Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0212 Ceratophyllum demersum HOM05D005077 ORTHO05D006889 0.0e+00 1239.9 612 100.0
Aqoxy5G00195 Aquilegia oxysepala HOM05D005077 ORTHO05D006889 9.5e-214 747.3 747 53.5
MBI10_g13801_MAGBIO Magnolia biondii HOM05D005077 ORTHO05D006889 9.8e-211 737.3 722 53.9
Duzib177G0384 Durio zibethinus HOM05D005077 ORTHO05D006889 1.7e-210 736.5 742 53.4
TAR362G0145 Trochodendron aralioides HOM05D005077 ORTHO05D006889 1.7e-210 736.5 745 54.5
GSVIVG01023486001 Vitis vinifera HOM05D005077 ORTHO05D006889 2.7e-208 729.2 745 53.0
Cfa006359 Carpinus fangiana HOM05D005077 ORTHO05D006889 2.3e-207 726.1 745 52.3
MD04G1230700 Malus domestica HOM05D005077 ORTHO05D006889 1.1e-206 723.8 739 52.6
Manes.08G139800 Manihot esculenta HOM05D005077 ORTHO05D006889 1.1e-206 723.8 739 52.2
Potri.013G047400 Populus trichocarpa HOM05D005077 ORTHO05D006889 1.9e-206 723.0 742 52.0
PSO832G3809 Papaver somniferum HOM05D005077 ORTHO05D006889 3.3e-206 722.2 744 52.8
CiPaw.07G073200 Carya illinoinensis HOM05D005077 ORTHO05D006889 5.6e-206 721.5 743 51.1
THA.LOC104827285 Tarenaya hassleriana HOM05D005077 ORTHO05D006889 7.3e-206 721.1 736 53.1
Potri.019G019600 Populus trichocarpa HOM05D005077 ORTHO05D006889 1.6e-205 719.9 746 52.8
Psat3g087440 Pisum sativum HOM05D005077 ORTHO05D006889 3.6e-205 718.8 739 51.7
Prupe.6G350500 Prunus persica HOM05D005077 ORTHO05D006889 8.0e-205 717.6 743 51.5
TPR.G4698 Trifolium pratense HOM05D005077 ORTHO05D006889 8.0e-205 717.6 738 51.5
Thecc.05G270400 Theobroma cacao HOM05D005077 ORTHO05D006889 1.4e-204 716.8 746 52.5
Lj1g0022218 Lotus japonicus HOM05D005077 ORTHO05D006889 3.1e-204 715.7 744 51.9
Gohir.D11G257100 Gossypium hirsutum HOM05D005077 ORTHO05D006889 5.2e-204 714.9 745 52.1
PSO210G4243 Papaver somniferum HOM05D005077 ORTHO05D006889 5.2e-204 714.9 744 52.2
Gorai.007G275500 Gossypium raimondii HOM05D005077 ORTHO05D006889 6.8e-204 714.5 745 51.9
VMungo1383G1518 Vigna mungo HOM05D005077 ORTHO05D006889 5.8e-203 711.4 741 51.1
Medtr7g111650 Medicago truncatula HOM05D005077 ORTHO05D006889 7.5e-203 711.1 738 50.8
Glyma.19G115700 Glycine max HOM05D005077 ORTHO05D006889 1.1e-201 707.2 743 51.8
Actinidia39994 Actinidia chinensis HOM05D005077 ORTHO05D006889 1.9e-201 706.4 745 52.3
ATR0736G030 Amborella trichopoda HOM05D005077 ORTHO05D006889 2.4e-201 706.1 731 50.9
CANSAT54G1999 Cannabis sativa HOM05D005077 ORTHO05D006889 2.4e-201 706.1 746 50.8
FvH4_6g01810 Fragaria vesca HOM05D005077 ORTHO05D006889 3.5e-200 702.2 736 50.7
Ca_08303_v3 Cicer arietinum L. HOM05D005077 ORTHO05D006889 7.8e-200 701.0 776 49.9
Phvul.001G114900 Phaseolus vulgaris HOM05D005077 ORTHO05D006889 7.8e-200 701.0 747 50.6
TWI36G1092 Tripterygium wilfordii HOM05D005077 ORTHO05D006889 1.0e-199 700.7 745 52.8
Oeu006006.2 Olea europaea HOM05D005077 ORTHO05D006889 3.3e-198 695.7 747 50.3
Migut.F00798 Erythranthe guttata HOM05D005077 ORTHO05D006889 5.2e-196 688.3 748 50.5
PGR142G0621 Punica granatum HOM05D005077 ORTHO05D006889 6.8e-196 688.0 739 50.9
CARHR078630 Cardamine hirsuta HOM05D005077 ORTHO05D006889 4.4e-195 685.3 725 51.4
