Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0288 Ceratophyllum demersum HOM05D000642 ORTHO05D000483 1.2e-98 363.2 188 100.0
CDE04G3700 Ceratophyllum demersum HOM05D000642 ORTHO05D000483 7.9e-87 323.9 185 90.3
CDE07G0039 Ceratophyllum demersum HOM05D000642 ORTHO05D000483 3.0e-54 215.7 112 97.3
Nn2g13589 Nelumbo nucifera HOM05D000642 ORTHO05D000483 8.9e-38 161.0 190 52.1
Nn2g11348 Nelumbo nucifera HOM05D000642 ORTHO05D000483 4.9e-36 155.2 185 48.6
TAR623G0160 Trochodendron aralioides HOM05D000642 ORTHO05D000483 8.6e-33 144.4 192 48.4
TAR369G0174 Trochodendron aralioides HOM05D000642 ORTHO05D000483 1.1e-32 144.1 198 47.5
Nn2g13592 Nelumbo nucifera HOM05D000642 ORTHO05D000483 2.1e-23 113.2 190 40.5
AT5G58960 Arabidopsis thaliana HOM05D000642 ORTHO05D000483 6.9e-22 108.2 202 42.1
Cpa.g.sc112.79 Carica papaya HOM05D000642 ORTHO05D000483 3.4e-21 105.9 176 40.9
A10p16220 Brassica napus HOM05D000642 ORTHO05D000483 4.4e-21 105.5 194 40.7
CARHR285190 Cardamine hirsuta HOM05D000642 ORTHO05D000483 9.9e-21 104.4 206 39.3
ClCG02G019770 Citrullus lanatus HOM05D000642 ORTHO05D000483 2.9e-20 102.8 199 41.2
BraA10t43703Z Brassica rapa HOM05D000642 ORTHO05D000483 4.9e-20 102.1 196 39.8
Dinv14476 Davidia involucrata HOM05D000642 ORTHO05D000483 3.2e-19 99.4 177 39.5
Thhalv10013123m.g Eutrema salsugineum HOM05D000642 ORTHO05D000483 4.2e-19 99.0 206 37.4
Manes.01G165400 Manihot esculenta HOM05D000642 ORTHO05D000483 9.3e-19 97.8 189 41.3
Thecc.09G307500 Theobroma cacao HOM05D000642 ORTHO05D000483 1.2e-18 97.4 207 39.1
BcaB08g36303 Brassica carinata HOM05D000642 ORTHO05D000483 1.6e-18 97.1 193 39.4
BcaB08g36302 Brassica carinata HOM05D000642 ORTHO05D000483 2.7e-18 96.3 185 40.0
BolC9t57978H Brassica oleracea HOM05D000642 ORTHO05D000483 2.7e-18 96.3 185 40.0
MELO3C025877.2 Cucumis melo HOM05D000642 ORTHO05D000483 2.7e-18 96.3 202 38.1
MBI05_g34818_MAGBIO Magnolia biondii HOM05D000642 ORTHO05D000483 2.7e-18 96.3 151 41.1
C09p51160 Brassica napus HOM05D000642 ORTHO05D000483 3.5e-18 95.9 197 38.1
AL8G35340 Arabidopsis lyrata HOM05D000642 ORTHO05D000483 7.8e-18 94.7 188 39.4
Manes.02G122542 Manihot esculenta HOM05D000642 ORTHO05D000483 7.8e-18 94.7 124 47.6
COL.COLO4_19085 Corchorus olitorius HOM05D000642 ORTHO05D000483 1.3e-17 94.0 185 40.5
Ciclev10028137m.g Citrus clementina HOM05D000642 ORTHO05D000483 1.7e-17 93.6 189 35.4
Duzib168G1912 Durio zibethinus HOM05D000642 ORTHO05D000483 3.0e-17 92.8 195 37.4
Gohir.A05G090800 Gossypium hirsutum HOM05D000642 ORTHO05D000483 3.0e-17 92.8 202 38.1
Sp6g20660 Schrenkiella parvula HOM05D000642 ORTHO05D000483 3.0e-17 92.8 200 38.0
Atru.chr3.4055 Acer truncatum HOM05D000642 ORTHO05D000483 3.9e-17 92.4 190 35.8
CsaV3_6G016480 Cucumis sativus L. HOM05D000642 ORTHO05D000483 5.1e-17 92.0 205 38.5
Sabra01G0164600 Salix brachista HOM05D002694 ORTHO05D002927 1.9e-16 90.1 136 46.3
Gorai.009G094300 Gossypium raimondii HOM05D000642 ORTHO05D000483 2.5e-16 89.7 210 35.7
Potri.009G041000 Populus trichocarpa HOM05D000642 ORTHO05D000483 4.3e-16 89.0 198 38.4
