Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 2352.8 1167 100.0
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 2125.1 1192 89.8
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 0.0e+00 1931.8 1193 80.3
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 1902.9 1191 78.9
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 0.0e+00 1895.2 1191 78.9
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 0.0e+00 1890.2 1191 78.4
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1889.4 1191 78.0
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 1889.0 1191 78.8
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 1886.7 1191 78.3
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1884.8 1191 77.9
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 0.0e+00 1882.1 1192 77.9
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 0.0e+00 1877.8 1192 78.6
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 0.0e+00 1877.4 1192 78.5
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 0.0e+00 1869.4 1191 78.2
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 0.0e+00 1869.4 1191 78.3
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 1869.0 1191 78.2
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 0.0e+00 1868.6 1193 77.4
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 0.0e+00 1868.2 1192 77.8
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 1867.0 1191 78.2
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 0.0e+00 1866.7 1191 78.0
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 0.0e+00 1866.3 1191 77.7
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 1865.9 1191 77.8
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 0.0e+00 1865.1 1191 77.8
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 0.0e+00 1861.3 1191 77.2
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 1860.9 1191 77.8
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 1860.5 1191 77.5
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 0.0e+00 1859.3 1193 77.1
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 0.0e+00 1859.3 1192 77.5
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 0.0e+00 1858.6 1191 77.7
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 1855.5 1191 77.0
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 0.0e+00 1854.7 1192 77.7
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 0.0e+00 1854.7 1189 77.2
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1854.7 1190 77.2
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 0.0e+00 1854.0 1192 76.9
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 0.0e+00 1850.9 1191 77.4
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 1850.9 1190 77.0
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 0.0e+00 1850.5 1191 77.0
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 0.0e+00 1849.7 1190 77.1
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 0.0e+00 1849.3 1195 77.7
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 0.0e+00 1848.9 1187 77.3
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 0.0e+00 1848.6 1191 76.9
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 0.0e+00 1848.6 1191 77.1
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 1847.4 1193 77.0
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 1846.6 1191 77.2
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 0.0e+00 1846.6 1191 76.5
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 0.0e+00 1846.6 1191 76.8
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 0.0e+00 1846.2 1194 76.9
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 1846.2 1190 77.1
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 0.0e+00 1843.9 1192 76.5
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 0.0e+00 1842.8 1192 77.0
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 0.0e+00 1841.6 1191 75.9
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 1841.2 1192 77.2
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 0.0e+00 1841.2 1191 75.9
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 1841.2 1191 76.5
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 0.0e+00 1840.9 1191 76.0
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 0.0e+00 1840.9 1191 76.2
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 0.0e+00 1840.9 1190 77.2
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 0.0e+00 1840.5 1192 77.3
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 0.0e+00 1840.1 1193 76.2
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 0.0e+00 1840.1 1191 76.0
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 1839.7 1191 76.0
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1839.7 1191 76.9
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 1839.3 1191 75.9
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 0.0e+00 1838.5 1192 76.1
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 1836.6 1191 77.0
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 0.0e+00 1836.6 1190 76.9
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 1836.2 1184 77.1
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 0.0e+00 1835.8 1191 75.7
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 0.0e+00 1835.5 1191 77.0
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 0.0e+00 1835.5 1191 76.6
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 1834.3 1192 76.5
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 0.0e+00 1833.5 1192 76.3
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 1833.5 1167 78.5
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 0.0e+00 1833.2 1190 75.7
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 0.0e+00 1832.0 1191 76.3
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 0.0e+00 1831.2 1191 77.1
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 0.0e+00 1830.8 1191 75.9
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 0.0e+00 1830.5 1191 76.4
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 1827.8 1190 76.6
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 0.0e+00 1826.2 1190 75.5
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 1826.2 1192 76.1
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 0.0e+00 1821.6 1171 76.9
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 0.0e+00 1821.2 1184 76.4
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 1812.7 1176 75.6
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 0.0e+00 1809.3 1194 76.0
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 0.0e+00 1806.6 1173 77.1
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1805.0 1163 77.2
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 0.0e+00 1798.5 1195 74.7
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 0.0e+00 1790.0 1191 74.7
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 1784.6 1192 75.1
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 1779.2 1192 73.0
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 0.0e+00 1775.8 1192 74.6
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1768.4 1192 74.0
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 1766.5 1191 74.2
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 0.0e+00 1757.3 1139 76.6
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 0.0e+00 1746.9 1194 73.1
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 0.0e+00 1707.2 1198 70.1
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 1699.9 1055 78.1
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1698.3 1083 77.9
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 0.0e+00 1651.3 1196 68.4
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 0.0e+00 1624.8 1172 70.1
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 0.0e+00 1620.1 1204 67.2
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1534.2 965 77.1
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 0.0e+00 1520.4 1047 71.6
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1518.1 1167 67.0
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 0.0e+00 1496.9 1052 71.9
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 0.0e+00 1495.3 1013 74.0
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 1483.0 1191 64.7
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 0.0e+00 1370.1 1236 57.9
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 0.0e+00 1276.9 815 77.4
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 1175.6 1260 51.7
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 0.0e+00 1162.1 1320 49.4
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 0.0e+00 1161.7 727 78.5
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 0.0e+00 1145.6 1166 55.7
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 6.7e-309 1064.3 999 59.3
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 1.7e-248 863.6 572 75.3
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 6.6e-248 861.7 730 63.3
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 3.5e-241 839.3 1179 40.1
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 1.9e-207 727.2 529 70.1
TAR636G1691 Trochodendron aralioides HOM05D001937 ORTHO05D007024 8.2e-190 668.7 424 79.5
TAR636G2433 Trochodendron aralioides HOM05D001937 ORTHO05D007024 5.3e-181 639.4 460 72.2
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 8.2e-174 615.5 612 53.8
TAR636G1243 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.0e-139 502.3 345 75.9
CBR_g26059 Chara braunii HOM05D001937 ORTHO05D007024 5.8e-127 459.9 361 65.9
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 1.3e-110 405.6 314 67.8
Oeu061583.3 Olea europaea HOM05D001937 ORTHO05D007024 6.5e-78 297.0 457 42.0
HPP92_019823 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.5e-63 249.2 138 90.6
Lalb_Chr16g0382841 Lupinus albus HOM05D001937 ORTHO05D007024 5.0e-62 244.2 171 75.4
TAR636G3286 Trochodendron aralioides HOM05D001937 ORTHO05D043971 7.4e-50 203.8 117 78.6
ECA234G0635 Erigeron canadensis HOM05D001937 ORTHO05D007024 3.6e-44 184.9 245 46.9
TAR636G2347 Trochodendron aralioides HOM05D001937 ORTHO05D007024 2.2e-38 165.6 91 84.6
HPP92_019822 Vanilla planifolia HOM05D001937 ORTHO05D007024 6.1e-36 157.5 153 58.8
ECA234G4540 Erigeron canadensis HOM05D016619 ORTHO05D007024 5.2e-35 154.5 174 54.6
CBR_g39219 Chara braunii HOM05D001937 ORTHO05D043971 3.1e-32 145.2 100 64.0
SalBow2G0807 Salvia bowleyana HOM05D001937 ORTHO05D007024 1.1e-29 136.7 92 76.1
SalBow1G1280 Salvia bowleyana HOM05D001937 ORTHO05D007024 1.6e-28 132.9 92 73.9
SalBow1G2752 Salvia bowleyana HOM05D001937 ORTHO05D007024 4.0e-27 128.3 92 72.8


User provided reference genes

Program Settings