Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0188 Ceratophyllum demersum HOM05D003801 ORTHO05D004812 4.2e-136 488.0 250 100.0
CDE04G3388 Ceratophyllum demersum HOM05D003801 ORTHO05D004812 1.5e-80 303.5 224 76.3
CDE07G0464 Ceratophyllum demersum HOM05D003801 ORTHO05D004812 1.4e-70 270.4 201 77.1
Nn5g27878 Nelumbo nucifera HOM05D003801 ORTHO05D004812 1.3e-60 237.3 225 59.6
TAR623G1445 Trochodendron aralioides HOM05D003801 ORTHO05D004812 2.9e-60 236.1 225 60.0
PGR004G1069 Punica granatum HOM05D003801 ORTHO05D004812 3.8e-60 235.7 222 59.5
Nn1g08532 Nelumbo nucifera HOM05D003801 ORTHO05D004812 4.9e-60 235.3 225 60.0
Sc17g0002560 Simmondsia chinensis HOM05D003801 ORTHO05D004812 3.2e-59 232.6 225 58.2
TAR369G0201 Trochodendron aralioides HOM05D003801 ORTHO05D004812 3.2e-59 232.6 224 59.4
Manes.18G140750 Manihot esculenta HOM05D003801 ORTHO05D004812 4.2e-59 232.3 225 57.3
Cpa.g.sc173.16 Carica papaya HOM05D003801 ORTHO05D004812 9.3e-59 231.1 225 56.9
CANSAT54G0450 Cannabis sativa HOM05D003801 ORTHO05D004812 1.6e-58 230.3 225 57.8
ClCG03G000210 Citrullus lanatus HOM05D003801 ORTHO05D004812 2.7e-58 229.6 225 58.2
CiPaw.13G066600 Carya illinoinensis HOM05D003801 ORTHO05D004812 4.6e-58 228.8 225 58.2
Dinv28708 Davidia involucrata HOM05D003801 ORTHO05D004812 4.6e-58 228.8 226 58.4
Thecc.09G360800 Theobroma cacao HOM05D003801 ORTHO05D004812 4.6e-58 228.8 225 56.9
Glyma.14G201500 Glycine max HOM05D003801 ORTHO05D004812 1.3e-57 227.3 225 56.0
MSTRG.18544 Avicennia marina HOM05D003801 ORTHO05D004812 2.3e-57 226.5 225 56.0
Duzib168G2305 Durio zibethinus HOM05D003801 ORTHO05D004812 2.3e-57 226.5 225 56.4
Prupe.6G045000 Prunus persica HOM05D003801 ORTHO05D004812 3.0e-57 226.1 225 56.9
Atru.chr1.2566 Acer truncatum HOM05D003801 ORTHO05D004812 3.9e-57 225.7 225 56.9
Atru.chr1.2574 Acer truncatum HOM05D003801 ORTHO05D004812 3.9e-57 225.7 225 56.9
AUR62036227 Chenopodium quinoa HOM05D003801 ORTHO05D004812 3.9e-57 225.7 225 56.9
Sed0013919 Sechium edule HOM05D003801 ORTHO05D004812 3.9e-57 225.7 225 56.4
CsaV3_1G036690 Cucumis sativus L. HOM05D003801 ORTHO05D004812 5.1e-57 225.3 225 57.3
TWI75G1891 Tripterygium wilfordii HOM05D003801 ORTHO05D004812 5.1e-57 225.3 225 56.4
MD03G1058800 Malus domestica HOM05D003801 ORTHO05D004812 6.7e-57 224.9 225 56.9
Peaxi162Scf00095g00168 Petunia axillaris HOM05D003801 ORTHO05D004812 6.7e-57 224.9 225 55.6
Aqoxy2G00749 Aquilegia oxysepala HOM05D003801 ORTHO05D004812 8.7e-57 224.6 225 56.9
GSVIVG01024601001 Vitis vinifera HOM05D003801 ORTHO05D004812 8.7e-57 224.6 222 58.1
AUR62009720 Chenopodium quinoa HOM05D003801 ORTHO05D004812 1.1e-56 224.2 225 56.9
Haze_24439 Corylus avellana HOM05D003801 ORTHO05D004812 1.1e-56 224.2 225 57.8
TWI79G0650 Tripterygium wilfordii HOM05D003801 ORTHO05D004812 1.5e-56 223.8 225 56.4
