Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0060 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 1.5e-228 795.8 391 100.0
CDE04G0725 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 1.2e-172 610.1 317 92.7
CSS0026926 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 2.4e-117 426.4 318 63.2
CSS0030688 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 1.2e-116 424.1 318 62.9
FAN11G1342 Fragaria x ananassa HOM05D006754 ORTHO05D008403 1.5e-111 407.1 314 61.1
FvH4_3g36800 Fragaria vesca HOM05D006754 ORTHO05D008403 4.3e-111 405.6 313 61.0
Atru.chr3.3972 Acer truncatum HOM05D006754 ORTHO05D008403 8.1e-110 401.4 307 61.2
Nn8g38772 Nelumbo nucifera HOM05D006754 ORTHO05D008403 1.8e-109 400.2 312 62.2
Sabra16G0147200 Salix brachista HOM05D006754 ORTHO05D008403 6.9e-109 398.3 312 59.9
Nitab4.5_0007132g0020 Nicotiana tabacum HOM05D006754 ORTHO05D008403 2.0e-108 396.7 282 64.5
TWI79G1092 Tripterygium wilfordii HOM05D006754 ORTHO05D008403 3.4e-108 396.0 316 58.9
Ciclev10030407m.g Citrus clementina HOM05D006754 ORTHO05D008403 1.7e-107 393.7 307 61.2
FAN25G2379 Fragaria x ananassa HOM05D006754 ORTHO05D008403 2.9e-107 392.9 312 59.9
Potri.001G242400 Populus trichocarpa HOM05D006754 ORTHO05D008403 3.8e-107 392.5 312 59.0
Potri.009G033700 Populus trichocarpa HOM05D006754 ORTHO05D008403 3.8e-107 392.5 310 58.7
MD03G1088200 Malus domestica HOM05D006754 ORTHO05D008403 8.4e-107 391.3 321 60.1
QL01p030969 Quercus lobata HOM05D006754 ORTHO05D008403 8.4e-107 391.3 314 60.2
MSTRG.21206 Avicennia marina HOM05D006754 ORTHO05D008403 1.1e-106 391.0 297 61.6
Hma1.2p1_0615F.1_g189790 Hydrangea macrophylla HOM05D006754 ORTHO05D008403 1.9e-106 390.2 316 59.2
PGSC0003DMG400030707 Solanum tuberosum HOM05D006754 ORTHO05D008403 1.9e-106 390.2 282 63.1
RcHm_v2.0_Chr5g0065861 Rosa chinensis HOM05D006754 ORTHO05D008403 7.1e-106 388.3 316 59.5
FAN16G0425 Fragaria x ananassa HOM05D006754 ORTHO05D008403 9.3e-106 387.9 316 58.9
Nitab4.5_0000272g0070 Nicotiana tabacum HOM05D006754 ORTHO05D008403 9.3e-106 387.9 264 66.7
Lj2P1066T40 Lonicera japonica HOM05D006754 ORTHO05D008403 1.6e-105 387.1 314 58.9
Prupe.6G072500 Prunus persica HOM05D006754 ORTHO05D008403 1.6e-105 387.1 302 61.6
Solyc07g007700.3 Solanum lycopersicum HOM05D006754 ORTHO05D008403 2.1e-105 386.7 314 58.0
Sopen07g003690 Solanum pennellii HOM05D006754 ORTHO05D008403 2.7e-105 386.3 314 57.6
Cpa.g.sc81.116 Carica papaya HOM05D006754 ORTHO05D008403 6.0e-105 385.2 321 58.3
COL.COLO4_18549 Corchorus olitorius HOM05D006754 ORTHO05D008403 1.0e-104 384.4 316 59.2
CAN.G969.5 Capsicum annuum HOM05D006754 ORTHO05D008403 1.3e-104 384.0 310 58.4
CiPaw.14G067200 Carya illinoinensis HOM05D006754 ORTHO05D008403 1.8e-104 383.6 314 59.6
ATR0752G045 Amborella trichopoda HOM05D006754 ORTHO05D008403 5.1e-104 382.1 313 58.8
Thecc.09G318400 Theobroma cacao HOM05D006754 ORTHO05D008403 5.1e-104 382.1 314 58.9
AT5G59500 Arabidopsis thaliana HOM05D006754 ORTHO05D008403 8.7e-104 381.3 318 58.2
Lsat_1_v5_gn_8_73421 Lactuca sativa HOM05D006754 ORTHO05D008403 8.2e-102 374.8 314 58.0
PGR102G0280 Punica granatum HOM05D006754 ORTHO05D008403 1.4e-101 374.0 318 56.3
AL8G35980 Arabidopsis lyrata HOM05D006754 ORTHO05D008403 1.8e-101 373.6 320 57.8
EL10Ac7g16047 Beta vulgaris HOM05D006754 ORTHO05D008403 2.4e-101 373.2 297 57.6