COL.COLO4_15493 Corchorus olitorius HOM05D005077 ORTHO05D006889 4.4e-195 685.3 762 49.7
RcHm_v2.0_Chr3g0449521 Rosa chinensis HOM05D005077 ORTHO05D006889 5.8e-195 684.9 737 49.9
SalBow3G3009 Salvia bowleyana HOM05D005077 ORTHO05D006889 1.3e-194 683.7 746 50.4
HanXRQChr14g0454211 Helianthus annuus HOM05D005077 ORTHO05D006889 1.7e-194 683.3 745 50.5
MELO3C008703.2 Cucumis melo HOM05D005077 ORTHO05D006889 4.9e-194 681.8 740 50.3
Sed0014730 Sechium edule HOM05D005077 ORTHO05D006889 3.2e-193 679.1 744 50.3
Nn1g02888 Nelumbo nucifera HOM05D005077 ORTHO05D006889 4.1e-193 678.7 680 54.1
Nitab4.5_0006737g0070 Nicotiana tabacum HOM05D005077 ORTHO05D006889 9.2e-193 677.6 749 48.7
MSTRG.27374 Avicennia marina HOM05D005077 ORTHO05D006889 1.2e-192 677.2 747 50.3
BolC5t34930H Brassica oleracea HOM05D005077 ORTHO05D006889 1.6e-192 676.8 722 50.8
C05p62770 Brassica napus HOM05D005077 ORTHO05D006889 2.1e-192 676.4 722 50.8
Eucgr.B02151 Eucalyptus grandis HOM05D005077 ORTHO05D006889 2.1e-192 676.4 741 50.1
Sc20g0000660 Simmondsia chinensis HOM05D005077 ORTHO05D006889 3.5e-192 675.6 737 50.1
A05p43000 Brassica napus HOM05D005077 ORTHO05D006889 6.0e-192 674.9 725 51.2
Thhalv10020155m.g Eutrema salsugineum HOM05D005077 ORTHO05D006889 6.0e-192 674.9 729 50.5
AT3G04480 Arabidopsis thaliana HOM05D005077 ORTHO05D006889 2.3e-191 672.9 728 49.9
BcaC05g30222 Brassica carinata HOM05D005077 ORTHO05D006889 3.0e-191 672.5 728 51.2
ECA238G3062 Erigeron canadensis HOM05D005077 ORTHO05D006889 3.9e-191 672.2 736 49.9
BcaB04g19332 Brassica carinata HOM05D005077 ORTHO05D006889 5.1e-191 671.8 729 50.6
BraA03t12537Z Brassica rapa HOM05D005077 ORTHO05D006889 5.1e-191 671.8 726 51.1
Solyc04g010080.3 Solanum lycopersicum HOM05D005077 ORTHO05D006889 6.6e-191 671.4 739 49.5
A03p33620 Brassica napus HOM05D005077 ORTHO05D006889 8.6e-191 671.0 731 50.9
BraA05t23044Z Brassica rapa HOM05D005077 ORTHO05D006889 8.6e-191 671.0 729 50.8
AL3G14430 Arabidopsis lyrata HOM05D005077 ORTHO05D006889 3.3e-190 669.1 727 49.8
EL10Ac9g21459 Beta vulgaris HOM05D005077 ORTHO05D006889 1.6e-189 666.8 744 49.5
Sopen04g005220 Solanum pennellii HOM05D005077 ORTHO05D006889 1.6e-189 666.8 739 49.1
Carub.0003s0364 Capsella rubella HOM05D005077 ORTHO05D006889 2.1e-189 666.4 728 50.1
BolC3t16351H Brassica oleracea HOM05D005077 ORTHO05D006889 4.7e-189 665.2 733 51.4
BcaC05g29939 Brassica carinata HOM05D005077 ORTHO05D006889 1.1e-188 664.1 725 50.5
Aa31LG5G14920 Aethionema arabicum HOM05D005077 ORTHO05D006889 3.4e-187 659.1 750 49.1
BcaC01g04375 Brassica carinata HOM05D005077 ORTHO05D006889 4.4e-187 658.7 730 50.1
C03p40820 Brassica napus HOM05D005077 ORTHO05D006889 4.4e-187 658.7 730 50.1
PGSC0003DMG400011494 Solanum tuberosum HOM05D005077 ORTHO05D006889 5.8e-187 658.3 764 47.5
Rhsim05G0172000 Rhododendron simsii HOM05D005077 ORTHO05D006889 4.1e-185 652.1 768 48.7
HPP92_014753 Vanilla planifolia HOM05D005077 ORTHO05D006889 2.3e-183 646.4 742 48.5
Os02g0810450 Oryza sativa ssp. japonica HOM05D005077 ORTHO05D006889 6.6e-183 644.8 742 48.0