Eucgr.B04013 Eucalyptus grandis HOM05D003801 ORTHO05D004812 1.9e-56 223.4 224 56.2
Sabra19G0125000 Salix brachista HOM05D003801 ORTHO05D004812 1.9e-56 223.4 225 55.1
Sabra19G0130000 Salix brachista HOM05D003801 ORTHO05D004812 1.9e-56 223.4 225 55.1
Gohir.D03G144200 Gossypium hirsutum HOM05D003801 ORTHO05D004812 2.5e-56 223.0 225 56.4
Gorai.003G151500 Gossypium raimondii HOM05D003801 ORTHO05D004812 2.5e-56 223.0 225 56.4
MELO3C020500.2 Cucumis melo HOM05D003801 ORTHO05D004812 3.3e-56 222.6 225 56.9
DCAR_028861 Daucus carota HOM05D003801 ORTHO05D004812 3.3e-56 222.6 226 57.1
Potri.013G154300 Populus trichocarpa HOM05D003801 ORTHO05D004812 3.3e-56 222.6 225 54.7
Cfa011800 Carpinus fangiana HOM05D003801 ORTHO05D004812 4.3e-56 222.2 225 57.3
Gohir.A03G024300 Gossypium hirsutum HOM05D003801 ORTHO05D004812 7.4e-56 221.5 225 56.4
CSS0002946 Camellia sinensis var. sinensis HOM05D003801 ORTHO05D004812 9.6e-56 221.1 225 56.4
Hma1.2p1_1637F.1_g294880 Hydrangea macrophylla HOM05D003801 ORTHO05D004812 9.6e-56 221.1 225 56.9
EL10Ac7g15867 Beta vulgaris HOM05D003801 ORTHO05D004812 1.3e-55 220.7 225 56.4
Glyma.02G233700 Glycine max HOM05D003801 ORTHO05D004812 1.3e-55 220.7 225 54.7
Oeu044915.1 Olea europaea HOM05D003801 ORTHO05D004812 1.3e-55 220.7 225 55.6
QL01p018072 Quercus lobata HOM05D003801 ORTHO05D004812 1.6e-55 220.3 225 56.4
Sopen09g014770 Solanum pennellii HOM05D003801 ORTHO05D004812 1.6e-55 220.3 225 55.1
FvH4_3g40080 Fragaria vesca HOM05D003801 ORTHO05D004812 2.1e-55 219.9 222 55.4
FAN16G2780 Fragaria x ananassa HOM05D003801 ORTHO05D004812 2.1e-55 219.9 222 55.4
Migut.D00836 Erythranthe guttata HOM05D003801 ORTHO05D004812 2.8e-55 219.5 226 55.3
RcHm_v2.0_Chr5g0072271 Rosa chinensis HOM05D003801 ORTHO05D004812 2.8e-55 219.5 222 55.4
Sabra13G0124100 Salix brachista HOM05D003801 ORTHO05D004812 2.8e-55 219.5 225 53.8
Potri.019G127000 Populus trichocarpa HOM05D003801 ORTHO05D004812 3.7e-55 219.2 225 53.3
Solyc09g031780.3 Solanum lycopersicum HOM05D003801 ORTHO05D004812 3.7e-55 219.2 225 54.7
Medtr3g466170 Medicago truncatula HOM05D003801 ORTHO05D004812 4.8e-55 218.8 225 55.1
arahy.Tifrunner.gnm1.ann1.WCY7KD Arachis hypogaea HOM05D003801 ORTHO05D004812 8.2e-55 218.0 225 54.7
A08p35840 Brassica napus HOM05D003801 ORTHO05D004812 8.2e-55 218.0 227 55.9
C08p02740 Brassica napus HOM05D003801 ORTHO05D004812 8.2e-55 218.0 227 55.9
BraA08t35491Z Brassica rapa HOM05D003801 ORTHO05D004812 8.2e-55 218.0 227 55.9
LjContig00141g0011314 Lotus japonicus HOM05D003801 ORTHO05D004812 8.2e-55 218.0 225 56.4
Carub.0001s0624 Capsella rubella HOM05D003801 ORTHO05D004812 1.1e-54 217.6 227 54.6
Hund05047 Selenicereus undatus HOM05D003801 ORTHO05D004812 1.1e-54 217.6 225 54.7
VMungo0647G2088 Vigna mungo HOM05D003801 ORTHO05D004812 1.1e-54 217.6 225 53.8
