8e-37 158.3 124 64.5
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 5.8e-37 158.3 124 64.5
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 5.8e-37 158.3 120 66.7
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 7.6e-37 157.9 124 63.7
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.3e-36 157.1 124 64.5
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 2.2e-36 156.4 124 62.1
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 4.9e-36 155.2 130 61.5
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 1.9e-35 153.3 158 52.5
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 5.5e-35 151.8 101 71.3
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 4.6e-34 148.7 154 50.6
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 7.9e-34 147.9 118 61.0
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 1.8e-33 146.7 162 51.2
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 4.8e-31 138.7 96 70.8
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 2.3e-25 119.8 92 65.2
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 2.3e-25 119.8 92 65.2
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 2.3e-25 119.8 92 65.2
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 3.0e-25 119.4 83 67.5
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 4.3e-24 115.5 181 38.1
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 3.4e-21 105.9 133 42.9
Gorai.009G326100 Gossypium raimondii HOM05D006961 ORTHO05D008809 4.5e-21 105.5 93 63.4
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 8.5e-20 101.3 125 44.0
Actinidia31945 Actinidia chinensis HOM05D006961 ORTHO05D008809 3.2e-19 99.4 100 55.0
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 3.6e-18 95.9 122 42.6
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 2.8e-15 86.3 100 41.0
SalBow2G3119 Salvia bowleyana HOM05D006961 ORTHO05D008809 5.9e-13 78.6 71 57.7
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.9e-11 73.6 47 70.2
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 6.3e-07 58.5 107 37.4


User provided reference genes

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