Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2798 Ceratophyllum demersum HOM05D005065 ORTHO05D005944 4.1e-96 354.8 183 100.0
Sabra13G0095100 Salix brachista HOM05D005065 ORTHO05D005944 1.2e-15 87.4 173 42.2
Ca_10622_v3 Cicer arietinum L. HOM05D005065 ORTHO05D005944 2.7e-15 86.3 128 48.4
Peaxi162Scf00268g00105 Petunia axillaris HOM05D005065 ORTHO05D005944 8.7e-14 81.3 138 41.3
Nitab4.5_0009211g0010 Nicotiana tabacum HOM05D005065 ORTHO05D005944 7.4e-13 78.2 140 41.4
Potri.013G111700 Populus trichocarpa HOM05D005065 ORTHO05D005944 3.7e-12 75.9 93 50.5
Cfa013844 Carpinus fangiana HOM05D005065 ORTHO05D005944 4.8e-12 75.5 175 42.9
Dinv41716 Davidia involucrata HOM05D005065 ORTHO05D005944 6.3e-12 75.1 113 46.9
Peaxi162Scf01013g00001 Petunia axillaris HOM05D005065 ORTHO05D005944 6.3e-12 75.1 138 42.0
Carub.0001s2220 Capsella rubella HOM05D005065 ORTHO05D005944 8.2e-12 74.7 122 47.5
Nn5g27677 Nelumbo nucifera HOM05D005065 ORTHO05D005944 1.4e-11 73.9 112 43.8
Nitab4.5_0000277g0040 Nicotiana tabacum HOM05D005065 ORTHO05D005944 1.4e-11 73.9 163 38.7
Aqoxy5G02380 Aquilegia oxysepala HOM05D005065 ORTHO05D005944 1.8e-11 73.6 113 45.1
Dinv15081 Davidia involucrata HOM05D005065 ORTHO05D005944 1.8e-11 73.6 141 44.0
Duzib211G0507 Durio zibethinus HOM05D005065 ORTHO05D005944 1.8e-11 73.6 124 45.2
Glyma.10G217400 Glycine max HOM05D005065 ORTHO05D005944 1.8e-11 73.6 155 40.6
MSTRG.25443 Avicennia marina HOM05D005065 ORTHO05D005944 3.1e-11 72.8 142 41.5
Sabra19G0094300 Salix brachista HOM05D005065 ORTHO05D005944 3.1e-11 72.8 159 43.4
CiPaw.07G160300 Carya illinoinensis HOM05D005065 ORTHO05D005944 4.1e-11 72.4 172 39.5
Lalb_Chr01g0010191 Lupinus albus HOM05D005065 ORTHO05D005944 4.1e-11 72.4 136 45.6
Glyma.20G174600 Glycine max HOM05D005065 ORTHO05D005944 5.3e-11 72.0 100 45.0
Lalb_Chr21g0305721 Lupinus albus HOM05D005065 ORTHO05D005944 5.3e-11 72.0 142 41.5
VMungo0720G1099 Vigna mungo HOM05D005065 ORTHO05D005944 6.9e-11 71.6 152 40.1
Gorai.009G290400 Gossypium raimondii HOM05D005065 ORTHO05D005944 9.0e-11 71.2 135 43.0
Gohir.A05G275300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.2e-10 70.9 141 42.6
Gohir.D05G277400 Gossypium hirsutum HOM05D005065 ORTHO05D005944 2.0e-10 70.1 135 43.0
Lalb_Chr06g0162001 Lupinus albus HOM05D005065 ORTHO05D005944 2.0e-10 70.1 107 43.0
Hma1.2p1_0937F.1_g239030 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 2.6e-10 69.7 112 46.4
Thecc.08G184600 Theobroma cacao HOM05D005065 ORTHO05D005944 2.6e-10 69.7 103 48.5
Cpa.g.sc66.33 Carica papaya HOM05D005065 ORTHO05D005944 3.4e-10 69.3 125 44.0
DCAR_011533 Daucus carota HOM05D005065 ORTHO05D005944 3.4e-10 69.3 149 38.9
Phvul.007G088700 Phaseolus vulgaris HOM05D005065 ORTHO05D005944 3.4e-10 69.3 144 41.7
AL1G36220 Arabidopsis lyrata HOM05D005065 ORTHO05D005944 4.5e-10 68.9 114 49.1
Oeu029996.1 Olea europaea HOM05D005065 ORTHO05D005944 4.5e-10 68.9 177 39.0
CiPaw.08G058800 Carya illinoinensis HOM05D005065 ORTHO05D005944 5.9e-10 68.6 159 35.2
Nn1g08370 Nelumbo nucifera HOM05D005065 ORTHO05D005944 5.9e-10 68.6 184 38.0
Manes.18G101500 Manihot esculenta HOM05D005065 ORTHO05D005944 7.7e-10 68.2 147 38.8