BcaC05g24660 Brassica carinata HOM05D003801 ORTHO05D004812 1.4e-54 217.2 227 55.5
BolC5t29277H Brassica oleracea HOM05D003801 ORTHO05D004812 1.4e-54 217.2 227 55.5
arahy.Tifrunner.gnm1.ann1.Z7TKRX Arachis hypogaea HOM05D003801 ORTHO05D004812 1.8e-54 216.9 225 54.2
BcaB02g06769 Brassica carinata HOM05D003801 ORTHO05D004812 3.1e-54 216.1 227 55.5
BolC8t47069H Brassica oleracea HOM05D003801 ORTHO05D004812 3.1e-54 216.1 226 55.8
FAN11G2663 Fragaria x ananassa HOM05D003801 ORTHO05D004812 4.1e-54 215.7 209 57.4
Sp1g05660 Schrenkiella parvula HOM05D003801 ORTHO05D004812 4.1e-54 215.7 227 55.1
A10p05480 Brassica napus HOM05D003801 ORTHO05D004812 6.9e-54 214.9 227 55.1
BraA10t42811Z Brassica rapa HOM05D003801 ORTHO05D004812 6.9e-54 214.9 227 55.1
Cc01_g15070 Coffea canephora HOM05D003801 ORTHO05D004812 6.9e-54 214.9 228 55.3
ECA247G0395 Erigeron canadensis HOM05D003801 ORTHO05D004812 6.9e-54 214.9 226 54.4
Lj1A123G49 Lonicera japonica HOM05D003801 ORTHO05D004812 6.9e-54 214.9 225 55.6
FAN21G1607 Fragaria x ananassa HOM05D003801 ORTHO05D004812 9.0e-54 214.5 209 57.4
Aa31LG5G6380 Aethionema arabicum HOM05D003801 ORTHO05D004812 1.5e-53 213.8 228 54.4
HanXRQChr08g0228441 Helianthus annuus HOM05D003801 ORTHO05D004812 1.5e-53 213.8 226 53.5
AL1G16990 Arabidopsis lyrata HOM05D003801 ORTHO05D004812 2.0e-53 213.4 227 54.2
CAN.G1702.5 Capsicum annuum HOM05D003801 ORTHO05D004812 2.0e-53 213.4 225 53.3
Psat2g052760 Pisum sativum HOM05D003801 ORTHO05D004812 2.0e-53 213.4 225 54.7
MSTRG.17901 Avicennia marina HOM05D003801 ORTHO05D004812 4.5e-53 212.2 225 54.2
Phvul.008G250000 Phaseolus vulgaris HOM05D003801 ORTHO05D004812 7.6e-53 211.5 225 53.3
Ca_13017_v3 Cicer arietinum L. HOM05D003801 ORTHO05D004812 1.0e-52 211.1 225 52.4
Sabra19G0125100 Salix brachista HOM05D003801 ORTHO05D004812 1.0e-52 211.1 213 54.9
Thhalv10006671m.g Eutrema salsugineum HOM05D003801 ORTHO05D004812 1.7e-52 210.3 227 53.3
Glyma.18G055700 Glycine max HOM05D003801 ORTHO05D004812 1.7e-52 210.3 225 53.3
PSO384G0852 Papaver somniferum HOM05D003801 ORTHO05D004812 1.7e-52 210.3 225 54.2
Lalb_Chr10g0103681 Lupinus albus HOM05D003801 ORTHO05D004812 2.2e-52 209.9 225 54.7
TPR.G24942 Trifolium pratense HOM05D003801 ORTHO05D004812 2.9e-52 209.5 225 52.0
CARHR006620 Cardamine hirsuta HOM05D003801 ORTHO05D004812 3.8e-52 209.1 227 53.7
Ca_05689_v3 Cicer arietinum L. HOM05D003801 ORTHO05D004812 1.1e-51 207.6 225 52.0
Lsat_1_v5_gn_9_14381 Lactuca sativa HOM05D003801 ORTHO05D004812 1.1e-51 207.6 229 53.3
Medtr5g074690 Medicago truncatula HOM05D003801 ORTHO05D004812 1.1e-51 207.6 225 54.2
PSO339G1799 Papaver somniferum HOM05D003801 ORTHO05D004812 1.1e-51 207.6 225 53.8
AT1G06950 Arabidopsis thaliana HOM05D003801 ORTHO05D004812 1.4e-51 207.2 227 53.3
FAN25G2625 Fragaria x ananassa HOM05D003801 ORTHO05D004812 3.2e-51 206.1 207 55.6
