Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE07G0055 Ceratophyllum demersum HOM05D004530 ORTHO05D005839 1.7e-85 319.3 159 100.0
CDE06G0463 Ceratophyllum demersum HOM05D004530 ORTHO05D005839 7.5e-54 214.2 212 59.4
CDE06G1928 Ceratophyllum demersum HOM05D004530 ORTHO05D005839 2.3e-39 166.0 178 54.5
Nn6g33827 Nelumbo nucifera HOM05D004530 ORTHO05D005839 6.6e-34 147.9 133 57.9
ATR0057G115 Amborella trichopoda HOM05D004530 ORTHO05D005839 3.3e-33 145.6 89 76.4
Ah.05g173100 Amaranthus hybridus HOM05D004530 ORTHO05D005839 9.5e-33 144.1 90 73.3
HPP92_022509 Vanilla planifolia HOM05D004530 ORTHO05D005839 9.5e-33 144.1 90 73.3
CiPaw.13G026100 Carya illinoinensis HOM05D004530 ORTHO05D005839 1.6e-32 143.3 90 72.2
Ciclev10019258m.g Citrus clementina HOM05D004530 ORTHO05D005839 2.8e-32 142.5 104 64.4
PSO732G0778 Papaver somniferum HOM05D004530 ORTHO05D005839 2.8e-32 142.5 104 65.4
Ah.05g174030 Amaranthus hybridus HOM05D004530 ORTHO05D005839 4.7e-32 141.7 90 72.2
Sc26g0001580 Simmondsia chinensis HOM05D004530 ORTHO05D005839 4.7e-32 141.7 104 64.4
PGR042G2176 Punica granatum HOM05D004530 ORTHO05D005839 6.2e-32 141.4 89 70.8
FvH4_7g10200 Fragaria vesca HOM05D004530 ORTHO05D005839 8.1e-32 141.0 89 73.0
FAN01G0552 Fragaria x ananassa HOM05D004530 ORTHO05D005839 8.1e-32 141.0 89 73.0
FAN06G5079 Fragaria x ananassa HOM05D004530 ORTHO05D005839 8.1e-32 141.0 89 73.0
FAN10G1666 Fragaria x ananassa HOM05D004530 ORTHO05D005839 8.1e-32 141.0 89 73.0
FAN10G4098 Fragaria x ananassa HOM05D004530 ORTHO05D005839 8.1e-32 141.0 89 73.0
TAR629G3313 Trochodendron aralioides HOM05D004530 ORTHO05D005839 8.1e-32 141.0 90 72.2
PSO675G1201 Papaver somniferum HOM05D004530 ORTHO05D005839 1.1e-31 140.6 104 64.4
MBI04_g41763_MAGBIO Magnolia biondii HOM05D004530 ORTHO05D005839 1.4e-31 140.2 91 72.5
TAR375G0493 Trochodendron aralioides HOM05D004530 ORTHO05D005839 1.4e-31 140.2 90 73.3
CsaV3_3G007220 Cucumis sativus L. HOM05D004530 ORTHO05D005839 2.3e-31 139.4 89 71.9
FAN03G1354 Fragaria x ananassa HOM05D004530 ORTHO05D005839 2.3e-31 139.4 89 71.9
FAN06G2217 Fragaria x ananassa HOM05D004530 ORTHO05D005839 2.3e-31 139.4 89 71.9
AUR62013743 Chenopodium quinoa HOM05D004530 ORTHO05D005839 3.1e-31 139.0 90 72.2
AUR62023408 Chenopodium quinoa HOM05D004530 ORTHO05D005839 3.1e-31 139.0 90 72.2
AUR62043872 Chenopodium quinoa HOM05D004530 ORTHO05D005839 3.1e-31 139.0 90 72.2
CDE11G0737 Ceratophyllum demersum HOM05D004530 ORTHO05D005839 4.0e-31 138.7 90 71.1
Potri.014G047600 Populus trichocarpa HOM05D004530 ORTHO05D005839 4.0e-31 138.7 88 70.5
vmacro13497 Vaccinium macrocarpon HOM05D004530 ORTHO05D005839 5.2e-31 138.3 120 54.2
QL04p030285 Quercus lobata HOM05D004530 ORTHO05D005839 6.8e-31 137.9 89 71.9
Gohir.A08G138600 Gossypium hirsutum HOM05D004530 ORTHO05D005839 8.9e-31 137.5 89 68.5
