Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0245 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 9.4e-150 533.5 267 100.0
CDE04G2175 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 1.2e-99 367.1 220 84.5
MELO3C010785.2 Cucumis melo HOM05D007224 ORTHO05D009169 9.6e-54 214.5 214 57.5
CsaV3_2G025920 Cucumis sativus L. HOM05D007224 ORTHO05D009169 3.7e-53 212.6 214 56.1
ClCG08G016710 Citrullus lanatus HOM05D007224 ORTHO05D009169 6.3e-53 211.8 184 58.7
TWI12G0175 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 4.1e-52 209.1 224 50.4
TWI56G1112 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 6.9e-52 208.4 226 50.0
PSO541G3785 Papaver somniferum HOM05D007224 ORTHO05D009169 1.5e-51 207.2 217 53.0
TAR628G0831 Trochodendron aralioides HOM05D007224 ORTHO05D009169 1.0e-50 204.5 214 54.2
Duzib116G0584 Durio zibethinus HOM05D007224 ORTHO05D009169 1.7e-50 203.8 175 57.1
Ciclev10002194m.g Citrus clementina HOM05D007224 ORTHO05D009169 6.5e-50 201.8 198 54.5
GSVIVG01009296001 Vitis vinifera HOM05D007224 ORTHO05D009169 1.1e-49 201.1 209 52.6
THA.LOC104799830 Tarenaya hassleriana HOM05D007224 ORTHO05D009169 4.2e-49 199.1 198 53.0
Atru.chr13.874 Acer truncatum HOM05D007224 ORTHO05D009169 9.3e-49 198.0 233 47.6
RcHm_v2.0_Chr6g0310081 Rosa chinensis HOM05D007224 ORTHO05D009169 1.6e-48 197.2 233 48.5
CiPaw.07G171700 Carya illinoinensis HOM05D007224 ORTHO05D009169 2.1e-48 196.8 205 52.7
Nn5g30669 Nelumbo nucifera HOM05D007224 ORTHO05D009169 4.6e-48 195.7 197 51.8
PSO675G4824 Papaver somniferum HOM05D007224 ORTHO05D009169 1.0e-47 194.5 220 50.5
Thhalv10011734m.g Eutrema salsugineum HOM05D007224 ORTHO05D009169 1.8e-47 193.7 208 51.4
MD15G1064800 Malus domestica HOM05D007224 ORTHO05D009169 3.0e-47 193.0 225 48.4
FAN20G0095 Fragaria x ananassa HOM05D007224 ORTHO05D009169 3.9e-47 192.6 231 48.1
Ca_06981_v3 Cicer arietinum L. HOM05D007224 ORTHO05D009169 5.1e-47 192.2 193 48.2
Medtr1g017450 Medicago truncatula HOM05D007224 ORTHO05D009169 5.1e-47 192.2 180 57.2
Gohir.A06G026200 Gossypium hirsutum HOM05D007224 ORTHO05D009169 6.7e-47 191.8 176 55.7
Gorai.010G028000 Gossypium raimondii HOM05D007224 ORTHO05D009169 1.5e-46 190.7 179 55.3
A10p07160 Brassica napus HOM05D007224 ORTHO05D009169 1.9e-46 190.3 165 56.4
FAN27G0962 Fragaria x ananassa HOM05D007224 ORTHO05D009169 1.9e-46 190.3 230 47.4
Gohir.D06G023300 Gossypium hirsutum HOM05D007224 ORTHO05D009169 1.9e-46 190.3 181 54.7
Sc26g0004240 Simmondsia chinensis HOM05D007224 ORTHO05D009169 2.5e-46 189.9 203 52.2
Lj5g0004917 Lotus japonicus HOM05D007224 ORTHO05D009169 3.3e-46 189.5 199 52.8
MD08G1077300 Malus domestica HOM05D007224 ORTHO05D009169 7.4e-46 188.3 223 50.2
AL1G52590 Arabidopsis lyrata HOM05D007224 ORTHO05D009169 9.7e-46 188.0 212 50.5
BcaC08g42889 Brassica carinata HOM05D007224 ORTHO05D009169 9.7e-46 188.0 208 49.0
C06p01100 Brassica napus HOM05D007224 ORTHO05D009169 9.7e-46 188.0 208 49.0
AT1G44920 Arabidopsis thaliana HOM05D007224 ORTHO05D009169 1.6e-45 187.2 209 50.2
CANSAT56G0920 Cannabis sativa HOM05D007224 ORTHO05D009169 1.6e-45 187.2 230 47.4