Prupe.8G058900 Prunus persica HOM05D005065 ORTHO05D005944 1.0e-09 67.8 120 40.0
PGR042G0986 Punica granatum HOM05D005065 ORTHO05D005944 1.0e-09 67.8 99 44.4
Ciclev10002433m.g Citrus clementina HOM05D005065 ORTHO05D005944 1.3e-09 67.4 102 48.0
MSTRG.1526 Avicennia marina HOM05D005065 ORTHO05D005944 2.2e-09 66.6 124 43.5
Eucgr.F02608 Eucalyptus grandis HOM05D005065 ORTHO05D005944 3.8e-09 65.9 136 39.0
FvH4_2g11630 Fragaria vesca HOM05D005065 ORTHO05D005944 3.8e-09 65.9 121 39.7
FAN24G2022 Fragaria x ananassa HOM05D005065 ORTHO05D005944 3.8e-09 65.9 121 39.7
Haze_22517 Corylus avellana HOM05D005065 ORTHO05D005944 5.0e-09 65.5 183 39.3
Potri.019G082866 Populus trichocarpa HOM05D005065 ORTHO05D005944 5.0e-09 65.5 91 48.4
Rhsim06G0094100 Rhododendron simsii HOM05D005065 ORTHO05D005944 5.0e-09 65.5 114 42.1
Migut.C01259 Erythranthe guttata HOM05D005065 ORTHO05D005944 6.5e-09 65.1 121 44.6
FAN20G1873 Fragaria x ananassa HOM05D005065 ORTHO05D005944 6.5e-09 65.1 121 39.7
Lsat_1_v5_gn_6_109661 Lactuca sativa HOM05D005065 ORTHO05D005944 6.5e-09 65.1 118 38.1
Lalb_Chr02g0141751 Lupinus albus HOM05D005065 ORTHO05D005944 6.5e-09 65.1 86 47.7
Cc00_g13630 Coffea canephora HOM05D005065 ORTHO05D005944 8.5e-09 64.7 126 44.4
Oeu021210.1 Olea europaea HOM05D005065 ORTHO05D005944 1.4e-08 63.9 114 40.4
SalBow7G0321 Salvia bowleyana HOM05D005065 ORTHO05D005944 1.4e-08 63.9 90 47.8
Hma1.2p1_0060F.1_g032900 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 1.9e-08 63.5 126 42.1
MBI09_g14012_MAGBIO Magnolia biondii HOM05D005065 ORTHO05D005944 1.9e-08 63.5 112 41.1
AT1G22680 Arabidopsis thaliana HOM05D005065 ORTHO05D005944 2.5e-08 63.2 111 46.8
FAN15G3279 Fragaria x ananassa HOM05D005065 ORTHO05D005944 2.5e-08 63.2 121 38.8
Lsat_1_v5_gn_1_10621 Lactuca sativa HOM05D005065 ORTHO05D005944 3.2e-08 62.8 99 42.4
MD05G1042300 Malus domestica HOM05D005065 ORTHO05D005944 3.2e-08 62.8 95 45.3
Ah.05g178140 Amaranthus hybridus HOM05D005065 ORTHO05D005944 4.2e-08 62.4 129 45.7
Oeu025521.1 Olea europaea HOM05D005065 ORTHO05D005944 4.2e-08 62.4 117 38.5
PSO782G1863 Papaver somniferum HOM05D005065 ORTHO05D005944 4.2e-08 62.4 164 36.0
Sp1g20190 Schrenkiella parvula HOM05D005065 ORTHO05D005944 4.2e-08 62.4 113 42.5
TAR624G0039 Trochodendron aralioides HOM05D005065 ORTHO05D005944 4.2e-08 62.4 185 35.1
Gohir.A13G121100 Gossypium hirsutum HOM05D005065 ORTHO05D005944 5.5e-08 62.0 144 39.6
TPR.G8826 Trifolium pratense HOM05D005065 ORTHO05D005944 5.5e-08 62.0 161 37.9
Duzib177G1167 Durio zibethinus HOM05D005065 ORTHO05D005944 7.2e-08 61.6 150 39.3
CAN.G199.8 Capsicum annuum HOM05D005065 ORTHO05D005944 1.2e-07 60.8 144 34.7
TWI60G1480 Tripterygium wilfordii HOM05D005065 ORTHO05D005944 1.2e-07 60.8 90 41.1
Actinidia02576 Actinidia chinensis HOM05D005065 ORTHO05D005944 1.6e-07 60.5 131 40.5
ATR0003G028 Amborella trichopoda HOM05D005065 ORTHO05D005944 1.6e-07 60.5 142 36.6
Thhalv10019856m.g Eutrema salsugineum HOM05D005065 ORTHO05D005944 1.6e-07 60.5 93 46.2
CARHR023050 Cardamine hirsuta HOM05D005065 ORTHO05D005944 2.1e-07 60.1 135 39.3