Carub.0008s2018 Capsella rubella HOM05D006754 ORTHO05D008403 2.4e-101 373.2 316 57.3
DCAR_005953 Daucus carota HOM05D006754 ORTHO05D008403 4.1e-101 372.5 316 56.3
Aqoxy2G02260 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 6.9e-101 371.7 316 57.0
Migut.F00608 Erythranthe guttata HOM05D006754 ORTHO05D008403 9.0e-101 371.3 297 58.9
Gorai.009G097800 Gossypium raimondii HOM05D006754 ORTHO05D008403 9.0e-101 371.3 308 57.5
Sc12g0001320 Simmondsia chinensis HOM05D006754 ORTHO05D008403 1.2e-100 370.9 316 54.7
Thhalv10015639m.g Eutrema salsugineum HOM05D006754 ORTHO05D008403 2.0e-100 370.2 320 56.2
Sp6g21200 Schrenkiella parvula HOM05D006754 ORTHO05D008403 2.0e-100 370.2 316 56.3
Oeu026710.1 Olea europaea HOM05D006754 ORTHO05D008403 2.6e-100 369.8 316 57.3
Cc01_g13150 Coffea canephora HOM05D006754 ORTHO05D008403 3.4e-100 369.4 311 56.9
CsaV3_1G034490 Cucumis sativus L. HOM05D006754 ORTHO05D008403 5.9e-100 368.6 314 58.3
Eucgr.B02322 Eucalyptus grandis HOM05D006754 ORTHO05D008403 7.6e-100 368.2 316 55.4
HanXRQChr05g0135011 Helianthus annuus HOM05D006754 ORTHO05D008403 1.0e-99 367.9 309 58.3
Haze_24130 Corylus avellana HOM05D006754 ORTHO05D008403 1.3e-99 367.5 316 57.6
MBI14_g12133_MAGBIO Magnolia biondii HOM05D006754 ORTHO05D008403 1.3e-99 367.5 312 58.0
ClCG03G001330 Citrullus lanatus HOM05D006754 ORTHO05D008403 1.7e-99 367.1 302 60.9
Medtr8g044030 Medicago truncatula HOM05D006754 ORTHO05D008403 1.7e-99 367.1 283 61.8
CARHR285870 Cardamine hirsuta HOM05D006754 ORTHO05D008403 2.2e-99 366.7 316 55.4
Gohir.A05G094100 Gossypium hirsutum HOM05D006754 ORTHO05D008403 3.8e-99 365.9 308 57.1
Sed0002230 Sechium edule HOM05D006754 ORTHO05D008403 3.8e-99 365.9 308 57.5
Manes.01G171100 Manihot esculenta HOM05D006754 ORTHO05D008403 5.0e-99 365.5 312 56.4
THA.LOC104799439 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 5.0e-99 365.5 316 55.7
Lj3g0006516 Lotus japonicus HOM05D006754 ORTHO05D008403 1.2e-97 360.9 316 55.4
Glyma.08G227600 Glycine max HOM05D006754 ORTHO05D008403 2.1e-97 360.1 316 55.4
PSO339G3555 Papaver somniferum HOM05D006754 ORTHO05D008403 2.1e-97 360.1 283 60.8
SalBow7G4834 Salvia bowleyana HOM05D006754 ORTHO05D008403 6.1e-97 358.6 283 60.8
THA.LOC104814881 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 7.9e-97 358.2 320 54.4
SalBow7G2225 Salvia bowleyana HOM05D006754 ORTHO05D008403 1.3e-96 357.5 283 60.4
BraA10t43752Z Brassica rapa HOM05D006754 ORTHO05D008403 3.9e-96 355.9 311 56.3
Ah.15g097770 Amaranthus hybridus HOM05D006754 ORTHO05D008403 5.1e-96 355.5 297 56.2
Duzib168G0850 Durio zibethinus HOM05D006754 ORTHO05D008403 5.1e-96 355.5 248 65.3
Aa31LG1G11840 Aethionema arabicum HOM05D006754 ORTHO05D008403 8.7e-96 354.8 316 55.1
PSO063G1099 Papaver somniferum HOM05D006754 ORTHO05D008403 1.1e-95 354.4 337 52.8
BcaC04g19764 Brassica carinata HOM05D006754 ORTHO05D008403 3.3e-95 352.8 311 55.6
C09p51900 Brassica napus HOM05D006754 ORTHO05D008403 3.3e-95 352.8 311 55.6
BolC9t58053H Brassica oleracea HOM05D006754 ORTHO05D008403 3.3e-95 352.8 311 55.6
Glyma.15G221700 Glycine max HOM05D006754 ORTHO05D008403 5.7e-95 352.1 316 54.4
A10p16710 Brassica napus HOM05D006754 ORTHO05D008403 7.4e-95 351.7 311 55.9
VMungo1127G1194 Vigna mungo HOM05D006754 ORTHO05D008403 9.7e-95 351.3 327 54.7
BcaB08g36252 Brassica carinata HOM05D006754 ORTHO05D008403 1.3e-94 350.9 316 55.7
