Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0145 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 5.0e-120 434.5 226 100.0
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 1.0e-51 207.6 117 88.0
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 1.7e-51 206.8 117 88.0
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 3.8e-51 205.7 117 87.2
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 3.8e-51 205.7 117 88.0
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 3.8e-51 205.7 117 88.0
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 1.4e-50 203.8 117 86.3
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 1.9e-50 203.4 117 87.2
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 2.5e-50 203.0 117 85.5
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 2.5e-50 203.0 117 87.2
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 3.2e-50 202.6 117 86.3
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 4.2e-50 202.2 117 85.5
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 5.5e-50 201.8 117 85.5
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 5.5e-50 201.8 117 84.6
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 5.5e-50 201.8 117 85.5
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 5.5e-50 201.8 117 85.5
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 5.5e-50 201.8 117 85.5
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 5.5e-50 201.8 117 86.3
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 5.5e-50 201.8 117 85.5
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 9.3e-50 201.1 117 85.5
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 9.3e-50 201.1 117 84.6
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.2e-49 200.7 117 84.6
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 1.2e-49 200.7 117 85.5
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 1.2e-49 200.7 117 85.5
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 1.2e-49 200.7 117 84.6
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 1.6e-49 200.3 117 84.6
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 2.1e-49 199.9 117 85.5
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 2.1e-49 199.9 117 83.8
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 2.7e-49 199.5 117 84.6
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 2.7e-49 199.5 117 83.8
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 2.7e-49 199.5 117 84.6
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 3.5e-49 199.1 117 85.5
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 3.5e-49 199.1 117 83.8
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 3.5e-49 199.1 117 84.6
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 4.6e-49 198.7 117 83.8
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 4.6e-49 198.7 117 82.9
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 6.1e-49 198.4 117 84.6
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 6.1e-49 198.4 117 84.6
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 7.9e-49 198.0 117 84.6
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 7.9e-49 198.0 117 84.6
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 1.0e-48 197.6 117 82.9
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 1.0e-48 197.6 117 82.9
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 1.0e-48 197.6 117 82.1
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 1.3e-48 197.2 117 82.9
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 1.8e-48 196.8 117 82.1
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.8e-48 196.8 117 82.9
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 2.3e-48 196.4 117 82.9
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 2.3e-48 196.4 117 83.8
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 2.3e-48 196.4 117 83.8
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 3.0e-48 196.1 117 82.9
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 3.0e-48 196.1 117 82.9
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 3.9e-48 195.7 117 83.8
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 3.9e-48 195.7 117 82.1
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 3.9e-48 195.7 117 82.9
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 6.7e-48 194.9 117 81.2
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 8.7e-48 194.5 118 84.7
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 8.7e-48 194.5 118 84.7
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 8.7e-48 194.5 117 82.1
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 1.5e-47 193.7 117 79.5
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 1.9e-47 193.4 117 82.9
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 1.9e-47 193.4 117 82.9
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 1.9e-47 193.4 117 84.6
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 1.9e-47 193.4 117 82.1
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 2.5e-47 193.0 117 82.9
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 2.5e-47 193.0 118 83.9
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 2.5e-47 193.0 117 83.8
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 3.3e-47 192.6 119 82.4
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 3.3e-47 192.6 133 74.4
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 3.3e-47 192.6 117 81.2
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 3.3e-47 192.6 117 81.2
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 4.3e-47 192.2 118 83.9
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 4.3e-47 192.2 121 81.0
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 5.7e-47 191.8 117 82.1
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 7.4e-47 191.4 117 81.2
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 7.4e-47 191.4 117 80.3
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 9.7e-47 191.0 117 83.8
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 1.6e-46 190.3 117 79.5
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 2.2e-46 189.9 117 83.8
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 2.8e-46 189.5 117 82.9
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 2.8e-46 189.5 120 80.0
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 2.8e-46 189.5 117 82.1
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 3.7e-46 189.1 117 82.9
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 4.8e-46 188.7 117 83.8
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 6.3e-46 188.3 117 82.9
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 8.2e-46 188.0 117 79.5
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 1.1e-45 187.6 117 80.3
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 1.4e-45 187.2 117 81.2
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 1.8e-45 186.8 117 81.2
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 3.1e-45 186.0 117 82.1
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 5.3e-45 185.3 117 78.6
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 5.3e-45 185.3 117 78.6
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 2.2e-43 179.9 117 76.9
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 1.9e-42 176.8 117 78.6
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 2.5e-42 176.4 116 77.6
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 4.2e-42 175.6 175 60.0
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 2.0e-39 166.8 104 79.8
Cc07_g03900 Coffea canephora HOM05D005960 ORTHO05D007537 7.4e-39 164.9 98 78.6
AUR62018149 Chenopodium quinoa HOM05D005960 ORTHO05D007537 2.8e-38 162.9 95 82.1
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 2.8e-38 162.9 118 69.5
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 4.8e-38 162.2 97 79.4
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 1.4e-37 160.6 118 72.0
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 7.4e-31 138.3 117 62.4
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 7.0e-29 131.7 118 60.2
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 9.1e-29 131.3 115 60.0
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 2.6e-28 129.8 119 58.0
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 9.1e-21 104.8 140 46.4
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 1.6e-17 94.0 117 52.1
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 5.7e-15 85.5 145 36.6
PRCOL_00003347 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 9.8e-07 58.2 62 45.2


User provided reference genes

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