Psat6g187880 Pisum sativum HOM05D005065 ORTHO05D005944 2.1e-07 60.1 167 34.1
Sp5g27040 Schrenkiella parvula HOM05D005065 ORTHO05D005944 2.1e-07 60.1 99 45.5
PGSC0003DMG400026113 Solanum tuberosum HOM05D005065 ORTHO05D005944 2.1e-07 60.1 135 40.7
Solyc11g018710.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 2.7e-07 59.7 109 39.4
MSTRG.22454 Avicennia marina HOM05D005065 ORTHO05D005944 3.6e-07 59.3 121 38.8
EL10Ac1g00090 Beta vulgaris HOM05D005065 ORTHO05D005944 3.6e-07 59.3 96 44.8
RcHm_v2.0_Chr6g0270871 Rosa chinensis HOM05D005065 ORTHO05D005944 3.6e-07 59.3 157 33.1
Solyc06g065340.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 3.6e-07 59.3 147 36.1
Sopen11g009740 Solanum pennellii HOM05D005065 ORTHO05D005944 3.6e-07 59.3 113 38.9
PGSC0003DMG400014033 Solanum tuberosum HOM05D005065 ORTHO05D005944 4.6e-07 58.9 113 38.9
CSS0016137 Camellia sinensis var. sinensis HOM05D005065 ORTHO05D005944 6.1e-07 58.5 134 43.3
Actinidia23336 Actinidia chinensis HOM05D005065 ORTHO05D005944 7.9e-07 58.2 111 39.6
Aa31LG4G8650 Aethionema arabicum HOM05D005065 ORTHO05D005944 7.9e-07 58.2 94 45.7
Lalb_Chr03g0036131 Lupinus albus HOM05D005065 ORTHO05D005944 7.9e-07 58.2 132 40.2
Rhsim11G0058400 Rhododendron simsii HOM05D005065 ORTHO05D005944 7.9e-07 58.2 120 35.0
A07p38140 Brassica napus HOM05D005065 ORTHO05D005944 1.0e-06 57.8 100 46.0
Gohir.D13G125200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.0e-06 57.8 118 41.5
Gorai.013G140100 Gossypium raimondii HOM05D005065 ORTHO05D005944 1.0e-06 57.8 118 41.5
HPP92_006868 Vanilla planifolia HOM05D064031 ORTHO05D005944 1.0e-06 57.8 106 39.6
HanXRQChr04g0107491 Helianthus annuus HOM05D005065 ORTHO05D005944 1.4e-06 57.4 121 43.0
SGA_v2.0_scaffold149G36582 Striga asiatica HOM05D005065 ORTHO05D005944 1.4e-06 57.4 129 39.5
Atru.chr13.1737 Acer truncatum HOM05D005065 ORTHO05D005944 1.8e-06 57.0 99 46.5
HPP92_009270 Vanilla planifolia HOM05D005065 ORTHO05D005944 2.3e-06 56.6 125 40.0
ATR0820G021 Amborella trichopoda HOM05D005065 ORTHO05D005944 3.0e-06 56.2 143 33.6
BcaB03g15639 Brassica carinata HOM05D005065 ORTHO05D005944 3.0e-06 56.2 123 41.5
Eucgr.F04121 Eucalyptus grandis HOM05D005065 ORTHO05D005944 3.9e-06 55.8 99 41.4
Sopen06g023830 Solanum pennellii HOM05D005065 ORTHO05D005944 3.9e-06 55.8 162 34.0
BcaB05g24697 Brassica carinata HOM05D005065 ORTHO05D005944 5.1e-06 55.5 159 35.8
A07p30470 Brassica napus HOM05D005065 ORTHO05D005944 5.1e-06 55.5 146 38.4
BraA07t30683Z Brassica rapa HOM05D005065 ORTHO05D005944 5.1e-06 55.5 146 38.4
BraA07t31379Z Brassica rapa HOM05D005065 ORTHO05D005944 5.1e-06 55.5 129 41.1
Rhsim11G0058500 Rhododendron simsii HOM05D005065 ORTHO05D005944 5.1e-06 55.5 110 36.4
BcaB03g14918 Brassica carinata HOM05D005065 ORTHO05D005944 6.7e-06 55.1 129 40.3
C06p46070 Brassica napus HOM05D005065 ORTHO05D005944 6.7e-06 55.1 100 45.0
HPP92_006851 Vanilla planifolia HOM05D064031 ORTHO05D005944 6.7e-06 55.1 107 39.3
SGA_v2.0_scaffold24G10554 Striga asiatica HOM05D005065 ORTHO05D005944 8.8e-06 54.7 116 38.8


User provided reference genes

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