Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0141 Ceratophyllum demersum HOM05D005347 ORTHO05D021808 7.0e-237 823.5 411 100.0
CDE05G2234 Ceratophyllum demersum HOM05D005347 ORTHO05D007838 6.3e-222 773.9 398 96.7
Glyma.10G097800 Glycine max HOM05D005347 ORTHO05D007838 2.0e-212 742.3 398 90.7
Ca_26018_v3 Cicer arietinum L. HOM05D005347 ORTHO05D007838 3.0e-211 738.4 398 89.7
Nn7g36281 Nelumbo nucifera HOM05D005347 ORTHO05D007838 1.1e-210 736.5 398 91.2
Phvul.007G252700 Phaseolus vulgaris HOM05D005347 ORTHO05D007838 4.3e-210 734.6 398 89.2
MELO3C023131.2 Cucumis melo HOM05D005347 ORTHO05D007838 7.3e-210 733.8 398 90.7
Manes.08G050600 Manihot esculenta HOM05D005347 ORTHO05D007838 2.1e-209 732.3 398 89.7
Cfa016819 Carpinus fangiana HOM05D005347 ORTHO05D007838 3.6e-209 731.5 398 89.4
VMungo1383G0107 Vigna mungo HOM05D005347 ORTHO05D007838 3.6e-209 731.5 398 89.4
CiPaw.10G033300 Carya illinoinensis HOM05D005347 ORTHO05D007838 4.7e-209 731.1 398 89.4
CsaV3_4G011730 Cucumis sativus L. HOM05D005347 ORTHO05D007838 6.2e-209 730.7 398 90.2
Glyma.19G139300 Glycine max HOM05D005347 ORTHO05D007838 1.1e-208 729.9 398 89.4
Nn2g15252 Nelumbo nucifera HOM05D005347 ORTHO05D007838 1.1e-208 729.9 398 89.9
ClCG04G000090 Citrullus lanatus HOM05D005347 ORTHO05D007838 2.3e-208 728.8 398 90.2
Lalb_Chr25g0287111 Lupinus albus HOM05D005347 ORTHO05D007838 2.3e-208 728.8 398 88.2
TPR.G10615 Trifolium pratense HOM05D005347 ORTHO05D007838 2.3e-208 728.8 398 88.7
Glyma.03G137000 Glycine max HOM05D005347 ORTHO05D007838 6.8e-208 727.2 398 88.7
arahy.Tifrunner.gnm1.ann1.XR90DA Arachis hypogaea HOM05D005347 ORTHO05D007838 8.9e-208 726.9 398 88.9
PSO384G4351 Papaver somniferum HOM05D005347 ORTHO05D007838 1.2e-207 726.5 398 88.2
Psat6g120040 Pisum sativum HOM05D005347 ORTHO05D007838 1.2e-207 726.5 398 88.4
Aqoxy2G00152 Aquilegia oxysepala HOM05D005347 ORTHO05D007838 1.5e-207 726.1 398 88.4
arahy.Tifrunner.gnm1.ann1.RSU8B2 Arachis hypogaea HOM05D005347 ORTHO05D007838 1.5e-207 726.1 398 88.9
Lj1g0017211 Lotus japonicus HOM05D005347 ORTHO05D007838 1.5e-207 726.1 398 88.4
Potri.006G051100 Populus trichocarpa HOM05D005347 ORTHO05D007838 1.5e-207 726.1 398 89.2
TAR465G0003 Trochodendron aralioides HOM05D005347 ORTHO05D007838 1.5e-207 726.1 398 89.7
MBI17_g13973_MAGBIO Magnolia biondii HOM05D005347 ORTHO05D007838 2.6e-207 725.3 409 88.0
Actinidia38547 Actinidia chinensis HOM05D005347 ORTHO05D007838 9.8e-207 723.4 398 88.9
Eucgr.A02348 Eucalyptus grandis HOM05D005347 ORTHO05D007838 9.8e-207 723.4 398 88.2
PSO339G0901 Papaver somniferum HOM05D005347 ORTHO05D007838 9.8e-207 723.4 398 87.9
Sed0003738 Sechium edule HOM05D005347 ORTHO05D007838 9.8e-207 723.4 398 88.7
Prupe.7G061100 Prunus persica HOM05D005347 ORTHO05D007838 1.7e-206 722.6 398 88.2
Dinv12481 Davidia involucrata HOM05D005347 ORTHO05D007838 2.2e-206 722.2 398 89.2