Psat4g178480 Pisum sativum HOM05D006754 ORTHO05D008403 1.3e-94 350.9 312 55.4
arahy.Tifrunner.gnm1.ann1.826T7K Arachis hypogaea HOM05D006754 ORTHO05D008403 2.2e-94 350.1 316 54.1
FAN21G1313 Fragaria x ananassa HOM05D006754 ORTHO05D008403 6.3e-94 348.6 363 49.6
unitig_37.g12673 Utricularia gibba HOM05D006754 ORTHO05D008403 6.3e-94 348.6 283 58.0
Dinv22095 Davidia involucrata HOM05D006754 ORTHO05D008403 1.4e-93 347.4 243 65.0
Ca_24122_v3 Cicer arietinum L. HOM05D006754 ORTHO05D008403 1.8e-93 347.1 316 53.8
CANSAT56G3630 Cannabis sativa HOM05D006754 ORTHO05D008403 3.1e-93 346.3 307 57.7
Peaxi162Scf00122g00144 Petunia axillaris HOM05D006754 ORTHO05D008403 5.3e-93 345.5 301 54.5
SGA_v2.0_scaffold51G18718 Striga asiatica HOM05D006754 ORTHO05D008403 6.9e-93 345.1 281 58.4
AUR62001757 Chenopodium quinoa HOM05D006754 ORTHO05D008403 1.5e-92 344.0 283 57.6
Phvul.011G187300 Phaseolus vulgaris HOM05D006754 ORTHO05D008403 1.9e-90 337.0 327 52.6
AUR62009543 Chenopodium quinoa HOM05D006754 ORTHO05D008403 2.5e-90 336.7 297 55.2
Sed0016816 Sechium edule HOM05D006754 ORTHO05D008403 7.2e-82 308.5 283 53.4
Dinv09390 Davidia involucrata HOM05D006754 ORTHO05D008403 6.7e-80 302.0 208 66.3
Gohir.D05G094600 Gossypium hirsutum HOM05D006754 ORTHO05D008403 5.9e-76 288.9 242 55.8
Oeu004165.1 Olea europaea HOM05D006754 ORTHO05D008403 5.0e-75 285.8 243 55.6
Lalb_Chr01g0007611 Lupinus albus HOM05D006754 ORTHO05D008403 1.9e-66 257.3 316 44.6
ECA236G3563 Erigeron canadensis HOM05D006754 ORTHO05D008403 1.0e-56 224.9 150 70.7
Pp3c1_41830 Physcomitrium patens HOM05D006754 ORTHO05D008403 2.8e-54 216.9 287 39.7
GSVIVG01024926001 Vitis vinifera HOM05D006754 ORTHO05D008403 6.6e-51 205.7 316 38.0
Mapoly0044s0017 Marchantia polymorpha HOM05D006754 ORTHO05D008403 1.3e-46 191.4 286 35.7
SMO356G0015 Selaginella moellendorffii HOM05D006754 ORTHO05D008403 1.2e-44 184.9 263 38.8
TPR.G35751 Trifolium pratense HOM05D006754 ORTHO05D008403 1.6e-44 184.5 316 36.1
AagrBONN_evm.TU.Sc2ySwM_368.2585 Anthoceros agrestis HOM05D006754 ORTHO05D008403 1.0e-43 181.8 317 34.1
HPP92_027965 Vanilla planifolia HOM05D006754 ORTHO05D008403 1.7e-43 181.0 200 46.5
C03p13670 Brassica napus HOM05D006754 ORTHO05D008403 2.8e-41 173.7 124 64.5
BolC3t13816H Brassica oleracea HOM05D006754 ORTHO05D008403 2.8e-41 173.7 124 64.5
Nn4g26458 Nelumbo nucifera HOM05D006754 ORTHO05D008403 1.2e-39 168.3 117 65.0
MD11G1097300 Malus domestica HOM05D006754 ORTHO05D008403 2.9e-30 137.1 139 53.2
BcaB05g22514 Brassica carinata HOM05D006754 ORTHO05D008403 4.9e-30 136.3 165 45.5
Aqoxy2G02265 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 4.1e-29 133.3 135 50.4
HPP92_001678 Vanilla planifolia HOM05D006754 ORTHO05D008403 2.1e-28 131.0 145 48.3
Dinv06263 Davidia involucrata HOM05D006754 ORTHO05D008403 5.1e-27 126.3 95 66.3
CBR_g46210 Chara braunii HOM05D006754 ORTHO05D008403 5.2e-24 116.3 302 30.1
SEGI_33641 Sequoiadendron giganteum HOM05D006754 ORTHO05D008403 7.8e-20 102.4 205 32.2
Cre01.g049750 Chlamydomonas reinhardtii HOM05D006754 ORTHO05D008403 8.7e-11 72.4 213 30.5
BcaC03g14007 Brassica carinata HOM05D006754 ORTHO05D008403 2.8e-09 67.4 94 45.7
C02p12450 Brassica napus HOM05D006754 ORTHO05D008403 3.6e-09 67.0 92 46.7


User provided reference genes

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