Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0204 Ceratophyllum demersum HOM05D005177 ORTHO05D006175 1.4e-63 246.1 124 100.0
CDE04G2914 Ceratophyllum demersum HOM05D005177 ORTHO05D006175 8.8e-42 173.7 98 89.8
CDE07G1541 Ceratophyllum demersum HOM05D005177 ORTHO05D006175 2.0e-33 146.0 91 81.3
TAR636G0661 Trochodendron aralioides HOM05D005177 ORTHO05D006175 3.6e-27 125.2 89 69.7
Nn2g10682 Nelumbo nucifera HOM05D005177 ORTHO05D006175 4.7e-27 124.8 89 66.3
Gohir.D02G184700 Gossypium hirsutum HOM05D005177 ORTHO05D006175 2.0e-25 119.4 89 62.9
Gorai.005G207000 Gossypium raimondii HOM05D005177 ORTHO05D006175 2.0e-25 119.4 89 62.9
Manes.11G141500 Manihot esculenta HOM05D005177 ORTHO05D006175 3.3e-25 118.6 88 61.4
vmacro14462 Vaccinium macrocarpon HOM05D005177 ORTHO05D006175 4.4e-25 118.2 91 63.7
Sopen11g030050 Solanum pennellii HOM05D005177 ORTHO05D006175 5.7e-25 117.9 89 64.0
Nitab4.5_0001802g0050 Nicotiana tabacum HOM05D005177 ORTHO05D006175 7.5e-25 117.5 89 64.0
ATR1159G017 Amborella trichopoda HOM05D005177 ORTHO05D006175 9.7e-25 117.1 96 58.3
Dinv32787 Davidia involucrata HOM05D005177 ORTHO05D006175 9.7e-25 117.1 89 61.8
QL01p037260 Quercus lobata HOM05D005177 ORTHO05D006175 9.7e-25 117.1 89 62.9
CAN.G553.3 Capsicum annuum HOM05D005177 ORTHO05D006175 2.2e-24 115.9 89 62.9
Lalb_Chr01g0004161 Lupinus albus HOM05D005177 ORTHO05D006175 2.2e-24 115.9 89 60.7
Nitab4.5_0002129g0070 Nicotiana tabacum HOM05D005177 ORTHO05D006175 2.2e-24 115.9 89 61.8
Aqoxy230s004 Aquilegia oxysepala HOM05D000156 ORTHO05D002600 2.8e-24 115.5 93 55.9
Peaxi162Scf00389g00939 Petunia axillaris HOM05D005177 ORTHO05D006175 2.8e-24 115.5 92 60.9
QL01p037240 Quercus lobata HOM05D005177 ORTHO05D006175 2.8e-24 115.5 89 60.7
Thecc.09G260100 Theobroma cacao HOM05D005177 ORTHO05D006175 2.8e-24 115.5 89 60.7
Actinidia03746 Actinidia chinensis HOM05D005177 ORTHO05D006175 3.7e-24 115.2 89 61.8
Dinv14445 Davidia involucrata HOM05D005177 ORTHO05D006175 3.7e-24 115.2 89 59.6
PGSC0003DMG400027405 Solanum tuberosum HOM05D005177 ORTHO05D006175 3.7e-24 115.2 89 61.8
Gohir.A03G161400 Gossypium hirsutum HOM05D005177 ORTHO05D006175 4.8e-24 114.8 89 60.7
Zm00001eb265420 Zea mays HOM05D005177 ORTHO05D006175 6.3e-24 114.4 89 62.9
Duzib168G0988 Durio zibethinus HOM05D005177 ORTHO05D006175 8.2e-24 114.0 90 57.8
Migut.D02184 Erythranthe guttata HOM05D005177 ORTHO05D006175 8.2e-24 114.0 89 64.0
Prupe.6G094900 Prunus persica HOM05D005177 ORTHO05D006175 8.2e-24 114.0 89 61.8
Aqoxy4G03211 Aquilegia oxysepala HOM05D005177 ORTHO05D006175 1.1e-23 113.6 91 56.0
