Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 8.9e-184 646.7 312 100.0
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 1.6e-156 556.2 312 86.9
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 9.4e-109 397.5 305 60.7
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 1.6e-108 396.7 307 60.6
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 4.7e-108 395.2 305 60.3
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 3.0e-107 392.5 305 59.7
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 8.8e-107 391.0 305 60.0
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 2.0e-106 389.8 305 60.3
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 2.0e-106 389.8 307 59.6
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 4.4e-106 388.7 305 59.3
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 5.7e-106 388.3 305 59.3
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 1.7e-105 386.7 310 59.4
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 2.2e-105 386.3 307 59.0
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 4.1e-104 382.1 301 59.1
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 4.1e-104 382.1 306 58.8
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 5.3e-104 381.7 308 57.8
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 7.0e-104 381.3 305 59.7
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 7.0e-104 381.3 307 58.6
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 7.0e-104 381.3 305 58.0
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 7.0e-104 381.3 307 58.0
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 7.0e-104 381.3 307 58.6
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 9.1e-104 380.9 305 58.7
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 9.1e-104 380.9 307 58.0
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 9.1e-104 380.9 305 57.4
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.6e-103 380.2 305 58.0
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 1.6e-103 380.2 305 58.7
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 2.0e-103 379.8 310 58.1
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 3.5e-103 379.0 305 59.0
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 4.5e-103 378.6 305 57.7
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 7.7e-103 377.9 307 58.0
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 1.3e-102 377.1 307 58.6
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 1.7e-102 376.7 305 57.7
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 2.2e-102 376.3 304 57.9
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 3.8e-102 375.6 304 58.2
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 5.0e-102 375.2 313 57.5
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 1.5e-101 373.6 307 58.0
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 1.9e-101 373.2 308 56.8
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 1.9e-101 373.2 307 57.0
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 1.9e-101 373.2 305 59.3
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 2.5e-101 372.9 305 59.3
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 2.5e-101 372.9 305 58.4
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 2.5e-101 372.9 310 56.8
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 2.5e-101 372.9 303 58.7
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 2.5e-101 372.9 305 59.0
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 4.2e-101 372.1 302 58.6
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 4.2e-101 372.1 305 58.4
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 5.5e-101 371.7 305 57.0
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 5.5e-101 371.7 305 58.4
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 9.4e-101 370.9 305 56.7
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.6e-100 370.2 305 57.4
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 2.1e-100 369.8 306 56.9
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 2.7e-100 369.4 305 56.4
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 2.7e-100 369.4 305 56.4
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 2.7e-100 369.4 305 57.0
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 3.6e-100 369.0 305 58.4
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 3.6e-100 369.0 305 58.4
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 6.1e-100 368.2 307 58.3
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 6.1e-100 368.2 305 58.0
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 6.1e-100 368.2 305 56.4
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 8.0e-100 367.9 305 57.0
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 8.0e-100 367.9 305 57.0
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 8.0e-100 367.9 305 57.0
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 8.0e-100 367.9 301 57.1
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 8.0e-100 367.9 307 57.0
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 1.0e-99 367.5 305 56.7
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 1.0e-99 367.5 305 57.0
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 1.4e-99 367.1 305 58.7
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 1.4e-99 367.1 306 56.5
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 1.8e-99 366.7 305 58.0
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 2.3e-99 366.3 305 57.4
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 2.3e-99 366.3 305 57.0
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 2.3e-99 366.3 305 58.0
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 3.0e-99 365.9 305 57.7
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 3.0e-99 365.9 305 56.4
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 4.0e-99 365.5 304 56.6
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 4.0e-99 365.5 307 57.0
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 6.7e-99 364.8 304 58.6
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 6.7e-99 364.8 305 56.1
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 8.8e-99 364.4 305 57.0
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 8.8e-99 364.4 318 55.7
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 1.2e-98 364.0 310 54.2
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 1.5e-98 363.6 308 56.5
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.5e-98 363.6 308 55.8
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 1.5e-98 363.6 306 56.5
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 2.0e-98 363.2 306 56.5
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 3.3e-98 362.5 305 56.4
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 4.4e-98 362.1 305 56.1
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 4.4e-98 362.1 305 56.7
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 4.4e-98 362.1 303 57.1
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 5.7e-98 361.7 305 56.4
