Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2808 Ceratophyllum demersum HOM05D007228 ORTHO05D009099 1.3e-252 875.9 456 100.0
CDE02G2405 Ceratophyllum demersum HOM05D001480 ORTHO05D001331 1.1e-38 165.2 116 75.9
MBI11_g17279_MAGBIO Magnolia biondii HOM05D007228 ORTHO05D009099 3.3e-38 163.7 517 26.9
CDE02G0692 Ceratophyllum demersum HOM05D007228 ORTHO05D009099 2.2e-37 161.0 95 82.1
Aqoxy5G02968 Aquilegia oxysepala HOM05D007228 ORTHO05D009099 7.4e-30 136.0 514 25.3
Atru.chr6.1953 Acer truncatum HOM05D007228 ORTHO05D009099 9.7e-30 135.6 506 25.9
Sabra15G0131800 Salix brachista HOM05D007228 ORTHO05D009099 9.7e-30 135.6 493 25.6
QL10p000149 Quercus lobata HOM05D007228 ORTHO05D009099 1.6e-27 128.3 509 23.8
Potri.015G109700 Populus trichocarpa HOM05D007228 ORTHO05D009099 4.5e-27 126.7 507 25.4
Dinv13695 Davidia involucrata HOM05D007228 ORTHO05D009099 7.7e-27 125.9 512 24.6
TAR629G1179 Trochodendron aralioides HOM05D007228 ORTHO05D009099 7.7e-27 125.9 114 49.1
PSO478G4831 Papaver somniferum HOM05D007228 ORTHO05D009099 2.9e-26 124.0 113 52.2
Prupe.5G138400 Prunus persica HOM05D007228 ORTHO05D009099 2.9e-26 124.0 515 24.7
TWI39G0517 Tripterygium wilfordii HOM05D007228 ORTHO05D009099 2.9e-26 124.0 511 24.5
Ciclev10030919m.g Citrus clementina HOM05D007228 ORTHO05D009099 3.8e-26 123.6 511 23.9
Zm00001eb334150 Zea mays HOM05D007228 ORTHO05D009099 6.5e-26 122.9 177 37.3
PSO017G4664 Papaver somniferum HOM05D007228 ORTHO05D009099 1.9e-25 121.3 113 50.4
Lj4g0027006 Lotus japonicus HOM05D007228 ORTHO05D009099 4.2e-25 120.2 514 23.2
Peaxi162Scf00314g00833 Petunia axillaris HOM05D007228 ORTHO05D009099 1.2e-24 118.6 500 24.4
Hma1.2p1_0338F.1_g129520 Hydrangea macrophylla HOM05D007228 ORTHO05D009099 6.1e-24 116.3 511 25.0
Nn3g16198 Nelumbo nucifera HOM05D007228 ORTHO05D009099 6.1e-24 116.3 113 49.6
Thecc.03G143400 Theobroma cacao HOM05D007228 ORTHO05D009099 1.0e-23 115.5 114 43.9
Psat7g040280 Pisum sativum HOM05D007228 ORTHO05D009099 2.3e-23 114.4 478 23.4
vmacro19097 Vaccinium macrocarpon HOM05D007228 ORTHO05D009099 5.2e-23 113.2 114 45.6
GSVIVG01014990001 Vitis vinifera HOM05D007228 ORTHO05D009099 5.2e-23 113.2 508 22.6
Cfa018687 Carpinus fangiana HOM05D007228 ORTHO05D009099 2.0e-22 111.3 114 43.9
FAN04G0692 Fragaria x ananassa HOM05D007228 ORTHO05D009099 2.0e-22 111.3 114 43.9
Haze_07072 Corylus avellana HOM05D007228 ORTHO05D009099 3.3e-22 110.5 114 43.0
FvH4_5g10000 Fragaria vesca HOM05D007228 ORTHO05D009099 3.3e-22 110.5 162 34.6
Gohir.D12G197500 Gossypium hirsutum HOM05D007228 ORTHO05D009099 3.3e-22 110.5 155 36.1
Gorai.008G212000 Gossypium raimondii HOM05D007228 ORTHO05D009099 3.3e-22 110.5 155 36.1
AL6G17680 Arabidopsis lyrata HOM05D007228 ORTHO05D009099 4.4e-22 110.2 113 46.9
Gohir.A12G195100 Gossypium hirsutum HOM05D007228 ORTHO05D009099 4.4e-22 110.2 155 35.5
COL.COLO4_37286 Corchorus olitorius HOM05D007228 ORTHO05D009099 5.7e-22 109.8 114 40.4
Rhsim08G0200200 Rhododendron simsii HOM05D007228 ORTHO05D009099 5.7e-22 109.8 114 43.9