Psat6g017040 Pisum sativum HOM05D007224 ORTHO05D009169 1.6e-45 187.2 200 50.5
TPR.G13169 Trifolium pratense HOM05D007224 ORTHO05D009169 2.2e-45 186.8 194 49.0
Sp1g33790 Schrenkiella parvula HOM05D007224 ORTHO05D009169 3.7e-45 186.0 180 51.1
CARHR036150 Cardamine hirsuta HOM05D007224 ORTHO05D009169 1.8e-44 183.7 148 60.1
CSS0049759 Camellia sinensis var. sinensis HOM05D007224 ORTHO05D009169 2.4e-44 183.3 160 60.0
Aa31LG7G10090 Aethionema arabicum HOM05D007224 ORTHO05D009169 4.1e-44 182.6 243 44.9
Carub.0001s3542 Capsella rubella HOM05D007224 ORTHO05D009169 5.3e-44 182.2 183 51.9
DCAR_009866 Daucus carota HOM05D007224 ORTHO05D009169 9.0e-44 181.4 193 51.3
BraA10t42965Z Brassica rapa HOM05D007224 ORTHO05D009169 1.2e-43 181.0 236 44.5
CAN.G1239.16 Capsicum annuum HOM05D007224 ORTHO05D009169 2.0e-43 180.3 237 44.7
Glyma.17G232300 Glycine max HOM05D007224 ORTHO05D009169 5.9e-43 178.7 195 49.2
Phvul.001G031100 Phaseolus vulgaris HOM05D007224 ORTHO05D009169 5.9e-43 178.7 196 49.0
Sopen04g031100 Solanum pennellii HOM05D007224 ORTHO05D009169 7.7e-43 178.3 246 45.1
Actinidia10224 Actinidia chinensis HOM05D007224 ORTHO05D009169 1.7e-42 177.2 197 49.2
Solyc04g077500.4 Solanum lycopersicum HOM05D007224 ORTHO05D009169 1.7e-42 177.2 246 45.1
Rhsim06G0064800 Rhododendron simsii HOM05D007224 ORTHO05D009169 2.2e-42 176.8 202 48.5
Hund05274 Selenicereus undatus HOM05D007224 ORTHO05D009169 2.2e-42 176.8 198 48.5
FvH4_2g32650 Fragaria vesca HOM05D007224 ORTHO05D009169 2.9e-42 176.4 228 45.2
FAN15G3290 Fragaria x ananassa HOM05D007224 ORTHO05D009169 2.9e-42 176.4 132 62.9
Nitab4.5_0001494g0030 Nicotiana tabacum HOM05D007224 ORTHO05D009169 2.9e-42 176.4 247 45.3
vmacro21415 Vaccinium macrocarpon HOM05D007224 ORTHO05D009169 3.8e-42 176.0 218 48.6
Actinidia19293 Actinidia chinensis HOM05D007224 ORTHO05D009169 6.5e-42 175.3 179 50.3
Potri.002G114900 Populus trichocarpa HOM05D007224 ORTHO05D009169 6.5e-42 175.3 214 49.1
unitig_52.g17426 Utricularia gibba HOM05D007224 ORTHO05D009169 6.5e-42 175.3 155 54.2
FAN24G0100 Fragaria x ananassa HOM05D007224 ORTHO05D009169 8.5e-42 174.9 228 45.2
BolC6t35243H Brassica oleracea HOM05D007224 ORTHO05D009169 1.9e-41 173.7 226 44.7
HanXRQChr04g0110471 Helianthus annuus HOM05D007224 ORTHO05D009169 1.9e-41 173.7 205 46.8
PGSC0003DMG400004920 Solanum tuberosum HOM05D007224 ORTHO05D009169 2.5e-41 173.3 157 55.4
HPP92_007712 Vanilla planifolia HOM05D007224 ORTHO05D009169 2.5e-41 173.3 214 47.2
VMungo0647G2475 Vigna mungo HOM05D007224 ORTHO05D009169 3.2e-41 172.9 195 47.7
MSTRG.22207 Avicennia marina HOM05D007224 ORTHO05D009169 4.2e-41 172.6 205 45.4
Ah.11g039150 Amaranthus hybridus HOM05D007224 ORTHO05D009169 7.2e-41 171.8 223 45.7
MBI16_g06074_MAGBIO Magnolia biondii HOM05D007224 ORTHO05D009169 7.2e-41 171.8 211 48.3
Sed0020426 Sechium edule HOM05D007224 ORTHO05D009169 1.2e-40 171.0 163 54.6
Manes.18G049850 Manihot esculenta HOM05D007224 ORTHO05D009169 1.6e-40 170.6 222 47.3
Thecc.08G084200 Theobroma cacao HOM05D007224 ORTHO05D009169 2.1e-40 170.2 217 46.1
COL.COLO4_28456 Corchorus olitorius HOM05D007224 ORTHO05D009169 2.7e-40 169.9 183 47.0
