Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0143 Ceratophyllum demersum HOM05D005203 ORTHO05D006383 1.9e-164 582.4 288 100.0
TWI75G1664 Tripterygium wilfordii HOM05D005203 ORTHO05D006383 1.1e-111 407.1 287 67.9
MD05G1138700 Malus domestica HOM05D005203 ORTHO05D006383 1.4e-111 406.8 288 67.4
Thecc.02G146000 Theobroma cacao HOM05D005203 ORTHO05D006383 1.4e-111 406.8 287 69.0
Lj5A171G136 Lonicera japonica HOM05D005203 ORTHO05D006383 3.2e-111 405.6 290 66.6
Dinv41871 Davidia involucrata HOM05D005203 ORTHO05D006383 5.4e-111 404.8 287 67.9
MD10G1141600 Malus domestica HOM05D005203 ORTHO05D006383 5.4e-111 404.8 289 66.4
ATR0807G194 Amborella trichopoda HOM05D005203 ORTHO05D006383 7.1e-111 404.4 289 67.8
Glyma.06G000300 Glycine max HOM05D005203 ORTHO05D006383 1.2e-110 403.7 287 67.9
PSO170G2598 Papaver somniferum HOM05D005203 ORTHO05D006383 1.6e-110 403.3 287 67.6
PSO210G4213 Papaver somniferum HOM05D005203 ORTHO05D006383 1.6e-110 403.3 287 67.9
Glyma.04G000400 Glycine max HOM05D005203 ORTHO05D006383 2.1e-110 402.9 287 67.6
Aqoxy5G00999 Aquilegia oxysepala HOM05D005203 ORTHO05D006383 4.6e-110 401.7 285 68.1
Prupe.8G179800 Prunus persica HOM05D005203 ORTHO05D006383 6.0e-110 401.4 287 67.2
CiPaw.06G115500 Carya illinoinensis HOM05D005203 ORTHO05D006383 1.0e-109 400.6 287 67.2
CSS0012413 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 2.3e-109 399.4 287 66.6
CANSAT25G3783 Cannabis sativa HOM05D005203 ORTHO05D006383 2.3e-109 399.4 287 67.2
Nn6g31681 Nelumbo nucifera HOM05D005203 ORTHO05D006383 3.0e-109 399.1 289 67.5
Potri.009G168000 Populus trichocarpa HOM05D005203 ORTHO05D006383 3.0e-109 399.1 287 66.6
Os02g0832800 Oryza sativa ssp. japonica HOM05D005203 ORTHO05D006383 3.9e-109 398.7 287 69.3
Lj1g0021981 Lotus japonicus HOM05D005203 ORTHO05D006383 5.1e-109 398.3 287 66.6
TPR.G38553 Trifolium pratense HOM05D005203 ORTHO05D006383 5.1e-109 398.3 287 66.9
FAN27G1508 Fragaria x ananassa HOM05D005203 ORTHO05D006383 6.6e-109 397.9 288 67.0
Medtr3g118520 Medicago truncatula HOM05D005203 ORTHO05D006383 6.6e-109 397.9 288 67.0
Manes.11G110000 Manihot esculenta HOM05D005203 ORTHO05D006383 8.7e-109 397.5 287 65.9
Nitab4.5_0000783g0090 Nicotiana tabacum HOM05D005203 ORTHO05D006383 1.1e-108 397.1 289 67.1
Peaxi162Scf00362g00132 Petunia axillaris HOM05D005203 ORTHO05D006383 1.1e-108 397.1 286 67.1
Sopen01g054300 Solanum pennellii HOM05D005203 ORTHO05D006383 1.5e-108 396.7 285 69.1
VMungo1309G0298 Vigna mungo HOM05D005203 ORTHO05D006383 1.5e-108 396.7 288 64.9
Ciclev10028418m.g Citrus clementina HOM05D005203 ORTHO05D006383 1.9e-108 396.4 287 67.2
RcHm_v2.0_Chr6g0280891 Rosa chinensis HOM05D005203 ORTHO05D006383 1.9e-108 396.4 288 67.0
Gohir.D12G014000 Gossypium hirsutum HOM05D005203 ORTHO05D006383 5.6e-108 394.8 287 65.9
