Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0268 Ceratophyllum demersum HOM05D003842 ORTHO05D004436 7.6e-115 417.2 208 100.0
Nn6g35197 Nelumbo nucifera HOM05D003842 ORTHO05D004436 2.3e-50 203.0 205 53.7
TAR633G0529 Trochodendron aralioides HOM05D003842 ORTHO05D004436 5.0e-50 201.8 206 54.9
ClCG04G009540 Citrullus lanatus HOM05D003842 ORTHO05D004436 5.8e-46 188.3 206 50.5
FAN05G0072 Fragaria x ananassa HOM05D003842 ORTHO05D004436 5.8e-46 188.3 209 52.2
FAN05G4099 Fragaria x ananassa HOM05D003842 ORTHO05D004436 5.8e-46 188.3 209 52.2
FAN02G1267 Fragaria x ananassa HOM05D003842 ORTHO05D004436 1.7e-45 186.8 209 52.2
FvH4_6g17010 Fragaria vesca HOM05D003842 ORTHO05D004436 1.1e-44 184.1 208 51.4
RcHm_v2.0_Chr3g0471001 Rosa chinensis HOM05D003842 ORTHO05D004436 1.1e-44 184.1 209 50.7
FAN09G2316 Fragaria x ananassa HOM05D003842 ORTHO05D004436 1.9e-44 183.3 208 51.4
CiPaw.09G003300 Carya illinoinensis HOM05D003842 ORTHO05D004436 9.2e-44 181.0 210 48.6
MD12G1104900 Malus domestica HOM05D003842 ORTHO05D004436 1.2e-43 180.6 208 51.0
QL07p041738 Quercus lobata HOM05D003842 ORTHO05D004436 1.2e-43 180.6 208 49.5
Manes.08G013802 Manihot esculenta HOM05D003842 ORTHO05D004436 3.5e-43 179.1 206 48.1
Oeu045240.1 Olea europaea HOM05D003842 ORTHO05D004436 4.6e-43 178.7 206 48.5
Eucgr.K02431 Eucalyptus grandis HOM05D003842 ORTHO05D004436 7.8e-43 177.9 212 47.6
Sed0026042 Sechium edule HOM05D003842 ORTHO05D004436 7.8e-43 177.9 206 49.5
Potri.006G120800 Populus trichocarpa HOM05D003842 ORTHO05D004436 1.0e-42 177.6 207 47.8
Haze_19462 Corylus avellana HOM05D003842 ORTHO05D004436 1.3e-42 177.2 208 48.6
Cfa016461 Carpinus fangiana HOM05D003842 ORTHO05D004436 1.7e-42 176.8 208 48.1
MELO3C024492.2 Cucumis melo HOM05D003842 ORTHO05D004436 1.7e-42 176.8 206 48.5
CsaV3_6G040160 Cucumis sativus L. HOM05D003842 ORTHO05D004436 1.7e-42 176.8 206 49.0
PSO063G4107 Papaver somniferum HOM05D003842 ORTHO05D004436 1.7e-42 176.8 207 47.8
PSO339G3623 Papaver somniferum HOM05D003842 ORTHO05D004436 1.7e-42 176.8 207 47.8
CSS0023266 Camellia sinensis var. sinensis HOM05D003842 ORTHO05D004436 5.1e-42 175.3 206 50.0
PGR142G1271 Punica granatum HOM05D003842 ORTHO05D004436 5.1e-42 175.3 208 47.6
Sopen09g003320 Solanum pennellii HOM05D003842 ORTHO05D004436 1.5e-41 173.7 208 47.6
CANSAT80G2389 Cannabis sativa HOM05D003842 ORTHO05D004436 1.9e-41 173.3 206 49.0
Solyc09g008490.4 Solanum lycopersicum HOM05D003842 ORTHO05D004436 2.5e-41 172.9 208 47.6
Atru.chr8.1720 Acer truncatum HOM05D003842 ORTHO05D004436 4.3e-41 172.2 209 47.4
Lsat_1_v5_gn_6_28640 Lactuca sativa HOM05D003842 ORTHO05D004436 4.3e-41 172.2 206 48.1
Ciclev10023867m.g Citrus clementina HOM05D003842 ORTHO05D004436 5.6e-41 171.8 210 47.1
arahy.Tifrunner.gnm1.ann1.BQYP5G Arachis hypogaea HOM05D003842 ORTHO05D004436 9.5e-41 171.0 209 46.9
arahy.Tifrunner.gnm1.ann1.CVPH5H Arachis hypogaea HOM05D003842 ORTHO05D004436 1.2e-40 170.6 209 46.9
Nitab4.5_0003314g0020 Nicotiana tabacum HOM05D003842 ORTHO05D004436 1.2e-40 170.6 210 46.7