Haze_22381 Corylus avellana HOM05D007224 ORTHO05D009169 2.7e-40 169.9 224 43.3
Lsat_1_v5_gn_0_47281 Lactuca sativa HOM05D007224 ORTHO05D009169 2.7e-40 169.9 183 50.8
Sabra02G0090900 Salix brachista HOM05D007224 ORTHO05D009169 7.9e-40 168.3 195 50.8
Zm00001eb056020 Zea mays HOM05D007224 ORTHO05D009169 7.9e-40 168.3 210 46.7
BcaB07g33899 Brassica carinata HOM05D007224 ORTHO05D009169 1.4e-39 167.5 165 50.3
Cfa013733 Carpinus fangiana HOM05D007224 ORTHO05D009169 1.8e-39 167.2 205 45.9
PGR083G2708 Punica granatum HOM05D007224 ORTHO05D009169 2.3e-39 166.8 209 45.0
Lalb_Chr22g0355811 Lupinus albus HOM05D007224 ORTHO05D009169 3.0e-39 166.4 215 45.6
ATR0739G089 Amborella trichopoda HOM05D007224 ORTHO05D009169 6.7e-39 165.2 153 54.9
Lj4A752T19 Lonicera japonica HOM05D007224 ORTHO05D009169 8.8e-39 164.9 218 45.0
SalBow7G4028 Salvia bowleyana HOM05D007224 ORTHO05D009169 3.3e-38 162.9 226 42.0
Os03g0729100 Oryza sativa ssp. japonica HOM05D007224 ORTHO05D009169 2.8e-37 159.8 150 52.0
Prupe.1G418700 Prunus persica HOM05D007224 ORTHO05D009169 2.4e-36 156.8 219 43.4
Aqoxy6G02448 Aquilegia oxysepala HOM05D007224 ORTHO05D009169 3.1e-36 156.4 202 44.6
arahy.Tifrunner.gnm1.ann1.TQ0B6U Arachis hypogaea HOM05D007224 ORTHO05D009169 2.6e-35 153.3 162 48.8
EL10Ac1g02348 Beta vulgaris HOM05D007224 ORTHO05D009169 4.5e-35 152.5 206 42.7
SGA_v2.0_scaffold238G43907 Striga asiatica HOM05D007224 ORTHO05D009169 4.5e-35 152.5 215 42.8
Migut.C00453 Erythranthe guttata HOM05D007224 ORTHO05D009169 7.7e-35 151.8 205 42.9
Dinv44928 Davidia involucrata HOM05D007224 ORTHO05D009169 2.9e-34 149.8 164 51.8
arahy.Tifrunner.gnm1.ann1.XZQ8AB Arachis hypogaea HOM05D007224 ORTHO05D009169 3.2e-33 146.4 136 52.2
Haze_22389 Corylus avellana HOM05D007224 ORTHO05D009169 3.2e-33 146.4 186 44.6
Cc10_g07670 Coffea canephora HOM05D007224 ORTHO05D009169 9.4e-33 144.8 216 41.2
Nitab4.5_0010252g0010 Nicotiana tabacum HOM05D007224 ORTHO05D009169 2.7e-32 143.3 157 49.0
Peaxi162Scf01161g00120 Petunia axillaris HOM05D007224 ORTHO05D009169 3.6e-32 142.9 233 41.2
Mapoly0039s0075 Marchantia polymorpha HOM05D007224 ORTHO05D009169 5.1e-31 139.0 137 46.7
Pp3c6_15140 Physcomitrium patens HOM05D007224 ORTHO05D009169 2.8e-29 133.3 134 46.3
AUR62024535 Chenopodium quinoa HOM05D007224 ORTHO05D009169 7.7e-27 125.2 83 67.5
ECA232G4225 Erigeron canadensis HOM05D007224 ORTHO05D009169 1.7e-26 124.0 85 65.9
SMO147G0155 Selaginella moellendorffii HOM05D007224 ORTHO05D009169 5.0e-26 122.5 168 36.9
AUR62033890 Chenopodium quinoa HOM05D007224 ORTHO05D009169 4.2e-25 119.4 78 70.5
CBR_g45556 Chara braunii HOM05D000019 ORTHO05D000002 7.5e-22 108.6 127 42.5
Zm00001eb035950 Zea mays HOM05D007224 ORTHO05D009169 7.5e-22 108.6 76 65.8
Cpa.g.sc2059.2 Carica papaya HOM05D007224 ORTHO05D009169 4.8e-21 105.9 155 43.2
Cre13.g569250 Chlamydomonas reinhardtii HOM05D007224 ORTHO05D009169 1.2e-16 91.3 132 40.9
Zm00001eb141580 Zea mays HOM05D007224 ORTHO05D445531 4.0e-15 86.3 122 41.0
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 1.1e-09 68.2 53 64.2


User provided reference genes

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