FAN09G0372 Fragaria x ananassa HOM05D005077 ORTHO05D006889 1.5e-182 643.7 771 46.7
FAN14G3018 Fragaria x ananassa HOM05D005077 ORTHO05D006889 3.6e-181 639.0 773 46.7
ClCG11G010550 Citrullus lanatus HOM05D005077 ORTHO05D006889 4.7e-181 638.6 741 48.7
Lsat_1_v5_gn_2_108321 Lactuca sativa HOM05D005077 ORTHO05D006889 8.1e-181 637.9 733 48.4
Cpa.g.sc306.8 Carica papaya HOM05D005077 ORTHO05D006889 1.4e-180 637.1 663 51.0
FAN14G2113 Fragaria x ananassa HOM05D005077 ORTHO05D006889 5.2e-180 635.2 774 46.4
CSS0033596 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D006889 4.4e-179 632.1 669 51.9
Sabra19G0032000 Salix brachista HOM05D005077 ORTHO05D006889 6.4e-178 628.2 828 44.7
Lj2A44T74 Lonicera japonica HOM05D005077 ORTHO05D006889 2.4e-177 626.3 800 46.6
arahy.Tifrunner.gnm1.ann1.2V8KIQ Arachis hypogaea HOM05D005077 ORTHO05D006889 1.5e-174 617.1 739 47.1
Hund06905 Selenicereus undatus HOM05D005077 ORTHO05D006889 2.8e-173 612.8 753 46.9
arahy.Tifrunner.gnm1.ann1.FVV1VG Arachis hypogaea HOM05D005077 ORTHO05D006889 3.2e-169 599.4 757 45.4
Atru.chr2.993 Acer truncatum HOM05D005077 ORTHO05D006889 1.2e-168 597.4 606 53.5
AUR62013106 Chenopodium quinoa HOM05D005077 ORTHO05D006889 1.2e-168 597.4 759 44.9
vmacro19987 Vaccinium macrocarpon HOM05D005077 ORTHO05D006889 4.6e-168 595.5 810 43.8
QL07p018541 Quercus lobata HOM05D005077 ORTHO05D006889 9.6e-166 587.8 659 49.0
BcaC05g30195 Brassica carinata HOM05D005077 ORTHO05D006889 8.1e-165 584.7 722 46.1
DCAR_003547 Daucus carota HOM05D005077 ORTHO05D006889 6.9e-164 581.6 757 44.6
Ciclev10019185m.g Citrus clementina HOM05D005077 ORTHO05D006889 9.9e-163 577.8 665 47.1
Peaxi162Scf00528g00225 Petunia axillaris HOM05D005077 ORTHO05D006889 4.9e-162 575.5 732 44.8
Gohir.A11G246900 Gossypium hirsutum HOM05D005077 ORTHO05D006889 1.9e-158 563.5 668 47.0
Lalb_Chr22g0358841 Lupinus albus HOM05D005077 ORTHO05D006889 8.2e-157 558.1 666 45.3
arahy.Tifrunner.gnm1.ann1.BW8NI8 Arachis hypogaea HOM05D005077 ORTHO05D006889 1.1e-156 557.8 733 43.9
Nitab4.5_0003780g0090 Nicotiana tabacum HOM05D005077 ORTHO05D006889 2.0e-155 553.5 723 43.6
Cc02_g08770 Coffea canephora HOM05D005077 ORTHO05D006889 8.4e-154 548.1 661 46.0
SGA_v2.0_scaffold1G00651 Striga asiatica HOM05D005077 ORTHO05D006889 1.6e-152 543.9 806 41.1
Sabra13G0043400 Salix brachista HOM05D005077 ORTHO05D006889 2.1e-152 543.5 700 44.4
unitig_748.g6990 Utricularia gibba HOM05D005077 ORTHO05D006889 1.2e-147 527.7 728 43.4
CsaV3_2G009810 Cucumis sativus L. HOM05D005077 ORTHO05D006889 3.2e-145 519.6 658 45.3
arahy.Tifrunner.gnm1.ann1.2UET99 Arachis hypogaea HOM05D005077 ORTHO05D006889 4.6e-144 515.8 740 41.9
Dinv35947 Davidia involucrata HOM05D005077 ORTHO05D006889 1.2e-139 501.1 564 51.4
CAN.G786.40 Capsicum annuum HOM05D005077 ORTHO05D006889 3.7e-133 479.6 630 43.7
AagrBONN_evm.TU.Sc2ySwM_362.1555 Anthoceros agrestis HOM05D005077 ORTHO05D006889 3.4e-131 473.0 790 38.0
arahy.Tifrunner.gnm1.ann1.CACA61 Arachis hypogaea HOM05D005077 ORTHO05D006889 2.9e-130 469.9 733 40.4
Hma1.2p1_0114F.1_g055300 Hydrangea macrophylla HOM05D005077 ORTHO05D006889 1.5e-126 457.6 622 44.1