QL11p056319 Quercus lobata HOM05D005203 ORTHO05D006383 1.3e-107 393.7 285 66.7
Gohir.A12G013200 Gossypium hirsutum HOM05D005203 ORTHO05D006383 1.6e-107 393.3 287 65.5
FvH4_2g16770 Fragaria vesca HOM05D005203 ORTHO05D006383 2.1e-107 392.9 287 66.6
Solyc01g112240.4 Solanum lycopersicum HOM05D005203 ORTHO05D006383 4.8e-107 391.7 283 68.9
Ca_15273_v3 Cicer arietinum L. HOM05D005203 ORTHO05D006383 6.2e-107 391.3 287 65.9
CsaV3_7G001910 Cucumis sativus L. HOM05D005203 ORTHO05D006383 1.4e-106 390.2 287 65.9
Gorai.008G014000 Gossypium raimondii HOM05D005203 ORTHO05D006383 1.4e-106 390.2 285 65.6
Phvul.009G115600 Phaseolus vulgaris HOM05D005203 ORTHO05D006383 1.4e-106 390.2 287 65.9
FAN15G3115 Fragaria x ananassa HOM05D005203 ORTHO05D006383 4.0e-106 388.7 287 66.2
Migut.B00006 Erythranthe guttata HOM05D005203 ORTHO05D006383 5.3e-106 388.3 289 64.4
MBI05_g33297_MAGBIO Magnolia biondii HOM05D005203 ORTHO05D006383 5.3e-106 388.3 266 69.9
SalBow1G5214 Salvia bowleyana HOM05D005203 ORTHO05D006383 1.5e-105 386.7 290 65.9
GSVIVG01002028001 Vitis vinifera HOM05D005203 ORTHO05D006383 1.5e-105 386.7 288 64.6
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 2.0e-105 386.3 289 64.4
Cfa005369 Carpinus fangiana HOM05D005203 ORTHO05D006383 4.4e-105 385.2 288 64.2
MELO3C013249.2 Cucumis melo HOM05D005203 ORTHO05D006383 4.4e-105 385.2 287 65.5
Potri.004G206900 Populus trichocarpa HOM05D005203 ORTHO05D006383 4.4e-105 385.2 289 65.4
Carub.0007s0018 Capsella rubella HOM05D005203 ORTHO05D006383 5.8e-105 384.8 287 64.5
BolC7t46794H Brassica oleracea HOM05D005203 ORTHO05D006383 9.9e-105 384.0 289 63.0
Sp7g37480 Schrenkiella parvula HOM05D005203 ORTHO05D006383 1.7e-104 383.3 287 64.5
AT4G38240 Arabidopsis thaliana HOM05D005203 ORTHO05D006383 2.2e-104 382.9 288 66.3
BNapus_Darmor_BZH_scaffold_146p00070 Brassica napus HOM05D005203 ORTHO05D006383 2.2e-104 382.9 289 63.0
ECA246G3822 Erigeron canadensis HOM05D005203 ORTHO05D006383 2.2e-104 382.9 282 63.5
Lsat_1_v5_gn_3_48560 Lactuca sativa HOM05D005203 ORTHO05D006383 2.9e-104 382.5 289 63.0
Lsat_1_v5_gn_4_71380 Lactuca sativa HOM05D005203 ORTHO05D006383 2.9e-104 382.5 291 63.2
Atru.chr5.3533 Acer truncatum HOM05D005203 ORTHO05D006383 4.9e-104 381.7 292 65.1
BraA06t27778Z Brassica rapa HOM05D005203 ORTHO05D006383 6.4e-104 381.3 289 63.0
THA.LOC104824732 Tarenaya hassleriana HOM05D005203 ORTHO05D006383 8.4e-104 380.9 287 65.2
HanXRQChr15g0476431 Helianthus annuus HOM05D005203 ORTHO05D006383 1.1e-103 380.6 289 63.0
MSTRG.19946 Avicennia marina HOM05D005203 ORTHO05D006383 2.4e-103 379.4 287 63.1
Dinv14173 Davidia involucrata HOM05D005203 ORTHO05D006383 2.4e-103 379.4 320 58.8
ClCG02G003410 Citrullus lanatus HOM05D005203 ORTHO05D006383 3.2e-103 379.0 298 62.8