HPP92_012089 Vanilla planifolia HOM05D005347 ORTHO05D007838 2.2e-206 722.2 398 88.2
Phvul.001G132200 Phaseolus vulgaris HOM05D005347 ORTHO05D007838 3.7e-206 721.5 398 87.4
PGR004G1765 Punica granatum HOM05D005347 ORTHO05D007838 3.7e-206 721.5 400 87.8
Thecc.05G153600 Theobroma cacao HOM05D005347 ORTHO05D007838 3.7e-206 721.5 398 87.9
MSTRG.10814 Avicennia marina HOM05D005347 ORTHO05D007838 4.9e-206 721.1 398 87.9
FAN02G3940 Fragaria x ananassa HOM05D005347 ORTHO05D007838 6.4e-206 720.7 398 87.7
FAN05G5756 Fragaria x ananassa HOM05D005347 ORTHO05D007838 6.4e-206 720.7 398 87.7
MD14G1072000 Malus domestica HOM05D005347 ORTHO05D007838 8.3e-206 720.3 398 87.4
TWI53G0247 Tripterygium wilfordii HOM05D005347 ORTHO05D007838 1.1e-205 719.9 400 87.5
Actinidia17237 Actinidia chinensis HOM05D005347 ORTHO05D007838 2.4e-205 718.8 398 88.2
FAN09G2062 Fragaria x ananassa HOM05D005347 ORTHO05D007838 2.4e-205 718.8 398 87.4
Gohir.A09G122100 Gossypium hirsutum HOM05D005347 ORTHO05D007838 2.4e-205 718.8 398 87.7
Gorai.006G136500 Gossypium raimondii HOM05D005347 ORTHO05D007838 2.4e-205 718.8 398 87.7
Lalb_Chr20g0110491 Lupinus albus HOM05D005347 ORTHO05D007838 3.2e-205 718.4 398 86.7
MD12G1073700 Malus domestica HOM05D005347 ORTHO05D007838 3.2e-205 718.4 398 87.7
Duzib093G0142 Durio zibethinus HOM05D005347 ORTHO05D007838 4.1e-205 718.0 398 87.9
Lsat_1_v5_gn_9_29020 Lactuca sativa HOM05D005347 ORTHO05D007838 4.1e-205 718.0 398 86.9
Lsat_1_v5_gn_9_29121 Lactuca sativa HOM05D005347 ORTHO05D007838 4.1e-205 718.0 398 86.9
RcHm_v2.0_Chr3g0482331 Rosa chinensis HOM05D005347 ORTHO05D007838 5.4e-205 717.6 398 87.4
FvH4_6g23800 Fragaria vesca HOM05D005347 ORTHO05D007838 1.6e-204 716.1 398 87.4
FAN14G0383 Fragaria x ananassa HOM05D005347 ORTHO05D007838 1.6e-204 716.1 398 87.4
Gohir.D09G118200 Gossypium hirsutum HOM05D005347 ORTHO05D007838 1.6e-204 716.1 398 87.4
Duzib128G0418 Durio zibethinus HOM05D005347 ORTHO05D007838 2.7e-204 715.3 398 87.2
Hma1.2p1_2002F.1_g310740 Hydrangea macrophylla HOM05D005347 ORTHO05D007838 4.6e-204 714.5 398 87.2
CSS0016317 Camellia sinensis var. sinensis HOM05D005347 ORTHO05D007838 6.0e-204 714.1 398 86.9
Ciclev10004154m.g Citrus clementina HOM05D005347 ORTHO05D007838 1.7e-203 712.6 398 87.2
SGA_v2.0_scaffold105G30411 Striga asiatica HOM05D005347 ORTHO05D007838 2.3e-203 712.2 398 86.7
Dinv39601 Davidia involucrata HOM05D005347 ORTHO05D007838 3.0e-203 711.8 398 87.2
QL07p000318 Quercus lobata HOM05D005347 ORTHO05D007838 5.1e-203 711.1 413 85.2
SalBow6G2907 Salvia bowleyana HOM05D005347 ORTHO05D007838 5.1e-203 711.1 400 85.5
Zm00001eb433610 Zea mays HOM05D005347 ORTHO05D007838 5.1e-203 711.1 416 84.1
Sc04g0002790 Simmondsia chinensis HOM05D005347 ORTHO05D007838 6.6e-203 710.7 398 87.4
COL.COLO4_28282 Corchorus olitorius HOM05D005347 ORTHO05D007838 8.6e-203 710.3 398 87.9