QL01p037225 Quercus lobata HOM05D005177 ORTHO05D006175 1.1e-23 113.6 89 59.6
Sc06g0010530 Simmondsia chinensis HOM05D005177 ORTHO05D006175 1.4e-23 113.2 90 60.0
Solyc11g072400.3 Solanum lycopersicum HOM05D005177 ORTHO05D006175 1.4e-23 113.2 89 61.8
MSTRG.18639 Avicennia marina HOM05D005177 ORTHO05D006175 2.4e-23 112.5 89 62.9
Glyma.11G153378 Glycine max HOM05D005177 ORTHO05D006175 2.4e-23 112.5 89 58.4
Lj3g0023073 Lotus japonicus HOM05D005177 ORTHO05D006175 2.4e-23 112.5 89 59.6
Lalb_Chr03g0027131 Lupinus albus HOM05D005177 ORTHO05D006175 3.1e-23 112.1 89 60.7
MD03G1105200 Malus domestica HOM05D005177 ORTHO05D006175 3.1e-23 112.1 89 60.7
Rhsim01G0220100 Rhododendron simsii HOM05D005177 ORTHO05D006175 3.1e-23 112.1 91 58.2
COL.COLO4_25245 Corchorus olitorius HOM05D005177 ORTHO05D006175 4.1e-23 111.7 89 59.6
Os05g0123300 Oryza sativa ssp. japonica HOM05D005177 ORTHO05D006175 4.1e-23 111.7 89 59.6
Cc01_g11530 Coffea canephora HOM05D005177 ORTHO05D006175 5.3e-23 111.3 89 61.8
Dinv01415 Davidia involucrata HOM05D005177 ORTHO05D006175 7.0e-23 110.9 89 58.4
SGA_v2.0_scaffold97G29176 Striga asiatica HOM05D005177 ORTHO05D006175 7.0e-23 110.9 89 61.8
TPR.G14917 Trifolium pratense HOM05D005177 ORTHO05D006175 7.0e-23 110.9 89 57.3
TWI79G0119 Tripterygium wilfordii HOM05D005177 ORTHO05D006175 7.0e-23 110.9 89 58.4
Atru.chr3.3689 Acer truncatum HOM05D005177 ORTHO05D006175 9.1e-23 110.5 89 58.4
Duzib170G1166 Durio zibethinus HOM05D005177 ORTHO05D006175 9.1e-23 110.5 89 57.3
Ciclev10028554m.g Citrus clementina HOM05D005177 ORTHO05D006175 1.6e-22 109.8 89 59.6
PSO063G2407 Papaver somniferum HOM05D005177 ORTHO05D006175 1.6e-22 109.8 89 58.4
PSO339G4756 Papaver somniferum HOM05D005177 ORTHO05D006175 1.6e-22 109.8 89 58.4
CSS0008980 Camellia sinensis var. sinensis HOM05D005177 ORTHO05D006175 2.0e-22 109.4 89 60.7
CiPaw.13G107200 Carya illinoinensis HOM05D005177 ORTHO05D006175 2.0e-22 109.4 90 58.9
CiPaw.13G107400 Carya illinoinensis HOM05D005177 ORTHO05D006175 2.0e-22 109.4 90 58.9
CiPaw.13G107500 Carya illinoinensis HOM05D005177 ORTHO05D006175 2.0e-22 109.4 89 58.4
Phvul.011G072700 Phaseolus vulgaris HOM05D005177 ORTHO05D006175 2.0e-22 109.4 89 56.2
PGR102G1116 Punica granatum HOM05D005177 ORTHO05D006175 2.0e-22 109.4 89 59.6
VMungo1127G2232 Vigna mungo HOM05D005177 ORTHO05D006175 2.0e-22 109.4 89 56.2
Oeu005908.1 Olea europaea HOM05D005177 ORTHO05D006175 4.5e-22 108.2 88 58.0
CANSAT54G2759 Cannabis sativa HOM05D005177 ORTHO05D006175 5.9e-22 107.8 89 58.4
