Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0223 Ceratophyllum demersum HOM05D006421 ORTHO05D008268 5.3e-158 561.6 439 100.0
CDE06G1662 Ceratophyllum demersum HOM05D006421 ORTHO05D008268 2.0e-27 127.9 70 97.1
Hund04507 Selenicereus undatus HOM05D006421 ORTHO05D008268 1.0e-15 89.0 178 34.3
arahy.Tifrunner.gnm1.ann1.658XMK Arachis hypogaea HOM05D006421 ORTHO05D008268 2.9e-15 87.4 146 36.3
Lj8P705T28 Lonicera japonica HOM05D006421 ORTHO05D008268 2.9e-15 87.4 204 31.4
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 1.1e-14 85.5 152 36.2
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea HOM05D006421 ORTHO05D008268 3.2e-14 84.0 144 36.8
Manes.16G122900 Manihot esculenta HOM05D006421 ORTHO05D008268 1.2e-13 82.0 111 43.2
Oeu053117.1 Olea europaea HOM05D006421 ORTHO05D008268 2.7e-13 80.9 134 36.6
Psat6g029040 Pisum sativum HOM05D006421 ORTHO05D008268 6.1e-13 79.7 182 37.9
Eucgr.C01728 Eucalyptus grandis HOM05D006421 ORTHO05D008268 8.0e-13 79.3 144 33.3
FAN20G2434 Fragaria x ananassa HOM05D006421 ORTHO05D008268 8.0e-13 79.3 194 30.4
Gohir.A07G028900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 2.3e-12 77.8 112 39.3
AT4G32190 Arabidopsis thaliana HOM05D006421 ORTHO05D008268 5.2e-12 76.6 177 29.4
Thhalv10024464m.g Eutrema salsugineum HOM05D006421 ORTHO05D008268 6.7e-12 76.3 177 31.6
CiPaw.07G224100 Carya illinoinensis HOM05D006421 ORTHO05D008268 8.8e-12 75.9 116 38.8
FAN24G1512 Fragaria x ananassa HOM05D006421 ORTHO05D008268 8.8e-12 75.9 103 38.8
BcaC09g52004 Brassica carinata HOM05D006421 ORTHO05D008268 1.1e-11 75.5 117 36.8
SalBow4G3177 Salvia bowleyana HOM05D006421 ORTHO05D008268 1.1e-11 75.5 111 40.5
DCAR_001538 Daucus carota HOM05D006421 ORTHO05D008268 1.5e-11 75.1 214 27.6
FAN15G0163 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.5e-11 75.1 117 35.9
TWI34G1016 Tripterygium wilfordii HOM05D006421 ORTHO05D008268 1.5e-11 75.1 144 34.7
Medtr1g012620 Medicago truncatula HOM05D006421 ORTHO05D008268 2.6e-11 74.3 139 36.0
RcHm_v2.0_Chr6g0297771 Rosa chinensis HOM05D006421 ORTHO05D008268 2.6e-11 74.3 112 37.5
Carub.0007s0836 Capsella rubella HOM05D006421 ORTHO05D008268 5.7e-11 73.2 251 41.0
CDE06G2618 Ceratophyllum demersum HOM05D006421 ORTHO05D008268 5.7e-11 73.2 62 71.0
SGA_v2.0_scaffold20G09108 Striga asiatica HOM05D002695 ORTHO05D002964 5.7e-11 73.2 164 34.1
C01p06780 Brassica napus HOM05D006421 ORTHO05D008268 7.5e-11 72.8 134 35.1
BolC1t00672H Brassica oleracea HOM05D006421 ORTHO05D008268 7.5e-11 72.8 134 35.1
FvH4_2g28941 Fragaria vesca HOM05D006421 ORTHO05D008268 4.8e-10 70.1 101 37.6
Oeu033132.1 Olea europaea HOM05D006421 ORTHO05D008268 4.8e-10 70.1 107 39.3
Gorai.001G034500 Gossypium raimondii HOM05D006421 ORTHO05D008268 8.2e-10 69.3 138 32.6
C02p24100 Brassica napus HOM05D006421 ORTHO05D008268 1.1e-09 68.9 165 52.7
FAN27G1287 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.1e-09 68.9 162 30.9
ECA246G1400 Erigeron canadensis HOM05D002695 ORTHO05D002964 1.4e-09 68.6 116 33.6
BcaNung03144 Brassica carinata HOM05D006421 ORTHO05D008268 3.1e-09 67.4 134 31.3
TPR.G15679 Trifolium pratense HOM05D006421 ORTHO05D008268 5.3e-09 66.6 79 45.6
AL7G19640 Arabidopsis lyrata HOM05D006421 ORTHO05D008268 7.0e-09 66.2 177 27.1
A01p06150 Brassica napus HOM05D006421 ORTHO05D008268 9.1e-09 65.9 166 38.0
BraA10t43273Z Brassica rapa HOM05D006421 ORTHO05D008268 1.6e-08 65.1 177 28.2
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla HOM05D006421 ORTHO05D008268 2.7e-08 64.3 140 31.4
Cfa013134 Carpinus fangiana HOM05D006421 ORTHO05D008268 5.9e-08 63.2 129 31.8
HanXRQChr16g0510771 Helianthus annuus HOM05D006421 ORTHO05D008268 7.7e-08 62.8 156 32.1
Gohir.D07G032900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 1.0e-07 62.4 112 34.8
Potri.006G255800 Populus trichocarpa HOM05D006421 ORTHO05D008268 1.7e-07 61.6 141 31.9
Zm00001eb206500 Zea mays HOM05D006421 ORTHO05D008268 1.7e-07 61.6 100 38.0
Actinidia15670 Actinidia chinensis HOM05D006421 ORTHO05D008268 3.8e-07 60.5 242 25.2
Migut.A00033 Erythranthe guttata HOM05D006421 ORTHO05D008268 3.8e-07 60.5 218 26.6
vmacro05173 Vaccinium macrocarpon HOM05D006421 ORTHO05D008268 6.5e-07 59.7 120 35.8
Os02g0186400 Oryza sativa ssp. japonica HOM05D006421 ORTHO05D008268 8.5e-07 59.3 95 40.0
Cpa.g.sc217.10 Carica papaya HOM05D006421 ORTHO05D008268 2.5e-06 57.8 85 37.6
PSO170G2190 Papaver somniferum HOM05D006421 ORTHO05D008268 9.4e-06 55.8 177 25.4


User provided reference genes

Program Settings