Duzib138G0269 Durio zibethinus HOM05D004530 ORTHO05D005839 1.2e-30 137.1 107 60.7
Atru.chr5.126 Acer truncatum HOM05D004530 ORTHO05D005839 1.5e-30 136.7 104 59.6
TWI59G1339 Tripterygium wilfordii HOM05D004530 ORTHO05D005839 1.5e-30 136.7 83 75.9
Sed0010787 Sechium edule HOM05D004530 ORTHO05D005839 2.6e-30 136.0 84 73.8
AT1G02120 Arabidopsis thaliana HOM05D004530 ORTHO05D005839 3.4e-30 135.6 99 61.6
CARHR000210 Cardamine hirsuta HOM05D004530 ORTHO05D005839 3.4e-30 135.6 87 70.1
MELO3C005943.2 Cucumis melo HOM05D004530 ORTHO05D005839 3.4e-30 135.6 89 70.8
Manes.01G274600 Manihot esculenta HOM05D004530 ORTHO05D005839 3.4e-30 135.6 130 54.6
Nn1g00849 Nelumbo nucifera HOM05D004530 ORTHO05D005839 3.4e-30 135.6 134 54.5
C05p00080 Brassica napus HOM05D004530 ORTHO05D005839 4.4e-30 135.2 97 63.9
BolC5t28795H Brassica oleracea HOM05D004530 ORTHO05D005839 4.4e-30 135.2 97 63.9
Haze_02848 Corylus avellana HOM05D004530 ORTHO05D005839 4.4e-30 135.2 104 61.5
Gohir.D08G159900 Gossypium hirsutum HOM05D004530 ORTHO05D005839 4.4e-30 135.2 89 67.4
Gorai.004G166100 Gossypium raimondii HOM05D004530 ORTHO05D005839 4.4e-30 135.2 89 67.4
PSO832G0798 Papaver somniferum HOM05D004530 ORTHO05D005839 4.4e-30 135.2 104 62.5
RcHm_v2.0_Chr1g0347921 Rosa chinensis HOM05D004530 ORTHO05D005839 4.4e-30 135.2 89 70.8
Solyc01g090230.3 Solanum lycopersicum HOM05D004530 ORTHO05D005839 4.4e-30 135.2 93 65.6
Sopen01g036030 Solanum pennellii HOM05D004530 ORTHO05D005839 4.4e-30 135.2 93 65.6
Zm00001eb105340 Zea mays HOM05D004530 ORTHO05D005839 4.4e-30 135.2 90 68.9
BcaB03g13633 Brassica carinata HOM05D004530 ORTHO05D005839 5.8e-30 134.8 97 63.9
CAN.G1473.6 Capsicum annuum HOM05D004530 ORTHO05D005839 5.8e-30 134.8 105 61.9
Zm00001eb321770 Zea mays HOM05D004530 ORTHO05D005839 5.8e-30 134.8 90 68.9
Aqoxy7G00763 Aquilegia oxysepala HOM05D004530 ORTHO05D005839 7.6e-30 134.4 84 75.0
Eucgr.E01549 Eucalyptus grandis HOM05D004530 ORTHO05D005839 7.6e-30 134.4 84 71.4
Potri.002G137800 Populus trichocarpa HOM05D004530 ORTHO05D005839 7.6e-30 134.4 120 54.2
COL.COLO4_12407 Corchorus olitorius HOM05D004530 ORTHO05D005839 9.9e-30 134.0 89 68.5
Thhalv10007106m.g Eutrema salsugineum HOM05D004530 ORTHO05D005839 9.9e-30 134.0 89 68.5
MD02G1212800 Malus domestica HOM05D004530 ORTHO05D005839 9.9e-30 134.0 89 69.7
EL10Ac1g00762 Beta vulgaris HOM05D004530 ORTHO05D005839 1.3e-29 133.7 87 70.1
A10p00110 Brassica napus HOM05D004530 ORTHO05D005839 1.3e-29 133.7 97 62.9
Carub.0001s0010 Capsella rubella HOM05D004530 ORTHO05D005839 1.3e-29 133.7 89 67.4
BraA10t42289Z Brassica rapa HOM05D004530 ORTHO05D005839 1.7e-29 133.3 97 62.9
HanXRQChr03g0093061 Helianthus annuus HOM05D004530 ORTHO05D005839 2.2e-29 132.9 107 54.2
Thecc.01G394900 Theobroma cacao HOM05D004530 ORTHO05D005839 2.2e-29 132.9 89 67.4
VMungo0331G0336 Vigna mungo HOM05D004530 ORTHO05D005839 2.2e-29 132.9 89 68.5