CAN.G1038.13 Capsicum annuum HOM05D003842 ORTHO05D004436 1.6e-40 170.2 208 47.1
TWI74G0820 Tripterygium wilfordii HOM05D003842 ORTHO05D004436 1.6e-40 170.2 213 45.5
ATR0043G024 Amborella trichopoda HOM05D003842 ORTHO05D004436 2.1e-40 169.9 201 48.3
Glyma.19G186900 Glycine max HOM05D003842 ORTHO05D004436 2.8e-40 169.5 213 46.0
Medtr7g102430 Medicago truncatula HOM05D003842 ORTHO05D004436 4.7e-40 168.7 209 46.4
Nitab4.5_0002535g0020 Nicotiana tabacum HOM05D003842 ORTHO05D004436 4.7e-40 168.7 210 46.2
Sc20g0005740 Simmondsia chinensis HOM05D003842 ORTHO05D004436 4.7e-40 168.7 208 49.5
Ca_08873_v3 Cicer arietinum L. HOM05D003842 ORTHO05D004436 6.2e-40 168.3 209 45.9
Gohir.A11G323300 Gossypium hirsutum HOM05D003842 ORTHO05D004436 1.1e-39 167.5 210 46.7
Rhsim03G0088500 Rhododendron simsii HOM05D003842 ORTHO05D004436 1.1e-39 167.5 208 46.6
TPR.G8693 Trifolium pratense HOM05D003842 ORTHO05D004436 1.4e-39 167.2 209 45.9
Aa31LG5G22020 Aethionema arabicum HOM05D003842 ORTHO05D004436 1.8e-39 166.8 215 44.7
Thhalv10016131m.g Eutrema salsugineum HOM05D003842 ORTHO05D004436 1.8e-39 166.8 213 44.6
Gohir.A09G144400 Gossypium hirsutum HOM05D003842 ORTHO05D004436 1.8e-39 166.8 212 46.2
GSVIVG01033696001 Vitis vinifera HOM05D003842 ORTHO05D004436 2.3e-39 166.4 207 47.8
Aqoxy1G01066 Aquilegia oxysepala HOM05D003842 ORTHO05D004436 3.1e-39 166.0 202 49.0
Gohir.D11G342400 Gossypium hirsutum HOM05D003842 ORTHO05D004436 3.1e-39 166.0 210 46.7
Gorai.006G160800 Gossypium raimondii HOM05D003842 ORTHO05D004436 3.1e-39 166.0 212 46.2
Gorai.007G372400 Gossypium raimondii HOM05D003842 ORTHO05D004436 3.1e-39 166.0 210 46.7
CARHR131190 Cardamine hirsuta HOM05D003842 ORTHO05D004436 4.0e-39 165.6 213 44.1
Gohir.D09G140200 Gossypium hirsutum HOM05D003842 ORTHO05D004436 4.0e-39 165.6 212 46.2
HanXRQChr13g0400661 Helianthus annuus HOM05D003842 ORTHO05D004436 4.0e-39 165.6 216 45.8
Phvul.001G181800 Phaseolus vulgaris HOM05D003842 ORTHO05D004436 4.0e-39 165.6 205 46.8
Sp4g19070 Schrenkiella parvula HOM05D003842 ORTHO05D004436 4.0e-39 165.6 215 44.7
CSS0021824 Camellia sinensis var. sinensis HOM05D003842 ORTHO05D004436 5.2e-39 165.2 206 49.0
Ca_29803_v3 Cicer arietinum L. HOM05D003842 ORTHO05D004436 8.9e-39 164.5 207 45.4
Cpa.g.sc5.147 Carica papaya HOM05D003842 ORTHO05D004436 1.2e-38 164.1 210 46.7
C04p65510 Brassica napus HOM05D003842 ORTHO05D004436 1.5e-38 163.7 213 44.6
BraA04t18297Z Brassica rapa HOM05D003842 ORTHO05D004436 1.5e-38 163.7 213 44.6
A04p28120 Brassica napus HOM05D003842 ORTHO05D004436 2.0e-38 163.3 213 44.6
Peaxi162Scf00435g01013 Petunia axillaris HOM05D003842 ORTHO05D004436 2.0e-38 163.3 206 45.1
AL4G33000 Arabidopsis lyrata HOM05D003842 ORTHO05D004436 3.4e-38 162.5 215 44.2
BolC4t28040H Brassica oleracea HOM05D003842 ORTHO05D004436 4.4e-38 162.2 215 44.2
Thecc.05G072900 Theobroma cacao HOM05D003842 ORTHO05D004436 4.4e-38 162.2 212 47.2
AT2G36810 Arabidopsis thaliana HOM05D003842 ORTHO05D004436 5.8e-38 161.8 214 44.9
Carub.0004s1865 Capsella rubella HOM05D003842 ORTHO05D004436 7.5e-38 161.4 215 44.2