HanXRQChr10g0298431 Helianthus annuus HOM05D005203 ORTHO05D006383 7.1e-103 377.9 289 61.9
FAN24G3349 Fragaria x ananassa HOM05D005203 ORTHO05D006383 2.1e-102 376.3 282 65.6
BcaNung01996 Brassica carinata HOM05D005203 ORTHO05D006383 4.6e-102 375.2 294 62.6
Eucgr.H04989 Eucalyptus grandis HOM05D005203 ORTHO05D006383 7.9e-102 374.4 285 63.5
AL7G10160 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 2.3e-101 372.9 287 63.1
arahy.Tifrunner.gnm1.ann1.H6WGQ1 Arachis hypogaea HOM05D005203 ORTHO05D006383 3.9e-101 372.1 279 65.2
PGR042G0992 Punica granatum HOM05D005203 ORTHO05D006383 3.9e-101 372.1 286 64.7
Actinidia20576 Actinidia chinensis HOM05D005203 ORTHO05D006383 6.6e-101 371.3 281 64.1
Cc09_g10810 Coffea canephora HOM05D005203 ORTHO05D006383 1.1e-100 370.5 279 65.9
ECA234G1180 Erigeron canadensis HOM05D005203 ORTHO05D006383 1.9e-100 369.8 279 62.7
Sed0018804 Sechium edule HOM05D005203 ORTHO05D006383 1.3e-99 367.1 285 62.5
CARHR294030 Cardamine hirsuta HOM05D005203 ORTHO05D006383 2.4e-98 362.8 287 61.3
Thhalv10025208m.g Eutrema salsugineum HOM05D005203 ORTHO05D006383 3.1e-98 362.5 284 63.0
CiPaw.05G093000 Carya illinoinensis HOM05D005203 ORTHO05D006383 8.4e-96 354.4 285 63.5
Lalb_Chr08g0246871 Lupinus albus HOM05D005203 ORTHO05D006383 9.3e-95 350.9 274 61.3
Zm00001eb421090 Zea mays HOM05D005203 ORTHO05D006383 9.3e-95 350.9 228 73.7
PGSC0003DMG402014680 Solanum tuberosum HOM05D005203 ORTHO05D006383 1.6e-94 350.1 219 76.3
CAN.G1725.2 Capsicum annuum HOM05D005203 ORTHO05D006383 2.7e-94 349.4 219 77.2
Sc18g0005820 Simmondsia chinensis HOM05D005203 ORTHO05D006383 1.5e-92 343.6 250 66.0
Psat5g000480 Pisum sativum HOM05D005203 ORTHO05D006383 2.6e-89 332.8 206 75.7
SMO201G0157 Selaginella moellendorffii HOM05D005203 ORTHO05D006383 3.4e-89 332.4 281 57.3
Rhsim11G0198000 Rhododendron simsii HOM05D005203 ORTHO05D006383 7.6e-89 331.3 255 64.3
Oeu006117.1 Olea europaea HOM05D005203 ORTHO05D006383 1.3e-88 330.5 207 73.9
Eucgr.L00584 Eucalyptus grandis HOM05D005203 ORTHO05D006383 3.0e-85 319.3 181 79.6
vmacro02339 Vaccinium macrocarpon HOM05D005203 ORTHO05D006383 5.1e-85 318.5 492 39.0
Pp3c22_17330 Physcomitrium patens HOM05D005203 ORTHO05D006383 3.3e-84 315.8 287 56.1
CSS0022527 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 4.3e-84 315.5 232 65.5
CSS0021914 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 7.4e-84 314.7 232 65.5
arahy.Tifrunner.gnm1.ann1.Z16TJ0 Arachis hypogaea HOM05D005203 ORTHO05D006383 1.1e-82 310.8 279 57.7
Mapoly0041s0049 Marchantia polymorpha HOM05D005203 ORTHO05D006383 9.0e-82 307.8 287 54.0
Sabra09G0130500 Salix brachista HOM05D005203 ORTHO05D006383 1.1e-79 300.8 289 55.0
Haze_02001 Corylus avellana HOM05D005203 ORTHO05D006383 1.4e-79 300.4 187 75.4