MD07G1109200 Malus domestica HOM05D004530 ORTHO05D005839 2.9e-29 132.5 89 69.7
Prupe.2G131900 Prunus persica HOM05D004530 ORTHO05D005839 2.9e-29 132.5 89 69.7
Rhsim07G0036000 Rhododendron simsii HOM05D004530 ORTHO05D005839 2.9e-29 132.5 90 64.4
Hund27405 Selenicereus undatus HOM05D004530 ORTHO05D005839 2.9e-29 132.5 80 73.8
Mapoly0083s0023 Marchantia polymorpha HOM05D004530 ORTHO05D005839 3.7e-29 132.1 106 57.5
Medtr8g006895 Medicago truncatula HOM05D004530 ORTHO05D005839 3.7e-29 132.1 104 59.6
TWI14G0541 Tripterygium wilfordii HOM05D004530 ORTHO05D005839 3.7e-29 132.1 102 61.8
GSVIVG01018280001 Vitis vinifera HOM05D004530 ORTHO05D005839 3.7e-29 132.1 90 67.8
MSTRG.20690 Avicennia marina HOM05D004530 ORTHO05D005839 4.9e-29 131.7 90 62.2
AL1G10110 Arabidopsis lyrata HOM05D004530 ORTHO05D005839 6.4e-29 131.3 84 70.2
Sabra14G0034600 Salix brachista HOM05D004530 ORTHO05D005839 6.4e-29 131.3 88 67.0
Actinidia12143 Actinidia chinensis HOM05D004530 ORTHO05D005839 8.4e-29 131.0 90 62.2
Ca_25804_v3 Cicer arietinum L. HOM05D004530 ORTHO05D005839 8.4e-29 131.0 103 61.2
Cc02_g25120 Coffea canephora HOM05D004530 ORTHO05D005839 8.4e-29 131.0 99 62.6
Glyma.20G070800 Glycine max HOM05D004530 ORTHO05D005839 8.4e-29 131.0 89 66.3
Dinv44062 Davidia involucrata HOM05D004530 ORTHO05D005839 1.1e-28 130.6 90 64.4
Pp3c9_25660 Physcomitrium patens HOM05D004530 ORTHO05D005839 1.1e-28 130.6 90 64.4
Psat4g224840 Pisum sativum HOM05D004530 ORTHO05D005839 1.4e-28 130.2 116 56.0
Aa31LG1G11490 Aethionema arabicum HOM05D004530 ORTHO05D005839 1.9e-28 129.8 116 55.2
Lj3g0003084 Lotus japonicus HOM05D004530 ORTHO05D005839 1.9e-28 129.8 89 65.2
Lsat_1_v5_gn_3_126420 Lactuca sativa HOM05D004530 ORTHO05D005839 3.2e-28 129.0 107 55.1
Hma1.2p1_0041F.1_g025350 Hydrangea macrophylla HOM05D004530 ORTHO05D005839 4.1e-28 128.6 90 64.4
Nitab4.5_0000920g0020 Nicotiana tabacum HOM05D004530 ORTHO05D005839 4.1e-28 128.6 90 64.4
Duzib133G0606 Durio zibethinus HOM05D004530 ORTHO05D005839 5.4e-28 128.3 90 70.0
Glyma.10G120400 Glycine max HOM05D004530 ORTHO05D005839 5.4e-28 128.3 104 59.6
CiPaw.03G262200 Carya illinoinensis HOM05D004530 ORTHO05D005839 7.1e-28 127.9 83 68.7
SMO228G0106 Selaginella moellendorffii HOM05D004530 ORTHO05D005839 9.2e-28 127.5 112 56.2
TPR.G33134 Trifolium pratense HOM05D004530 ORTHO05D005839 1.2e-27 127.1 90 63.3
Lalb_Chr12g0210571 Lupinus albus HOM05D004530 ORTHO05D005839 1.6e-27 126.7 89 62.9
AagrBONN_evm.TU.Sc2ySwM_117.1176 Anthoceros agrestis HOM05D004530 ORTHO05D005839 2.1e-27 126.3 90 63.3
Phvul.010G049900 Phaseolus vulgaris HOM05D004530 ORTHO05D005839 2.1e-27 126.3 89 65.2
Hund17085 Selenicereus undatus HOM05D004530 ORTHO05D005839 2.1e-27 126.3 115 56.5
Lalb_Chr07g0195421 Lupinus albus HOM05D004530 ORTHO05D005839 2.7e-27 125.9 87 64.4
