Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 2.9e-179 631.7 307 100.0
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 8.8e-144 513.8 307 79.5
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 7.5e-143 510.8 307 77.9
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 4.9e-142 508.1 307 76.5
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 1.8e-141 506.1 307 76.9
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 9.2e-141 503.8 307 76.2
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 2.7e-140 502.3 307 75.6
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 1.0e-139 500.4 307 74.9
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 1.3e-139 500.0 307 77.2
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 2.3e-139 499.2 307 75.6
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 3.8e-139 498.4 307 75.2
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 5.0e-139 498.0 307 74.9
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 6.6e-139 497.7 307 74.6
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 6.6e-139 497.7 307 74.6
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 5.6e-138 494.6 307 75.6
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 5.6e-138 494.6 307 74.6
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 9.5e-138 493.8 307 75.2
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 1.6e-137 493.0 307 74.3
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 3.6e-137 491.9 307 74.9
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 4.7e-137 491.5 307 73.9
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 6.1e-137 491.1 307 74.9
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 1.0e-136 490.3 307 75.9
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 1.8e-136 489.6 307 74.3
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 3.0e-136 488.8 307 74.3
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 3.0e-136 488.8 307 74.6
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 4.0e-136 488.4 307 75.2
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 1.5e-135 486.5 307 73.6
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 1.5e-135 486.5 307 74.9
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 2.6e-135 485.7 307 72.0
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 3.4e-135 485.3 307 74.6
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 3.4e-135 485.3 306 75.2
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 9.8e-135 483.8 307 73.0
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 9.8e-135 483.8 307 73.3
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 1.3e-134 483.4 307 74.3
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 1.7e-134 483.0 307 72.6
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 1.7e-134 483.0 307 72.6
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 2.2e-134 482.6 307 74.6
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 2.2e-134 482.6 307 72.0
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 2.9e-134 482.3 307 74.3
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 3.7e-134 481.9 307 72.3
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 4.9e-134 481.5 307 73.9
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 4.9e-134 481.5 307 72.0
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 6.4e-134 481.1 307 71.3
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 8.3e-134 480.7 307 73.3
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 1.1e-133 480.3 307 73.3
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 1.8e-133 479.6 307 73.0
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.8e-133 479.6 307 72.6
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 1.8e-133 479.6 307 73.3
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 1.8e-133 479.6 307 71.7
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 2.4e-133 479.2 307 73.3
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 2.4e-133 479.2 306 70.6
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 3.2e-133 478.8 307 73.0
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 3.2e-133 478.8 307 73.3
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 4.1e-133 478.4 307 72.0
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 2.0e-132 476.1 307 71.3
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 2.0e-132 476.1 307 72.6
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 2.3e-131 472.6 307 70.7
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 3.0e-131 472.2 307 72.6
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 5.0e-131 471.5 307 71.3
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 8.6e-131 470.7 307 70.4
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 1.5e-130 469.9 288 75.3
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 1.5e-130 469.9 307 70.4
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 2.5e-130 469.2 323 69.3
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 7.3e-130 467.6 304 69.7
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 1.4e-128 463.4 391 59.3
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 2.3e-128 462.6 307 70.7
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 1.3e-126 456.8 370 62.2
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 1.7e-126 456.4 358 62.3
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 8.6e-123 444.1 307 66.4
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 1.9e-122 443.0 371 58.0
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 4.0e-120 435.3 285 72.3
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 3.4e-119 432.2 307 68.1
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 4.9e-118 428.3 293 70.6
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.6e-116 423.3 277 72.2
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 2.7e-116 422.5 272 69.9
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.7e-115 419.9 276 71.4
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 2.5e-114 416.0 278 69.1
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 3.6e-113 412.1 293 66.6
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 1.8e-112 409.8 312 63.1
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 4.0e-112 408.7 307 63.5
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 3.4e-111 405.6 277 67.1
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 2.4e-109 399.4 312 61.9
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 1.6e-108 396.7 243 74.9
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 1.6e-105 386.7 306 58.8
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 2.0e-103 379.8 235 74.9
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 3.2e-101 372.5 236 76.7
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 4.2e-101 372.1 271 64.9
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 3.5e-100 369.0 307 60.3
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 1.1e-85 320.9 318 52.5
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 2.1e-73 280.0 190 67.4
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 4.1e-72 275.8 265 55.1
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 1.4e-61 240.7 299 45.5
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 7.2e-61 238.4 567 28.9
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 4.8e-57 225.7 284 45.8
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 1.3e-54 217.6 148 72.3
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 3.8e-54 216.1 131 73.3
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.4e-53 214.2 169 66.3
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 5.9e-23 112.5 96 51.0
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 5.0e-22 109.4 88 60.2
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 1.6e-20 104.4 221 30.8
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 8.0e-20 102.1 72 69.4
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 2.9e-17 93.6 72 58.3
Cre06.g298950 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D143024 1.3e-06 58.2 134 30.6
COL.COLO4_34115 Corchorus olitorius HOM05D007381 ORTHO05D159467 3.0e-06 57.0 39 69.2


User provided reference genes

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