Psat0s137g0200 Pisum sativum HOM05D005177 ORTHO05D006175 1.0e-21 107.1 89 55.1
TWI31G0237 Tripterygium wilfordii HOM05D005177 ORTHO05D006175 1.0e-21 107.1 89 56.2
Cfa011363 Carpinus fangiana HOM05D005177 ORTHO05D006175 1.3e-21 106.7 90 56.7
RcHm_v2.0_Chr5g0060611 Rosa chinensis HOM05D005177 ORTHO05D006175 2.2e-21 105.9 89 59.6
unitig_899.g14907 Utricularia gibba HOM05D005177 ORTHO05D006175 3.8e-21 105.1 89 58.4
CiPaw.13G107600 Carya illinoinensis HOM05D005177 ORTHO05D006175 8.5e-21 104.0 89 55.1
EL10Ac9g22467 Beta vulgaris HOM05D005177 ORTHO05D006175 1.1e-20 103.6 89 56.2
GSVIVG01025137001 Vitis vinifera HOM05D005177 ORTHO05D006175 1.1e-20 103.6 89 57.3
arahy.Tifrunner.gnm1.ann1.Q9R44R Arachis hypogaea HOM05D005177 ORTHO05D006175 1.9e-20 102.8 89 56.2
arahy.Tifrunner.gnm1.ann1.X56S8K Arachis hypogaea HOM05D005177 ORTHO05D006175 1.9e-20 102.8 89 56.2
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 1.9e-20 102.8 89 55.1
Mapoly0004s0234 Marchantia polymorpha HOM05D005177 ORTHO05D006175 2.5e-20 102.4 92 53.3
Medtr4g060790 Medicago truncatula HOM05D005177 ORTHO05D006175 2.5e-20 102.4 89 53.9
SMO143G0224 Selaginella moellendorffii HOM05D005177 ORTHO05D006175 2.5e-20 102.4 88 55.7
Hund08273 Selenicereus undatus HOM05D005177 ORTHO05D006175 3.2e-20 102.1 90 54.4
RcHm_v2.0_Chr5g0060621 Rosa chinensis HOM05D005177 ORTHO05D006175 4.2e-20 101.7 83 56.6
Haze_23911 Corylus avellana HOM05D005177 ORTHO05D006175 1.2e-19 100.1 89 53.9
Haze_23912 Corylus avellana HOM05D005177 ORTHO05D006175 1.2e-19 100.1 89 53.9
DCAR_006046 Daucus carota HOM05D005177 ORTHO05D006175 1.2e-19 100.1 89 55.1
Pp3c24_6040 Physcomitrium patens HOM05D005177 ORTHO05D006175 1.2e-19 100.1 90 51.1
Ah.01g015010 Amaranthus hybridus HOM05D005177 ORTHO05D006175 1.6e-19 99.8 89 53.9
FvH4_3g33260 Fragaria vesca HOM05D005177 ORTHO05D006175 1.6e-19 99.8 89 53.9
FAN21G0634 Fragaria x ananassa HOM05D005177 ORTHO05D006175 1.6e-19 99.8 90 53.3
THA.LOC104814837 Tarenaya hassleriana HOM05D005177 ORTHO05D006175 1.6e-19 99.8 90 52.2
PSO339G4079 Papaver somniferum HOM05D005177 ORTHO05D006175 6.1e-19 97.8 91 54.9
Cpa.g.sc139.70 Carica papaya HOM05D005177 ORTHO05D006175 8.0e-19 97.4 89 53.9
MELO3C025749.2 Cucumis melo HOM05D005177 ORTHO05D006175 8.0e-19 97.4 89 51.7
CsaV3_6G021650 Cucumis sativus L. HOM05D005177 ORTHO05D006175 8.0e-19 97.4 89 51.7
ECA238G1817 Erigeron canadensis HOM05D000382 ORTHO05D000391 1.4e-18 96.7 92 53.3
PSO384G3506 Papaver somniferum HOM05D005177 ORTHO05D006175 1.4e-18 96.7 91 53.8
