Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0311 Ceratophyllum demersum HOM05D005395 ORTHO05D006352 1.3e-90 336.3 156 100.0
MBI03_g07304_MAGBIO Magnolia biondii HOM05D005395 ORTHO05D006352 1.1e-17 94.0 69 62.3
Aqoxy1G02896 Aquilegia oxysepala HOM05D005395 ORTHO05D006352 2.3e-15 86.3 67 59.7
Nn7g36191 Nelumbo nucifera HOM05D005395 ORTHO05D006352 5.7e-14 81.6 69 58.0
Atru.chr11.731 Acer truncatum HOM05D005395 ORTHO05D006352 4.8e-13 78.6 71 52.1
PSO339G2846 Papaver somniferum HOM05D005395 ORTHO05D006352 4.8e-13 78.6 68 54.4
TAR633G2667 Trochodendron aralioides HOM05D005395 ORTHO05D006352 4.8e-13 78.6 69 56.5
HPP92_011342 Vanilla planifolia HOM05D005395 ORTHO05D006352 1.4e-12 77.0 68 52.9
GSVIVG01032086001 Vitis vinifera HOM05D005395 ORTHO05D006352 1.4e-12 77.0 69 53.6
Hund24995 Selenicereus undatus HOM05D005395 ORTHO05D006352 1.8e-12 76.6 68 51.5
HPP92_011265 Vanilla planifolia HOM05D005395 ORTHO05D006352 1.8e-12 76.6 68 52.9
Cpa.g.sc245.16 Carica papaya HOM05D005395 ORTHO05D006352 9.1e-12 74.3 69 50.7
DCAR_005449 Daucus carota HOM05D005395 ORTHO05D006352 1.2e-11 73.9 72 47.2
MD07G1010300 Malus domestica HOM05D005395 ORTHO05D006352 1.2e-11 73.9 70 51.4
Ciclev10030541m.g Citrus clementina HOM05D005395 ORTHO05D006352 1.6e-11 73.6 71 49.3
FAN06G4072 Fragaria x ananassa HOM05D005395 ORTHO05D006352 1.6e-11 73.6 70 50.0
FAN10G2468 Fragaria x ananassa HOM05D005395 ORTHO05D006352 1.6e-11 73.6 70 50.0
FvH4_7g01000 Fragaria vesca HOM05D005395 ORTHO05D006352 2.0e-11 73.2 70 50.0
AUR62041247 Chenopodium quinoa HOM05D005395 ORTHO05D006352 2.6e-11 72.8 67 52.2
SGA_v2.0_scaffold119G32730 Striga asiatica HOM05D005395 ORTHO05D006352 2.6e-11 72.8 68 48.5
TWI09G1525 Tripterygium wilfordii HOM05D005395 ORTHO05D006352 2.6e-11 72.8 69 53.6
Actinidia24666 Actinidia chinensis HOM05D005395 ORTHO05D006352 3.5e-11 72.4 69 50.7
COL.COLO4_04642 Corchorus olitorius HOM05D005395 ORTHO05D006352 3.5e-11 72.4 69 55.1
Oeu063172.1 Olea europaea HOM05D005395 ORTHO05D006352 3.5e-11 72.4 69 49.3
Rhsim07G0055200 Rhododendron simsii HOM05D005395 ORTHO05D006352 3.5e-11 72.4 69 49.3
FAN03G2830 Fragaria x ananassa HOM05D005395 ORTHO05D006352 5.9e-11 71.6 70 48.6
Lj7C570T8 Lonicera japonica HOM05D005395 ORTHO05D006352 7.7e-11 71.2 69 50.7
PGR042G3169 Punica granatum HOM05D005395 ORTHO05D006352 7.7e-11 71.2 70 51.4
vmacro13663 Vaccinium macrocarpon HOM05D005395 ORTHO05D006352 7.7e-11 71.2 69 47.8
Prupe.2G012600 Prunus persica HOM05D005395 ORTHO05D006352 1.0e-10 70.9 70 50.0
RcHm_v2.0_Chr1g0315901 Rosa chinensis HOM05D005395 ORTHO05D006352 1.0e-10 70.9 69 50.7
TPR.G30923 Trifolium pratense HOM05D005395 ORTHO05D006352 1.0e-10 70.9 70 47.1
Potri.003G022600 Populus trichocarpa HOM05D005395 ORTHO05D006352 1.3e-10 70.5 69 49.3
Ca_14376_v3 Cicer arietinum L. HOM05D005395 ORTHO05D006352 2.2e-10 69.7 70 47.1
Gohir.D04G018600 Gossypium hirsutum HOM05D005395 ORTHO05D006352 2.2e-10 69.7 66 53.0
Gorai.012G022200 Gossypium raimondii HOM05D005395 ORTHO05D006352 2.2e-10 69.7 66 53.0
QL11p003492 Quercus lobata HOM05D005395 ORTHO05D006352 2.2e-10 69.7 70 51.4
Sabra03G0014300 Salix brachista HOM05D005395 ORTHO05D006352 2.9e-10 69.3 69 50.7
SHI19148 Sapria himalayana HOM05D005395 ORTHO05D006352 6.5e-10 68.2 68 48.5
Cfa008089 Carpinus fangiana HOM05D005395 ORTHO05D006352 1.1e-09 67.4 69 49.3