Cc01_g13720 Coffea canephora HOM05D000642 ORTHO05D000483 1.6e-15 87.0 119 42.0
Aa31LG1G11670 Aethionema arabicum HOM05D000642 ORTHO05D000483 3.6e-15 85.9 201 37.3
Solyc02g083110.1 Solanum lycopersicum HOM05D000642 ORTHO05D000483 4.8e-15 85.5 113 46.0
TWI79G0016 Tripterygium wilfordii HOM05D000642 ORTHO05D000483 6.2e-15 85.1 176 37.5
Sabra09G0028800 Salix brachista HOM05D000642 ORTHO05D000483 1.1e-14 84.3 186 39.2
Sed0025912 Sechium edule HOM05D000642 ORTHO05D000483 1.8e-14 83.6 180 36.7
Nitab4.5_0001607g0010 Nicotiana tabacum HOM05D000642 ORTHO05D000483 6.9e-14 81.6 115 46.1
CSS0021421 Camellia sinensis var. sinensis HOM05D000642 ORTHO05D000483 1.2e-13 80.9 118 43.2
CSS0046249 Camellia sinensis var. sinensis HOM05D000642 ORTHO05D000483 1.2e-13 80.9 118 43.2
Sopen02g027870 Solanum pennellii HOM05D000642 ORTHO05D000483 1.2e-13 80.9 113 43.4
Lj2A1074T38 Lonicera japonica HOM05D000642 ORTHO05D000483 2.0e-13 80.1 111 47.7
Carub.0008s1960 Capsella rubella HOM05D000642 ORTHO05D000483 7.6e-13 78.2 120 44.2
Peaxi162Scf00369g00015 Petunia axillaris HOM05D000642 ORTHO05D000483 7.6e-13 78.2 118 44.1
Sed0021470 Sechium edule HOM05D000642 ORTHO05D000483 2.2e-12 76.6 109 43.1
Glyma.14G009400 Glycine max HOM05D000642 ORTHO05D000483 2.9e-12 76.3 116 44.0
ATR0618G350 Amborella trichopoda HOM05D000642 ORTHO05D000483 3.8e-12 75.9 198 35.9
PGSC0003DMG400001576 Solanum tuberosum HOM05D000642 ORTHO05D000483 4.9e-12 75.5 116 43.1
Actinidia25128 Actinidia chinensis HOM05D000642 ORTHO05D000483 6.4e-12 75.1 175 34.9
ECA248G3773 Erigeron canadensis HOM05D000642 ORTHO05D000483 6.4e-12 75.1 118 40.7
MSTRG.12662 Avicennia marina HOM05D000642 ORTHO05D000483 8.4e-12 74.7 184 34.2
MBI14_g32937_MAGBIO Magnolia biondii HOM05D000642 ORTHO05D000483 1.1e-11 74.3 112 42.9
SalBow2G1826 Salvia bowleyana HOM05D000642 ORTHO05D000483 1.1e-11 74.3 184 33.7
Aqoxy1G00730 Aquilegia oxysepala HOM05D000642 ORTHO05D000483 2.4e-11 73.2 110 41.8
Hma1.2p1_0274F.1_g110240 Hydrangea macrophylla HOM05D000642 ORTHO05D000483 2.4e-11 73.2 114 44.7
CAN.G890.45 Capsicum annuum HOM05D000642 ORTHO05D000483 3.2e-11 72.8 118 41.5
CDE02G1809 Ceratophyllum demersum HOM05D000642 ORTHO05D008166 3.2e-11 72.8 133 36.8
Nitab4.5_0004381g0020 Nicotiana tabacum HOM05D000642 ORTHO05D000483 3.2e-11 72.8 120 41.7
PSO339G2572 Papaver somniferum HOM05D000642 ORTHO05D000483 3.2e-11 72.8 114 43.0
TWI31G0730 Tripterygium wilfordii HOM05D000642 ORTHO05D000483 3.2e-11 72.8 125 40.8
HanXRQChr01g0011021 Helianthus annuus HOM05D000642 ORTHO05D000483 4.2e-11 72.4 109 38.5
Cfa011632 Carpinus fangiana HOM05D000642 ORTHO05D000483 7.1e-11 71.6 118 38.1
Migut.N00896 Erythranthe guttata HOM05D000642 ORTHO05D000483 7.1e-11 71.6 172 36.6
ECA236G0717 Erigeron canadensis HOM05D000642 ORTHO05D000483 9.3e-11 71.2 120 37.5
Lsat_1_v5_gn_5_171020 Lactuca sativa HOM05D000642 ORTHO05D000483 1.6e-10 70.5 119 39.5
Duzib170G0858 Durio zibethinus HOM05D000642 ORTHO05D000483 2.7e-10 69.7 113 42.5
Rhsim13G0074300 Rhododendron simsii HOM05D000642 ORTHO05D000483 2.7e-10 69.7 123 39.0
Lsat_1_v5_gn_8_72140 Lactuca sativa HOM05D000642 ORTHO05D000483 3.5e-10 69.3 191 34.0