TAR376G0977 Trochodendron aralioides HOM05D005203 ORTHO05D006383 4.6e-78 295.4 235 61.7
Pp3c12_4490 Physcomitrium patens HOM05D005203 ORTHO05D006383 4.8e-75 285.4 226 59.7
Cfa005368 Carpinus fangiana HOM05D005203 ORTHO05D006383 2.0e-73 280.0 184 72.3
HPP92_022155 Vanilla planifolia HOM05D005203 ORTHO05D006383 2.0e-73 280.0 261 58.6
DCAR_026076 Daucus carota HOM05D005203 ORTHO05D006383 2.6e-73 279.6 269 52.0
Cpa.g.c28580 Carica papaya HOM05D005203 ORTHO05D006383 5.9e-73 278.5 246 58.1
SGA_v2.0_scaffold399G50809 Striga asiatica HOM05D005203 ORTHO05D006383 6.5e-72 275.0 319 48.0
Aa31LG1G14200 Aethionema arabicum HOM05D005203 ORTHO05D006383 2.5e-71 273.1 239 56.9
Hund06364 Selenicereus undatus HOM05D005203 ORTHO05D006383 2.5e-71 273.1 289 51.2
AagrBONN_evm.TU.Sc2ySwM_362.2915 Anthoceros agrestis HOM05D005203 ORTHO05D006383 9.4e-71 271.2 294 51.0
COL.COLO4_19776 Corchorus olitorius HOM05D005203 ORTHO05D006383 1.4e-69 267.3 261 54.8
Eucgr.L00583 Eucalyptus grandis HOM05D005203 ORTHO05D006383 5.7e-68 261.9 152 78.9
HPP92_004948 Vanilla planifolia HOM05D005203 ORTHO05D006383 3.7e-67 259.2 235 56.6
Sabra04G0139200 Salix brachista HOM05D005203 ORTHO05D006383 1.0e-64 251.1 239 54.8
CSS0033501 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 2.9e-64 249.6 163 71.2
CSS0046634 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 2.9e-64 249.6 163 71.2
CSS0007702 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 5.5e-63 245.4 163 69.9
CBR_g40811 Chara braunii HOM05D005203 ORTHO05D006383 1.4e-61 240.7 191 59.2
AUR62013174 Chenopodium quinoa HOM05D005203 ORTHO05D006383 1.0e-56 224.6 286 47.6
EL10Ac9g21529 Beta vulgaris HOM05D005203 ORTHO05D006383 3.8e-56 222.6 228 53.1
MCO10G329 Micromonas commoda HOM05D005203 ORTHO05D006383 1.7e-48 197.2 187 51.9
AUR62010173 Chenopodium quinoa HOM05D005203 ORTHO05D006383 8.3e-43 178.3 216 46.3
GSVIVG01002907001 Vitis vinifera HOM05D005203 ORTHO05D006383 4.1e-42 176.0 95 85.3
TAR628G1330 Trochodendron aralioides HOM05D005203 ORTHO05D006383 5.2e-37 159.1 165 52.1
MCO01G683 Micromonas commoda HOM05D005203 ORTHO05D006383 2.9e-32 143.3 186 40.3
AL7G13060 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 8.0e-30 135.2 107 63.6
CANSAT78G0806 Cannabis sativa HOM05D005203 ORTHO05D006383 4.6e-25 119.4 107 57.9
SEGI_16108 Sequoiadendron giganteum HOM05D005203 ORTHO05D006383 3.2e-18 96.7 74 59.5
AL6G14740 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 2.1e-14 84.0 45 80.0
CAN.G533.11 Capsicum annuum HOM05D005203 ORTHO05D006383 3.6e-14 83.2 48 72.9
Ah.01g009970 Amaranthus hybridus HOM05D005203 ORTHO05D006383 1.9e-10 70.9 34 79.4


User provided reference genes

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