ECA240G1126 Erigeron canadensis HOM05D004530 ORTHO05D005839 4.6e-27 125.2 107 53.3
THA.LOC104817000 Tarenaya hassleriana HOM05D004530 ORTHO05D005839 4.6e-27 125.2 89 65.2
Nitab4.5_0007027g0030 Nicotiana tabacum HOM05D004530 ORTHO05D005839 7.8e-27 124.4 97 60.8
Gorai.008G108800 Gossypium raimondii HOM05D004530 ORTHO05D005839 1.3e-26 123.6 86 65.1
Gohir.D12G099900 Gossypium hirsutum HOM05D004530 ORTHO05D005839 1.7e-26 123.2 86 65.1
Gohir.D08G067550 Gossypium hirsutum HOM05D004530 ORTHO05D005839 6.6e-26 121.3 89 65.2
Gorai.004G070300 Gossypium raimondii HOM05D004530 ORTHO05D005839 1.9e-25 119.8 89 65.2
CBR_g3459 Chara braunii HOM05D004530 ORTHO05D000353 1.2e-24 117.1 133 45.9
arahy.Tifrunner.gnm1.ann1.BH8PB4 Arachis hypogaea HOM05D004530 ORTHO05D005839 1.6e-24 116.7 111 52.3
arahy.Tifrunner.gnm1.ann1.WR8IC8 Arachis hypogaea HOM05D004530 ORTHO05D005839 1.6e-24 116.7 111 52.3
SalBow5G0820 Salvia bowleyana HOM05D004530 ORTHO05D005839 3.4e-22 109.0 113 46.9
Gohir.A08G058400 Gossypium hirsutum HOM05D004530 ORTHO05D005839 1.4e-20 103.6 89 60.7
Cpa.g.sc22.81 Carica papaya HOM05D004530 ORTHO05D005839 1.3e-16 90.5 105 47.6
PRCOL_00001515 Prasinoderma coloniale HOM05D004530 ORTHO05D005839 1.3e-16 90.5 90 45.6
SEGI_20424 Sequoiadendron giganteum HOM05D004530 ORTHO05D005839 2.1e-16 89.7 84 51.2
MCO09G309 Micromonas commoda HOM05D004530 ORTHO05D005839 1.4e-15 87.0 90 44.4
DCAR_029469 Daucus carota HOM05D004530 ORTHO05D005839 2.4e-15 86.3 142 35.2
Cfa021660 Carpinus fangiana HOM05D000871 ORTHO05D000770 5.8e-14 81.6 82 48.8
ClCG05G000120 Citrullus lanatus HOM05D004530 ORTHO05D005839 7.6e-14 81.3 52 71.2
unitig_26.g9593 Utricularia gibba HOM05D004530 ORTHO05D005839 1.3e-13 80.5 98 42.9
Cre16.g664050 Chlamydomonas reinhardtii HOM05D004530 ORTHO05D005839 3.8e-13 79.0 79 45.6
PRCOL_00002228 Prasinoderma coloniale HOM05D004530 ORTHO05D005839 8.4e-13 77.8 109 38.5
Migut.B01535 Erythranthe guttata HOM05D004530 ORTHO05D005839 4.2e-12 75.5 61 50.8
Lj9A557G31 Lonicera japonica HOM05D004530 ORTHO05D005839 4.2e-12 75.5 59 55.9
SGA_v2.0_scaffold52G19226 Striga asiatica HOM05D004530 ORTHO05D005839 7.1e-12 74.7 101 40.6
CSS0020970 Camellia sinensis var. sinensis HOM05D004530 ORTHO05D005839 1.7e-10 70.1 75 46.7
CSS0024507 Camellia sinensis var. sinensis HOM05D004530 ORTHO05D005839 1.7e-10 70.1 75 46.7
TPR.G33115 Trifolium pratense HOM05D004530 ORTHO05D009811 3.9e-10 68.9 61 49.2
Gohir.A12G097000 Gossypium hirsutum HOM05D004530 ORTHO05D005839 1.9e-09 66.6 104 37.5
CSS0047129 Camellia sinensis var. sinensis HOM05D004530 ORTHO05D005839 2.6e-06 56.2 30 73.3
CSS0049288 Camellia sinensis var. sinensis HOM05D004530 ORTHO05D005839 2.6e-06 56.2 30 73.3
SEGI_01894 Sequoiadendron giganteum HOM05D004530 ORTHO05D005839 3.4e-06 55.8 57 49.1


User provided reference genes

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