ECA233G4297 Erigeron canadensis HOM05D003842 ORTHO05D004436 7.5e-38 161.4 207 45.9
Lalb_Chr20g0112381 Lupinus albus HOM05D003842 ORTHO05D004436 9.9e-38 161.0 209 47.4
THA.LOC104818591 Tarenaya hassleriana HOM05D003842 ORTHO05D004436 6.4e-37 158.3 213 44.6
Migut.L01724 Erythranthe guttata HOM05D003842 ORTHO05D004436 8.3e-37 157.9 205 47.8
Duzib106G1778 Durio zibethinus HOM05D003842 ORTHO05D004436 1.1e-36 157.5 207 45.9
Zm00001eb003810 Zea mays HOM05D003842 ORTHO05D004436 2.4e-36 156.4 217 44.7
Ah.08g211380 Amaranthus hybridus HOM05D003842 ORTHO05D004436 5.4e-36 155.2 206 44.2
Duzib093G0118 Durio zibethinus HOM05D003842 ORTHO05D004436 5.4e-36 155.2 212 45.8
BcaC02g07579 Brassica carinata HOM05D003842 ORTHO05D004436 7.1e-36 154.8 217 43.8
EL10Ac7g16718 Beta vulgaris HOM05D003842 ORTHO05D004436 6.0e-35 151.8 208 43.3
SGA_v2.0_scaffold224G42922 Striga asiatica HOM05D003842 ORTHO05D004436 6.0e-35 151.8 214 43.0
MSTRG.26674 Avicennia marina HOM05D003842 ORTHO05D004436 3.3e-33 146.0 207 44.4
Sabra06G0095000 Salix brachista HOM05D003842 ORTHO05D004436 1.8e-31 140.2 276 36.2
Cc06_g04620 Coffea canephora HOM05D003842 ORTHO05D004436 1.5e-30 137.1 207 42.5
Lj3C992G6 Lonicera japonica HOM05D003842 ORTHO05D004436 7.6e-30 134.8 159 48.4
FAN14G4492 Fragaria x ananassa HOM05D003842 ORTHO05D004436 6.4e-29 131.7 109 60.6
AUR62042272 Chenopodium quinoa HOM05D003842 ORTHO05D004436 5.4e-28 128.6 178 44.9
Actinidia26645 Actinidia chinensis HOM05D003842 ORTHO05D004436 1.2e-27 127.5 110 58.2
Ca_29497_v3 Cicer arietinum L. HOM05D003842 ORTHO05D004436 1.0e-26 124.4 111 54.1
Mapoly0008s0039 Marchantia polymorpha HOM05D003842 ORTHO05D004436 1.9e-25 120.2 196 41.3
SEGI_23674 Sequoiadendron giganteum HOM05D003842 ORTHO05D004436 1.9e-25 120.2 183 42.6
AUR62036532 Chenopodium quinoa HOM05D003842 ORTHO05D004436 2.5e-25 119.8 167 46.7
Pp3c2_21970 Physcomitrium patens HOM05D003842 ORTHO05D004436 1.1e-23 114.4 193 38.3
SEGI_39450 Sequoiadendron giganteum HOM05D003842 ORTHO05D004436 1.1e-23 114.4 145 46.2
DCAR_020802 Daucus carota HOM05D003842 ORTHO05D004436 9.9e-22 107.8 205 34.6
SMO207G0008 Selaginella moellendorffii HOM05D003842 ORTHO05D004436 9.3e-20 101.3 199 38.7
Pp3c22_4780 Physcomitrium patens HOM05D003842 ORTHO05D004436 3.0e-18 96.3 192 33.9
Prupe.7G124700 Prunus persica HOM05D003842 ORTHO05D004436 1.1e-17 94.4 128 44.5
Dinv35821 Davidia involucrata HOM05D003842 ORTHO05D004436 1.9e-17 93.6 141 43.3
Ca_31348_v3 Cicer arietinum L. HOM05D003842 ORTHO05D004436 3.6e-16 89.4 79 57.0
Psat0s1048g0160 Pisum sativum HOM05D003842 ORTHO05D004436 1.5e-14 84.0 129 41.1
Glyma.03G186800 Glycine max HOM05D003842 ORTHO05D004436 2.4e-12 76.6 67 62.7
CBR_g37399 Chara braunii HOM05D003842 ORTHO05D004436 1.6e-11 73.9 96 37.5
Lj1g0002569 Lotus japonicus HOM05D003842 ORTHO05D004436 1.1e-07 61.2 69 47.8
Ca_08928_v3 Cicer arietinum L. HOM05D003842 ORTHO05D004436 1.8e-07 60.5 65 49.2
CBR_g53950 Chara braunii HOM05D003842 ORTHO05D004436 2.6e-06 56.6 65 47.7


User provided reference genes

Program Settings