Glyma.08G155900 Glycine max HOM05D005395 ORTHO05D006352 1.1e-09 67.4 69 43.5
Gohir.A05G396700 Gossypium hirsutum HOM05D005395 ORTHO05D006352 1.1e-09 67.4 66 51.5
Sed0006979 Sechium edule HOM05D005395 ORTHO05D006352 1.5e-09 67.0 69 47.8
Migut.B01303 Erythranthe guttata HOM05D005395 ORTHO05D006352 1.9e-09 66.6 69 47.8
Peaxi162Scf00428g00318 Petunia axillaris HOM05D005395 ORTHO05D006352 1.9e-09 66.6 68 42.6
Psat5g193800 Pisum sativum HOM05D005395 ORTHO05D006352 1.9e-09 66.6 70 44.3
Glyma.15G274000 Glycine max HOM05D005395 ORTHO05D006352 2.5e-09 66.2 69 42.0
HanXRQChr12g0379891 Helianthus annuus HOM05D005395 ORTHO05D006352 2.5e-09 66.2 67 47.8
Migut.B01025 Erythranthe guttata HOM05D005395 ORTHO05D006352 3.2e-09 65.9 69 47.8
Lj3g0013961 Lotus japonicus HOM05D005395 ORTHO05D006352 3.2e-09 65.9 69 43.5
QL05p060653 Quercus lobata HOM05D005395 ORTHO05D006352 3.2e-09 65.9 72 45.8
ClCG10G012430 Citrullus lanatus HOM05D005395 ORTHO05D006352 4.2e-09 65.5 69 47.8
VMungo1080G1687 Vigna mungo HOM05D005395 ORTHO05D006352 4.2e-09 65.5 70 44.3
EL10Ac1g02254 Beta vulgaris HOM05D005395 ORTHO05D006352 7.2e-09 64.7 67 46.3
unitig_0.g1385 Utricularia gibba HOM05D005395 ORTHO05D006352 9.4e-09 64.3 69 42.0
MELO3C023972.2 Cucumis melo HOM05D005395 ORTHO05D006352 1.2e-08 63.9 69 44.9
Nitab4.5_0000634g0140 Nicotiana tabacum HOM05D005395 ORTHO05D006352 1.2e-08 63.9 69 44.9
Nitab4.5_0013258g0010 Nicotiana tabacum HOM05D005395 ORTHO05D006352 1.2e-08 63.9 69 43.5
Lsat_1_v5_gn_4_31580 Lactuca sativa HOM05D005395 ORTHO05D006352 1.6e-08 63.5 68 44.1
Phvul.005G021500 Phaseolus vulgaris HOM05D005395 ORTHO05D006352 1.6e-08 63.5 70 41.4
CANSAT78G1614 Cannabis sativa HOM05D005395 ORTHO05D006352 2.1e-08 63.2 69 46.4
CiPaw.13G004500 Carya illinoinensis HOM05D005395 ORTHO05D006352 2.1e-08 63.2 69 46.4
CAN.G1820.1 Capsicum annuum HOM05D005395 ORTHO05D006352 3.6e-08 62.4 69 39.1
Lalb_Chr13g0291151 Lupinus albus HOM05D005395 ORTHO05D006352 3.6e-08 62.4 70 42.9
A10p22380 Brassica napus HOM05D005395 ORTHO05D006352 4.7e-08 62.0 68 48.5
Aa31sc160G20 Aethionema arabicum HOM05D005395 ORTHO05D006352 6.1e-08 61.6 69 44.9
AT5G16850 Arabidopsis thaliana HOM05D005395 ORTHO05D006352 8.0e-08 61.2 68 44.1
BraA10t44297Z Brassica rapa HOM05D005395 ORTHO05D006352 8.0e-08 61.2 68 48.5
Sp6g27270 Schrenkiella parvula HOM05D005395 ORTHO05D006352 8.0e-08 61.2 69 46.4
arahy.Tifrunner.gnm1.ann1.LX21RY Arachis hypogaea HOM05D005395 ORTHO05D006352 1.0e-07 60.8 70 41.4
C09p60230 Brassica napus HOM05D005395 ORTHO05D006352 1.0e-07 60.8 68 47.1
BolC9t58856H Brassica oleracea HOM05D005395 ORTHO05D006352 1.0e-07 60.8 68 47.1
arahy.Tifrunner.gnm1.ann1.XBA78H Arachis hypogaea HOM05D005395 ORTHO05D006352 1.4e-07 60.5 70 41.4
CSS0040942 Camellia sinensis var. sinensis HOM05D005395 ORTHO05D006352 1.4e-07 60.5 68 44.1
BcaC04g18841 Brassica carinata HOM05D005395 ORTHO05D006352 1.8e-07 60.1 68 45.6
Carub.0006s1507 Capsella rubella HOM05D005395 ORTHO05D006352 1.2e-06 57.4 69 42.0
Thhalv10012498m.g Eutrema salsugineum HOM05D005395 ORTHO05D006352 4.4e-06 55.5 68 42.6
CARHR196310 Cardamine hirsuta HOM05D005395 ORTHO05D006352 7.5e-06 54.7 69 37.7
ClCG04G006730 Citrullus lanatus HOM05D010822 ORTHO05D012064 7.5e-06 54.7 51 52.9


User provided reference genes

Program Settings