Zm00001eb258450 Zea mays HOM05D005077 ORTHO05D006889 1.2e-123 448.0 628 41.9
Haze_04419 Corylus avellana HOM05D005077 ORTHO05D006889 5.9e-123 445.7 893 34.3
Pp3c11_830 Physcomitrium patens HOM05D005077 ORTHO05D006889 1.4e-119 434.5 561 43.9
Eucgr.B02424 Eucalyptus grandis HOM05D005077 ORTHO05D006889 5.7e-118 429.1 435 50.6
SMO348G0068 Selaginella moellendorffii HOM05D005077 ORTHO05D006889 3.5e-115 419.9 531 45.4
Sp3g03330 Schrenkiella parvula HOM05D005077 ORTHO05D006889 1.9e-113 414.1 412 52.7
Mapoly0027s0145 Marchantia polymorpha HOM05D005077 ORTHO05D006889 7.2e-113 412.1 577 42.1
CBR_g3613 Chara braunii HOM05D005077 ORTHO05D006889 1.5e-110 404.4 624 39.6
Oeu041238.1 Olea europaea HOM05D005077 ORTHO05D006889 1.1e-97 361.7 656 38.6
AUR62010111 Chenopodium quinoa HOM05D005077 ORTHO05D006889 2.8e-96 357.1 376 51.1
SEGI_09343 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 3.0e-82 310.5 392 45.4
PGSC0003DMG400019115 Solanum tuberosum HOM05D005077 ORTHO05D006889 7.5e-78 295.8 242 64.5
SEGI_01626 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 4.0e-71 273.5 373 42.1
MCO10G045 Micromonas commoda HOM05D005077 ORTHO05D006889 1.1e-68 265.4 615 30.7
Cre01.g033091 Chlamydomonas reinhardtii HOM05D005077 ORTHO05D006889 4.0e-55 220.3 173 60.1
SHI22754 Sapria himalayana HOM05D005077 ORTHO05D006889 1.3e-48 198.7 161 65.2
PRCOL_00005667 Prasinoderma coloniale HOM05D005077 ORTHO05D006889 1.8e-47 194.9 619 27.1
FAN05G3606 Fragaria x ananassa HOM05D005077 ORTHO05D019498 1.8e-42 178.3 184 45.7
FAN05G0362 Fragaria x ananassa HOM05D005077 ORTHO05D006889 1.3e-37 162.2 146 55.5
BcaC01g04372 Brassica carinata HOM05D003677 ORTHO05D004231 3.8e-37 160.6 102 77.5
SEGI_03702 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 6.0e-35 153.3 139 53.2
SEGI_18706 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 6.0e-35 153.3 139 53.2
Lalb_Chr22g0358851 Lupinus albus HOM05D005077 ORTHO05D006889 1.3e-34 152.1 77 90.9
QL07p018546 Quercus lobata HOM05D005077 ORTHO05D006889 6.7e-34 149.8 77 88.3
Cc02_g08780 Coffea canephora HOM05D005077 ORTHO05D006889 9.7e-33 146.0 77 85.7
Cfa026934 Carpinus fangiana HOM05D005077 ORTHO05D006889 3.7e-32 144.1 205 42.9
C08p13010 Brassica napus HOM05D005077 ORTHO05D006889 4.5e-22 110.5 56 91.1
Peaxi162Scf00528g00025 Petunia axillaris HOM05D000011 ORTHO05D015719 2.4e-15 88.2 64 64.1
PGSC0003DMG400019116 Solanum tuberosum HOM05D005077 ORTHO05D018175 4.1e-15 87.4 94 43.6
EL10Ac5g11645 Beta vulgaris HOM05D005077 ORTHO05D006889 2.0e-14 85.1 47 78.7
BcaC05g29940 Brassica carinata HOM05D005077 ORTHO05D018175 1.0e-13 82.8 191 34.6
Atru.chr2.994 Acer truncatum HOM05D005077 ORTHO05D018175 1.5e-09 68.9 68 52.9
CSS0009313 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D018175 6.3e-08 63.5 77 45.5
Hund05190 Selenicereus undatus HOM05D005077 ORTHO05D006889 6.3e-08 63.5 56 55.4
CSS0021399 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D018175 5.9e-06 57.0 67 49.3


User provided reference genes

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