RcHm_v2.0_Chr7g0188261 Rosa chinensis HOM05D007228 ORTHO05D009099 5.7e-22 109.8 165 37.0
Glyma.08G006100 Glycine max HOM05D007228 ORTHO05D009099 7.5e-22 109.4 507 22.3
CSS0001938 Camellia sinensis var. sinensis HOM05D007228 ORTHO05D009099 9.7e-22 109.0 114 46.5
CSS0045118 Camellia sinensis var. sinensis HOM05D007228 ORTHO05D009099 9.7e-22 109.0 114 46.5
FAN08G0661 Fragaria x ananassa HOM05D007228 ORTHO05D009099 9.7e-22 109.0 114 42.1
FAN18G1110 Fragaria x ananassa HOM05D007228 ORTHO05D009099 9.7e-22 109.0 114 42.1
AT5G07380 Arabidopsis thaliana HOM05D007228 ORTHO05D009099 1.3e-21 108.6 113 46.9
VMungo0251G0919 Vigna mungo HOM05D007228 ORTHO05D009099 1.3e-21 108.6 509 25.0
Lsat_1_v5_gn_1_30460 Lactuca sativa HOM05D007228 ORTHO05D009099 1.7e-21 108.2 500 23.8
Ca_16830_v3 Cicer arietinum L. HOM05D007228 ORTHO05D009099 2.8e-21 107.5 512 21.9
arahy.Tifrunner.gnm1.ann1.E4K3LT Arachis hypogaea HOM05D007228 ORTHO05D009099 3.7e-21 107.1 515 22.3
arahy.Tifrunner.gnm1.ann1.RK1GDQ Arachis hypogaea HOM05D007228 ORTHO05D009099 4.8e-21 106.7 515 21.9
Nitab4.5_0000976g0280 Nicotiana tabacum HOM05D007228 ORTHO05D009099 6.3e-21 106.3 500 23.4
C09p69520 Brassica napus HOM05D007228 ORTHO05D009099 8.3e-21 105.9 113 43.4
BolC9t59696H Brassica oleracea HOM05D007228 ORTHO05D009099 8.3e-21 105.9 113 43.4
Manes.06G128600 Manihot esculenta HOM05D007228 ORTHO05D009099 8.3e-21 105.9 511 22.3
BraA10t44962Z Brassica rapa HOM05D007228 ORTHO05D009099 1.1e-20 105.5 113 43.4
Thhalv10012911m.g Eutrema salsugineum HOM05D007228 ORTHO05D009099 1.4e-20 105.1 173 36.4
Manes.14G042701 Manihot esculenta HOM05D007228 ORTHO05D009099 1.4e-20 105.1 178 32.6
THA.LOC104819419 Tarenaya hassleriana HOM05D007228 ORTHO05D009099 1.4e-20 105.1 112 43.8
BcaC06g32443 Brassica carinata HOM05D007228 ORTHO05D009099 1.8e-20 104.8 113 42.5
Duzib205G0703 Durio zibethinus HOM05D007228 ORTHO05D009099 1.8e-20 104.8 118 40.7
Os01g0103900 Oryza sativa ssp. japonica HOM05D007228 ORTHO05D009099 1.8e-20 104.8 115 43.5
TPR.G12794 Trifolium pratense HOM05D007228 ORTHO05D009099 1.8e-20 104.8 526 21.7
Medtr8g095540 Medicago truncatula HOM05D007228 ORTHO05D009099 3.1e-20 104.0 513 22.0
Phvul.002G279800 Phaseolus vulgaris HOM05D007228 ORTHO05D009099 4.1e-20 103.6 474 25.5
A10p29130 Brassica napus HOM05D007228 ORTHO05D009099 5.3e-20 103.2 113 43.4
CARHR205770 Cardamine hirsuta HOM05D007228 ORTHO05D009099 9.1e-20 102.4 154 37.0
Lalb_Chr12g0202641 Lupinus albus HOM05D007228 ORTHO05D009099 1.2e-19 102.1 114 40.4
Cpa.g.sc13.201 Carica papaya HOM05D007228 ORTHO05D009099 2.0e-19 101.3 520 23.5
MD06G1128600 Malus domestica HOM05D007228 ORTHO05D009099 3.5e-19 100.5 549 22.6
Solyc03g117990.1 Solanum lycopersicum HOM05D007228 ORTHO05D009099 3.5e-19 100.5 504 23.2
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 5.9e-19 99.8 167 36.5
CsaV3_5G013390 Cucumis sativus L. HOM05D007228 ORTHO05D009099 5.9e-19 99.8 144 34.0