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 5.7e-98 361.7 305 55.1
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 9.7e-98 360.9 306 56.2
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 1.3e-97 360.5 310 55.5
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 1.7e-97 360.1 305 53.8
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 2.2e-97 359.8 307 56.4
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 2.2e-97 359.8 307 56.4
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 2.2e-97 359.8 307 56.4
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 3.7e-97 359.0 305 56.1
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 3.7e-97 359.0 305 56.4
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 3.7e-97 359.0 305 56.7
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 4.8e-97 358.6 307 58.0
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 8.2e-97 357.8 305 54.8
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 1.4e-96 357.1 305 55.7
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 1.8e-96 356.7 305 56.4
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 2.4e-96 356.3 303 55.4
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 3.1e-96 355.9 309 54.7
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 3.1e-96 355.9 301 55.8
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 3.1e-96 355.9 305 57.0
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 2.0e-95 353.2 305 54.8
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 1.7e-94 350.1 303 54.5
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 2.2e-94 349.7 254 63.4
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 1.5e-93 347.1 260 61.5
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 1.9e-93 346.7 304 54.6
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 2.5e-93 346.3 301 53.2
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 3.2e-93 345.9 304 53.6
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 3.2e-93 345.9 301 54.2
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 1.6e-92 343.6 306 54.2
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 3.0e-91 339.3 302 54.3
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 5.2e-91 338.6 301 53.5
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 5.7e-90 335.1 268 59.0
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 7.5e-90 334.7 301 52.8
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 1.3e-89 334.0 304 54.9
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 4.8e-89 332.0 309 51.8
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 8.3e-89 331.3 305 52.8
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.1e-88 330.9 309 51.8
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 5.4e-88 328.6 307 54.1
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 5.9e-87 325.1 306 54.2
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 1.0e-86 324.3 276 58.0
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 1.3e-86 323.9 266 58.6
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 2.9e-86 322.8 298 54.0
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 1.1e-85 320.9 310 51.3
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 7.2e-85 318.2 299 53.8
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 6.1e-84 315.1 300 53.3
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 8.0e-84 314.7 299 52.2
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 8.0e-84 314.7 298 52.7
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 8.0e-84 314.7 250 57.2
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 3.0e-83 312.8 298 53.4
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 5.7e-82 308.5 299 52.2
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 1.3e-81 307.4 305 52.1
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 6.3e-81 305.1 297 52.2
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 3.1e-80 302.8 251 57.4
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 1.3e-78 297.4 299 50.5
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 3.8e-78 295.8 240 56.7
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 6.6e-78 295.0 298 50.3
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 2.5e-77 293.1 298 49.7
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 2.1e-76 290.0 240 56.7
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 1.4e-75 287.3 304 47.4
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 4.0e-75 285.8 236 54.2
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 1.1e-72 277.7 307 47.9
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 1.8e-72 276.9 236 54.7
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 3.2e-72 276.2 301 47.5
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 1.6e-71 273.9 321 42.1
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.7e-71 273.1 305 43.9
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 8.6e-70 268.1 305 45.6
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 1.5e-69 267.3 307 43.0
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 1.9e-69 266.9 302 44.4
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 1.4e-67 260.8 303 44.2
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 3.4e-66 256.1 307 42.7
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 1.3e-65 254.2 236 48.3
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 2.9e-65 253.1 312 44.9
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 8.9e-59 231.5 310 41.0
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 5.8e-58 228.8 302 38.1
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 2.4e-56 223.4 303 39.9
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.7e-54 217.2 297 39.1
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 1.1e-53 214.5 263 43.7
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 8.1e-52 208.4 298 35.6
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 4.0e-51 206.1 304 37.2
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 3.0e-46 189.9 300 35.0
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 2.5e-45 186.8 300 35.7
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 1.6e-44 184.1 156 57.7
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 1.3e-36 157.9 149 55.0
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 4.9e-25 119.4 337 27.3
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 1.2e-23 114.8 153 42.5
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 4.8e-20 102.8 112 42.0
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 4.0e-19 99.8 121 43.0
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 1.3e-17 94.7 82 47.6
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 4.2e-16 89.7 79 44.3
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 5.1e-14 82.8 98 38.8
ATR0555G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.0e-09 68.6 67 41.8


User provided reference genes

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