ATR0584G141 Amborella trichopoda HOM05D003801 ORTHO05D004812 7.9e-50 201.4 210 55.2
Rhsim13G0062300 Rhododendron simsii HOM05D003801 ORTHO05D004812 1.3e-49 200.7 226 51.8
Psat5g150840 Pisum sativum HOM05D003801 ORTHO05D004812 1.8e-49 200.3 222 50.9
unitig_747.g21451 Utricularia gibba HOM05D003801 ORTHO05D004812 5.1e-49 198.7 207 54.6
Dinv12256 Davidia involucrata HOM05D003801 ORTHO05D004812 3.3e-48 196.1 200 57.0
MD11G1060900 Malus domestica HOM05D003801 ORTHO05D004812 4.3e-48 195.7 243 50.6
Actinidia32598 Actinidia chinensis HOM05D003801 ORTHO05D004812 6.3e-47 191.8 226 52.2
vmacro02901 Vaccinium macrocarpon HOM05D003801 ORTHO05D004812 2.0e-45 186.8 225 49.3
Zm00001eb044910 Zea mays HOM05D003801 ORTHO05D004812 7.7e-45 184.9 225 48.4
TPR.G17744 Trifolium pratense HOM05D003801 ORTHO05D004812 1.0e-44 184.5 225 49.8
SGA_v2.0_scaffold20G09298 Striga asiatica HOM05D003801 ORTHO05D004812 2.2e-44 183.3 225 46.7
Mapoly0002s0142 Marchantia polymorpha HOM05D003801 ORTHO05D004812 1.4e-43 180.6 227 45.8
COL.COLO4_11183 Corchorus olitorius HOM05D003801 ORTHO05D004812 7.2e-43 178.3 175 56.6
SEGI_40714 Sequoiadendron giganteum HOM05D003801 ORTHO05D004812 7.2e-43 178.3 226 44.2
Sabra19G0125200 Salix brachista HOM05D003801 ORTHO05D004812 3.6e-42 176.0 225 48.0
Pp3c14_10270 Physcomitrium patens HOM05D003801 ORTHO05D004812 4.6e-42 175.6 225 43.6
Pp3c17_6540 Physcomitrium patens HOM05D003801 ORTHO05D004812 2.3e-41 173.3 225 43.1
SHI19243 Sapria himalayana HOM05D003801 ORTHO05D004812 2.2e-39 166.8 226 40.3
Cc01_g14940 Coffea canephora HOM05D003801 ORTHO05D004812 3.8e-36 156.0 190 48.9
QL05p056751 Quercus lobata HOM05D003801 ORTHO05D004812 2.5e-35 153.3 225 44.4
QL05p055919 Quercus lobata HOM05D003801 ORTHO05D004812 3.0e-33 146.4 225 43.1
Eucgr.I01027 Eucalyptus grandis HOM05D003801 ORTHO05D004812 5.2e-33 145.6 102 73.5
Hma1.2p1_1586F.1_g292110 Hydrangea macrophylla HOM05D003801 ORTHO05D004812 6.3e-31 138.7 226 43.4
SMO347G0592 Selaginella moellendorffii HOM05D003801 ORTHO05D004812 6.3e-31 138.7 224 37.5
Hma1.2p1_0613F.1_g189200 Hydrangea macrophylla HOM05D003801 ORTHO05D004812 5.0e-28 129.0 225 38.7
CBR_g29785 Chara braunii HOM05D003801 ORTHO05D004812 4.1e-22 109.4 201 34.3
Lj6A615T91 Lonicera japonica HOM05D003801 ORTHO05D004812 5.3e-22 109.0 102 57.8
HPP92_014541 Vanilla planifolia HOM05D003801 ORTHO05D004812 2.5e-19 100.1 87 59.8
C05p05030 Brassica napus HOM05D001129 ORTHO05D003814 4.2e-19 99.4 214 35.5
Ciclev10000209m.g Citrus clementina HOM05D003801 ORTHO05D004812 8.3e-15 85.1 66 68.2
MCO16G620 Micromonas commoda HOM05D003801 ORTHO05D004812 1.4e-14 84.3 205 27.8
PRCOL_00000154 Prasinoderma coloniale HOM05D003801 ORTHO05D004812 2.1e-10 70.5 225 28.0


User provided reference genes

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