Nitab4.5_0011883g0020 Nicotiana tabacum HOM05D007228 ORTHO05D009099 7.7e-19 99.4 499 22.8
CAN.G1008.38 Capsicum annuum HOM05D007228 ORTHO05D009099 1.0e-18 99.0 526 23.2
MELO3C018355.2 Cucumis melo HOM05D007228 ORTHO05D009099 1.3e-18 98.6 157 34.4
ECA247G3190 Erigeron canadensis HOM05D007228 ORTHO05D009099 1.3e-18 98.6 508 23.0
Sopen03g036890 Solanum pennellii HOM05D007228 ORTHO05D009099 1.3e-18 98.6 508 22.8
SalBow1G3473 Salvia bowleyana HOM05D007228 ORTHO05D009099 1.7e-18 98.2 503 22.7
Aa31LG3G18990 Aethionema arabicum HOM05D007228 ORTHO05D009099 2.2e-18 97.8 482 24.1
ClCG07G006120 Citrullus lanatus HOM05D007228 ORTHO05D009099 5.0e-18 96.7 110 40.9
Eucgr.E04338 Eucalyptus grandis HOM05D007228 ORTHO05D009099 5.0e-18 96.7 115 41.7
GSVIVG01035283001 Vitis vinifera HOM05D007228 ORTHO05D009099 5.0e-18 96.7 118 35.6
Actinidia18280 Actinidia chinensis HOM05D007228 ORTHO05D009099 1.1e-17 95.5 492 24.6
Carub.0006s0635 Capsella rubella HOM05D007228 ORTHO05D009099 2.5e-17 94.4 112 40.2
AUR62036968 Chenopodium quinoa HOM05D007228 ORTHO05D009099 2.5e-17 94.4 110 40.0
AUR62032199 Chenopodium quinoa HOM05D007228 ORTHO05D009099 3.2e-17 94.0 110 40.0
Sed0011749 Sechium edule HOM05D007228 ORTHO05D009099 5.5e-17 93.2 110 37.3
Sc04g0000080 Simmondsia chinensis HOM05D007228 ORTHO05D009099 1.2e-16 92.0 112 36.6
Sc04g0000120 Simmondsia chinensis HOM05D007228 ORTHO05D009099 1.2e-16 92.0 112 36.6
Migut.D01167 Erythranthe guttata HOM05D007228 ORTHO05D009099 1.6e-16 91.7 505 22.0
Hund02521 Selenicereus undatus HOM05D007228 ORTHO05D009099 1.6e-16 91.7 124 36.3
HanXRQChr08g0229031 Helianthus annuus HOM05D007228 ORTHO05D009099 8.0e-16 89.4 163 31.3
MSTRG.9383 Avicennia marina HOM05D007228 ORTHO05D009099 1.0e-15 89.0 120 45.0
Cc04_g05590 Coffea canephora HOM05D007228 ORTHO05D009099 4.0e-15 87.0 113 32.7
EL10Ac5g11261 Beta vulgaris HOM05D007228 ORTHO05D009099 8.8e-15 85.9 111 37.8
SEGI_11491 Sequoiadendron giganteum HOM05D007228 ORTHO05D009099 1.5e-14 85.1 118 35.6
Psat0s3642g0120 Pisum sativum HOM05D007228 ORTHO05D009099 2.0e-14 84.7 100 40.0
Psat3g128520 Pisum sativum HOM05D007228 ORTHO05D009099 4.4e-14 83.6 104 39.4
PGSC0003DMG400014227 Solanum tuberosum HOM05D007228 ORTHO05D009099 2.2e-13 81.3 126 42.1
HanXRQChr08g0229021 Helianthus annuus HOM05D007228 ORTHO05D009099 1.4e-12 78.6 125 41.6
Lj9C489T6 Lonicera japonica HOM05D007228 ORTHO05D009099 2.4e-12 77.8 126 41.3
SGA_v2.0_scaffold515G52653 Striga asiatica HOM05D007228 ORTHO05D009099 2.0e-11 74.7 500 23.8
Lalb_Chr12g0202661 Lupinus albus HOM05D007228 ORTHO05D009099 1.1e-09 68.9 129 38.0
PGR142G1350 Punica granatum HOM05D007228 ORTHO05D009099 3.6e-08 63.9 165 24.8
HPP92_021579 Vanilla planifolia HOM05D007228 ORTHO05D009099 1.8e-07 61.6 230 32.6
SMO119G0281 Selaginella moellendorffii HOM05D007228 ORTHO05D009099 2.3e-07 61.2 117 27.4
AL468U10020 Arabidopsis lyrata HOM05D007228 ORTHO05D009099 3.0e-07 60.8 85 38.8


User provided reference genes

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