Cc06_g17100 Coffea canephora HOM05D005347 ORTHO05D007838 1.5e-202 709.5 413 83.8
Atru.chr1.1096 Acer truncatum HOM05D005347 ORTHO05D007838 1.9e-202 709.1 398 87.2
CAN.G676.69 Capsicum annuum HOM05D005347 ORTHO05D007838 3.3e-202 708.4 402 86.1
PGSC0003DMG400027276 Solanum tuberosum HOM05D005347 ORTHO05D007838 3.3e-202 708.4 398 86.9
CARHR199810 Cardamine hirsuta HOM05D005347 ORTHO05D007838 4.3e-202 708.0 398 86.2
AUR62024447 Chenopodium quinoa HOM05D005347 ORTHO05D007838 7.3e-202 707.2 398 86.9
DCAR_013602 Daucus carota HOM05D005347 ORTHO05D007838 1.6e-201 706.1 416 84.6
HanXRQChr10g0296641 Helianthus annuus HOM05D005347 ORTHO05D007838 2.1e-201 705.7 398 85.4
Sp6g30390 Schrenkiella parvula HOM05D005347 ORTHO05D007838 2.8e-201 705.3 398 85.9
Solyc04g015750.3 Solanum lycopersicum HOM05D005347 ORTHO05D007838 2.8e-201 705.3 398 86.7
Sopen04g007830 Solanum pennellii HOM05D005347 ORTHO05D007838 2.8e-201 705.3 398 86.7
AL6G24240 Arabidopsis lyrata HOM05D005347 ORTHO05D007838 3.6e-201 704.9 398 85.7
EL10Ac3g07089 Beta vulgaris HOM05D005347 ORTHO05D007838 3.6e-201 704.9 398 86.4
AUR62026037 Chenopodium quinoa HOM05D005347 ORTHO05D007838 3.6e-201 704.9 398 86.7
Oeu008920.1 Olea europaea HOM05D005347 ORTHO05D007838 3.6e-201 704.9 398 86.2
HanXRQChr10g0288781 Helianthus annuus HOM05D005347 ORTHO05D007838 4.7e-201 704.5 398 85.2
AT5G13630 Arabidopsis thaliana HOM05D005347 ORTHO05D007838 6.2e-201 704.1 398 85.7
Thhalv10012443m.g Eutrema salsugineum HOM05D005347 ORTHO05D007838 8.1e-201 703.7 398 85.4
MD03G1176300 Malus domestica HOM05D005347 ORTHO05D021808 8.1e-201 703.7 399 86.2
Carub.0006s1179 Capsella rubella HOM05D005347 ORTHO05D007838 4.0e-200 701.4 398 85.4
ECA247G2461 Erigeron canadensis HOM05D005347 ORTHO05D007838 4.0e-200 701.4 398 85.4
BcaB01g05345 Brassica carinata HOM05D005347 ORTHO05D007838 1.2e-199 699.9 399 85.7
A03p06120 Brassica napus HOM05D005347 ORTHO05D007838 1.2e-199 699.9 399 85.7
C03p07120 Brassica napus HOM05D005347 ORTHO05D007838 1.2e-199 699.9 399 85.7
BolC3t13211H Brassica oleracea HOM05D005347 ORTHO05D007838 1.2e-199 699.9 399 85.7
BraA03t09944Z Brassica rapa HOM05D005347 ORTHO05D007838 1.2e-199 699.9 399 85.7
Ah.13g076460 Amaranthus hybridus HOM05D005347 ORTHO05D007838 2.6e-199 698.7 398 86.7
Nitab4.5_0010636g0020 Nicotiana tabacum HOM05D005347 ORTHO05D007838 1.3e-198 696.4 398 85.4
Nitab4.5_0005195g0040 Nicotiana tabacum HOM05D005347 ORTHO05D007838 1.7e-198 696.0 398 85.4
Migut.J01759 Erythranthe guttata HOM05D005347 ORTHO05D007838 3.7e-198 694.9 399 84.7
Rhsim04G0102500 Rhododendron simsii HOM05D005347 ORTHO05D007838 3.7e-198 694.9 400 85.2
Aa31sc144G60 Aethionema arabicum HOM05D005347 ORTHO05D007838 1.9e-197 692.6 398 84.9
ATR0626G393 Amborella trichopoda HOM05D005347 ORTHO05D007838 9.2e-197 690.3 398 83.7
Oeu017946.1 Olea europaea HOM05D005347 ORTHO05D007838 3.3e-194 681.8 398 84.4