Hund18867 Selenicereus undatus HOM05D000642 ORTHO05D000483 3.5e-10 69.3 138 34.8
QL93p2004_0027 Quercus lobata HOM05D000642 ORTHO05D000483 7.9e-10 68.2 135 34.8
DCAR_018940 Daucus carota HOM05D000642 ORTHO05D000483 1.3e-09 67.4 120 40.8
Haze_24237 Corylus avellana HOM05D000642 ORTHO05D000483 1.8e-09 67.0 121 38.8
Lalb_Chr20g0115101 Lupinus albus HOM05D000642 ORTHO05D000483 3.0e-09 66.2 119 37.0
MD03G1078100 Malus domestica HOM05D000642 ORTHO05D000483 3.9e-09 65.9 116 42.2
RcHm_v2.0_Chr5g0068071 Rosa chinensis HOM05D000642 ORTHO05D000483 6.7e-09 65.1 117 39.3
Medtr3g462150 Medicago truncatula HOM05D000642 ORTHO05D000483 8.7e-09 64.7 129 40.3
THA.LOC104799408 Tarenaya hassleriana HOM05D000642 ORTHO05D000483 8.7e-09 64.7 189 30.7
VMungo0540G1862 Vigna mungo HOM05D000642 ORTHO05D000483 8.7e-09 64.7 114 40.4
Gohir.D05G091800 Gossypium hirsutum HOM05D000642 ORTHO05D000483 1.1e-08 64.3 132 37.9
Lj6g0000613 Lotus japonicus HOM05D000642 ORTHO05D000483 1.1e-08 64.3 133 36.1
Phvul.006G063700 Phaseolus vulgaris HOM05D000642 ORTHO05D000483 1.1e-08 64.3 114 39.5
Glyma.18G067600 Glycine max HOM05D000642 ORTHO05D000483 1.5e-08 63.9 117 36.8
MBI14_g41425_MAGBIO Magnolia biondii HOM05D000642 ORTHO05D000483 1.9e-08 63.5 57 50.9
PSO384G2305 Papaver somniferum HOM05D000642 ORTHO05D000483 1.9e-08 63.5 110 35.5
CiPaw.13G083400 Carya illinoinensis HOM05D000642 ORTHO05D000483 2.5e-08 63.2 122 36.9
Glyma.02G304400 Glycine max HOM05D000642 ORTHO05D000483 2.5e-08 63.2 111 41.4
PGR119G0859 Punica granatum HOM05D000642 ORTHO05D000483 2.5e-08 63.2 131 35.1
Eucgr.B02281 Eucalyptus grandis HOM05D000642 ORTHO05D000483 3.3e-08 62.8 124 35.5
FAN16G1468 Fragaria x ananassa HOM05D000642 ORTHO05D000483 3.3e-08 62.8 113 38.1
Psat5g162600 Pisum sativum HOM05D000642 ORTHO05D000483 3.3e-08 62.8 119 38.7
QL01p027406 Quercus lobata HOM05D000642 ORTHO05D000483 3.3e-08 62.8 116 37.1
Glyma.08G334700 Glycine max HOM05D000642 ORTHO05D000483 5.6e-08 62.0 112 39.3
vmacro03002 Vaccinium macrocarpon HOM05D000642 ORTHO05D000483 5.6e-08 62.0 185 33.0
PGR102G1863 Punica granatum HOM05D000642 ORTHO05D000483 9.6e-08 61.2 171 31.6
TPR.G30116 Trifolium pratense HOM05D000642 ORTHO05D000483 9.6e-08 61.2 130 37.7
HanXRQChr05g0135541 Helianthus annuus HOM05D000642 ORTHO05D000483 1.6e-07 60.5 179 33.5
Actinidia08564 Actinidia chinensis HOM05D000642 ORTHO05D000483 6.2e-07 58.5 118 35.6
Ca_14890_v3 Cicer arietinum L. HOM05D000642 ORTHO05D000483 8.1e-07 58.2 118 36.4
FvH4_3g37850 Fragaria vesca HOM05D000642 ORTHO05D000483 1.1e-06 57.8 117 37.6
FAN11G0989 Fragaria x ananassa HOM05D000642 ORTHO05D000483 1.1e-06 57.8 117 37.6
Sc21g0006150 Simmondsia chinensis HOM05D000642 ORTHO05D000483 1.4e-06 57.4 149 34.2
Ah.14g082660 Amaranthus hybridus HOM05D000642 ORTHO05D000483 2.4e-06 56.6 145 33.8
AUR62001705 Chenopodium quinoa HOM05D000642 ORTHO05D000483 5.3e-06 55.5 157 30.6
Prupe.6G063100 Prunus persica HOM05D000642 ORTHO05D000483 5.3e-06 55.5 128 34.4


User provided reference genes

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