AUR62006522 Chenopodium quinoa HOM05D005177 ORTHO05D006175 1.8e-18 96.3 89 52.8
Eucgr.B02471 Eucalyptus grandis HOM05D005177 ORTHO05D006175 2.3e-18 95.9 89 53.9
Aa31LG1G12430 Aethionema arabicum HOM05D005177 ORTHO05D006175 6.8e-18 94.4 91 50.5
ClCG02G020960 Citrullus lanatus HOM05D005177 ORTHO05D006175 6.8e-18 94.4 97 48.5
Lsat_1_v5_gn_2_50980 Lactuca sativa HOM05D005177 ORTHO05D006175 6.8e-18 94.4 90 55.6
HanXRQChr14g0433031 Helianthus annuus HOM05D005177 ORTHO05D006175 8.8e-18 94.0 88 54.5
Phvul.007G036300 Phaseolus vulgaris HOM05D005177 ORTHO05D006175 1.2e-17 93.6 91 53.8
Lj3g0021588 Lotus japonicus HOM05D005177 ORTHO05D006175 1.5e-17 93.2 85 56.5
HPP92_013896 Vanilla planifolia HOM05D005177 ORTHO05D006175 1.5e-17 93.2 77 51.9
Ca_11098_v3 Cicer arietinum L. HOM05D005177 ORTHO05D006175 2.0e-17 92.8 91 52.7
Sed0002828 Sechium edule HOM05D005177 ORTHO05D005441 2.6e-17 92.4 89 48.3
Carub.0008s2107 Capsella rubella HOM05D005177 ORTHO05D006175 4.4e-17 91.7 91 49.5
VMungo0251G1016 Vigna mungo HOM05D005177 ORTHO05D006175 4.4e-17 91.7 92 52.2
AT5G60370 Arabidopsis thaliana HOM05D005177 ORTHO05D006175 5.7e-17 91.3 91 49.5
CARHR274040 Cardamine hirsuta HOM05D005177 ORTHO05D006175 7.5e-17 90.9 92 48.9
CBR_g2921 Chara braunii HOM05D005177 ORTHO05D006175 7.5e-17 90.9 88 50.0
Thhalv10013696m.g Eutrema salsugineum HOM05D005177 ORTHO05D006175 7.5e-17 90.9 88 50.0
AL8G36980 Arabidopsis lyrata HOM05D005177 ORTHO05D006175 9.8e-17 90.5 91 48.4
BraA02t05734Z Brassica rapa HOM05D005177 ORTHO05D006175 9.8e-17 90.5 91 47.3
BcaB05g22637 Brassica carinata HOM05D000280 ORTHO05D000632 1.3e-16 90.1 91 49.5
C02p11760 Brassica napus HOM05D005177 ORTHO05D006175 1.3e-16 90.1 91 47.3
BolC2t07273H Brassica oleracea HOM05D005177 ORTHO05D006175 1.3e-16 90.1 91 48.4
BcaC03g13978 Brassica carinata HOM05D005177 ORTHO05D006175 1.7e-16 89.7 91 47.3
Sp6g21970 Schrenkiella parvula HOM05D005177 ORTHO05D006175 4.8e-16 88.2 91 48.4
Lj5g0027081 Lotus japonicus HOM05D005177 ORTHO05D006175 6.3e-16 87.8 87 52.9
SHI06048 Sapria himalayana HOM05D005177 ORTHO05D006175 1.1e-15 87.0 89 49.4
Lalb_Chr06g0165641 Lupinus albus HOM05D005177 ORTHO05D006175 2.4e-15 85.9 97 49.5
Psat6g221840 Pisum sativum HOM05D005177 ORTHO05D006175 4.1e-15 85.1 91 48.4
Glyma.20G125100 Glycine max HOM05D005177 ORTHO05D006175 1.9e-12 76.3 84 48.8
Medtr1g062090 Medicago truncatula HOM05D005177 ORTHO05D006175 3.0e-10 68.9 64 50.0
Haze_23910 Corylus avellana HOM05D005177 ORTHO05D006175 7.5e-09 64.3 73 49.3


User provided reference genes

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