Sabra06G0035800 Salix brachista HOM05D005347 ORTHO05D007838 9.6e-194 680.2 398 84.4
Cpa.g.sc92.51 Carica papaya HOM05D005347 ORTHO05D007838 2.8e-193 678.7 398 84.4
SEGI_14472 Sequoiadendron giganteum HOM05D005347 ORTHO05D007838 4.0e-192 674.9 398 81.2
Haze_19858 Corylus avellana HOM05D005347 ORTHO05D007838 8.9e-192 673.7 398 83.7
GSVIVG01033277001 Vitis vinifera HOM05D005347 ORTHO05D007838 9.9e-191 670.2 417 81.8
SMO347G0130 Selaginella moellendorffii HOM05D005347 ORTHO05D007838 1.3e-187 659.8 399 78.9
unitig_578.g15983 Utricularia gibba HOM05D005347 ORTHO05D007838 3.6e-185 651.7 423 77.8
Peaxi162Scf00130g00022 Petunia axillaris HOM05D005347 ORTHO05D007838 3.4e-183 645.2 398 81.7
Pp3c10_13960 Physcomitrium patens HOM05D005347 ORTHO05D007838 4.4e-183 644.8 399 77.4
Pp3c10_13970 Physcomitrium patens HOM05D005347 ORTHO05D007838 4.4e-183 644.8 399 77.4
Mapoly0008s0194 Marchantia polymorpha HOM05D005347 ORTHO05D007838 2.9e-182 642.1 399 76.7
AagrBONN_evm.TU.Sc2ySwM_368.2268 Anthoceros agrestis HOM05D005347 ORTHO05D007838 1.4e-181 639.8 399 75.7
CBR_g40549 Chara braunii HOM05D005347 ORTHO05D007838 9.6e-178 627.1 399 73.7
MD09G1118200 Malus domestica HOM05D005347 ORTHO05D007838 8.4e-166 587.4 399 76.4
TAR369G0767 Trochodendron aralioides HOM05D005347 ORTHO05D021808 1.5e-159 566.6 299 92.0
TAR623G0733 Trochodendron aralioides HOM05D005347 ORTHO05D021808 2.2e-158 562.8 299 91.3
MCO07G263 Micromonas commoda HOM05D005347 ORTHO05D007838 6.5e-158 561.2 398 68.1
Lju124C41T11 Lonicera japonica HOM05D005347 ORTHO05D021808 7.1e-157 557.8 299 90.6
vmacro09075 Vaccinium macrocarpon HOM05D005347 ORTHO05D007838 2.3e-155 552.7 375 73.1
BcaB01g05344 Brassica carinata HOM05D005347 ORTHO05D021808 4.5e-151 538.5 299 87.3
Cre07.g325500 Chlamydomonas reinhardtii HOM05D005347 ORTHO05D007838 1.6e-148 530.0 398 64.8
PRCOL_00001535 Prasinoderma coloniale HOM05D005347 ORTHO05D007838 3.6e-148 528.9 398 62.6
Zm00001eb066400 Zea mays HOM05D005347 ORTHO05D007838 5.7e-106 388.7 237 81.9
TPR.G25646 Trifolium pratense HOM05D005347 ORTHO05D007838 4.4e-66 256.1 214 65.9
Zm00001eb066410 Zea mays HOM05D005347 ORTHO05D007838 1.6e-63 247.7 138 84.8
Hma1.2p1_2002F.1_g310730 Hydrangea macrophylla HOM05D005347 ORTHO05D007838 3.8e-41 173.3 101 83.2
Hund05283 Selenicereus undatus HOM05D005347 ORTHO05D007838 1.4e-40 171.4 100 85.0
Cre11.g477625 Chlamydomonas reinhardtii HOM05D005347 ORTHO05D034305 2.1e-39 167.5 419 31.5
MCO07G355 Micromonas commoda HOM05D005347 ORTHO05D034305 9.0e-35 152.1 433 29.1
Lju124A41T48 Lonicera japonica HOM05D005347 ORTHO05D007838 4.2e-24 116.7 74 74.3
Lsat_1_v5_gn_5_109040 Lactuca sativa HOM05D005347 ORTHO05D231332 1.4e-19 101.7 61 83.6
Psat4g101600 Pisum sativum HOM05D000140 ORTHO05D014072 8.8e-14 82.4 109 45.0


User provided reference genes

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