Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2796 Ceratophyllum demersum HOM05D002903 ORTHO05D003066 3.1e-142 508.4 254 100.0
CDE08G0104 Ceratophyllum demersum HOM05D002903 ORTHO05D003066 1.0e-92 344.0 226 81.0
Glyma.13G036100 Glycine max HOM05D002903 ORTHO05D003066 6.9e-17 92.0 247 31.2
MBI06_g27454_MAGBIO Magnolia biondii HOM05D002903 ORTHO05D003066 1.5e-16 90.9 207 30.9
Glyma.14G158800 Glycine max HOM05D002903 ORTHO05D003066 4.5e-16 89.4 216 29.2
Lalb_Chr10g0101441 Lupinus albus HOM05D002903 ORTHO05D003066 7.6e-16 88.6 213 31.9
TAR376G0422 Trochodendron aralioides HOM05D002903 ORTHO05D003066 1.7e-15 87.4 217 33.6
CiPaw.16G019600 Carya illinoinensis HOM05D002903 ORTHO05D003066 3.8e-15 86.3 185 33.5
ClCG08G006250 Citrullus lanatus HOM05D002903 ORTHO05D003066 8.4e-15 85.1 186 35.5
TAR625G1102 Trochodendron aralioides HOM05D002903 ORTHO05D003066 1.9e-14 84.0 213 31.9
MELO3C008433.2 Cucumis melo HOM05D002903 ORTHO05D003066 2.4e-14 83.6 163 36.8
Cfa018400 Carpinus fangiana HOM05D002903 ORTHO05D003066 7.1e-14 82.0 206 30.1
Gohir.A05G383200 Gossypium hirsutum HOM05D002903 ORTHO05D003066 1.2e-13 81.3 225 33.8
Eucgr.F02770 Eucalyptus grandis HOM05D002903 ORTHO05D003066 1.6e-13 80.9 184 33.2
Gohir.D04G032100 Gossypium hirsutum HOM05D002903 ORTHO05D003066 1.6e-13 80.9 225 33.8
CsaV3_6G031200 Cucumis sativus L. HOM05D002903 ORTHO05D003066 2.1e-13 80.5 164 36.6
QL09p029695 Quercus lobata HOM05D002903 ORTHO05D003066 2.1e-13 80.5 138 39.1
Nn1g06302 Nelumbo nucifera HOM05D002903 ORTHO05D003066 2.7e-13 80.1 196 31.1
Nn5g28499 Nelumbo nucifera HOM05D002903 ORTHO05D003066 3.5e-13 79.7 218 30.3
Sp5g32140 Schrenkiella parvula HOM05D002903 ORTHO05D003066 3.5e-13 79.7 187 33.2
Haze_17666 Corylus avellana HOM05D002903 ORTHO05D003066 4.6e-13 79.3 173 31.8
Gorai.012G036500 Gossypium raimondii HOM05D002903 ORTHO05D003066 6.0e-13 79.0 225 33.3
Lj7P356T43 Lonicera japonica HOM05D002903 ORTHO05D003066 6.0e-13 79.0 164 35.4
Peaxi162Scf00505g00053 Petunia axillaris HOM05D002903 ORTHO05D003066 6.0e-13 79.0 153 34.0
Potri.002G075400 Populus trichocarpa HOM05D002903 ORTHO05D003066 6.0e-13 79.0 175 33.1
Medtr1g029550 Medicago truncatula HOM05D002903 ORTHO05D003066 7.9e-13 78.6 226 31.4
Phvul.001G065100 Phaseolus vulgaris HOM05D002903 ORTHO05D003066 7.9e-13 78.6 220 27.3
Aqoxy5G02305 Aquilegia oxysepala HOM05D002903 ORTHO05D003066 1.0e-12 78.2 214 29.4
CiPaw.15G024600 Carya illinoinensis HOM05D002903 ORTHO05D003066 1.3e-12 77.8 185 32.4
MBI03_g20844_MAGBIO Magnolia biondii HOM05D002903 ORTHO05D003066 1.8e-12 77.4 197 34.0
CARHR070490 Cardamine hirsuta HOM05D002903 ORTHO05D003066 2.3e-12 77.0 136 36.0
Gohir.D02G076000 Gossypium hirsutum HOM05D002903 ORTHO05D003066 2.3e-12 77.0 163 38.0
Gorai.005G085300 Gossypium raimondii HOM05D002903 ORTHO05D003066 2.3e-12 77.0 163 38.0
Nitab4.5_0008281g0010 Nicotiana tabacum HOM05D002903 ORTHO05D003066 3.0e-12 76.6 193 30.6
BcaB07g32128 Brassica carinata HOM05D002903 ORTHO05D003066 3.9e-12 76.3 134 35.8
Manes.02G172300 Manihot esculenta HOM05D002903 ORTHO05D003066 3.9e-12 76.3 144 34.0
Thhalv10019082m.g Eutrema salsugineum HOM05D002903 ORTHO05D003066 6.7e-12 75.5 202 33.2
FAN20G1459 Fragaria x ananassa HOM05D002903 ORTHO05D003066 8.7e-12 75.1 150 32.0
Gohir.A02G069300 Gossypium hirsutum HOM05D002903 ORTHO05D003066 8.7e-12 75.1 133 39.1
FAN24G3523 Fragaria x ananassa HOM05D002903 ORTHO05D003066 1.9e-11 73.9 155 32.3
VMungo0647G0886 Vigna mungo HOM05D002903 ORTHO05D003066 1.9e-11 73.9 231 26.0
Haze_25272 Corylus avellana HOM05D002903 ORTHO05D003066 2.5e-11 73.6 215 33.5
FvH4_2g15290 Fragaria vesca HOM05D002903 ORTHO05D003066 2.5e-11 73.6 155 31.6
Lj1g0027406 Lotus japonicus HOM05D002903 ORTHO05D003066 2.5e-11 73.6 228 29.8
Sed0005775 Sechium edule HOM05D002903 ORTHO05D003066 2.5e-11 73.6 217 30.9
CSS0044741 Camellia sinensis var. sinensis HOM05D002903 ORTHO05D003066 4.3e-11 72.8 207 30.0
AL2G37140 Arabidopsis lyrata HOM05D002903 ORTHO05D003066 7.4e-11 72.0 138 34.8
AL402U10010 Arabidopsis lyrata HOM05D002903 ORTHO05D003066 7.4e-11 72.0 138 34.8
CiPaw.03G119900 Carya illinoinensis HOM05D002903 ORTHO05D003066 7.4e-11 72.0 223 31.8
Haze_25271 Corylus avellana HOM05D002903 ORTHO05D003066 7.4e-11 72.0 205 34.1
Haze_25273 Corylus avellana HOM05D002903 ORTHO05D003066 7.4e-11 72.0 205 34.1
Dinv25773 Davidia involucrata HOM05D002903 ORTHO05D003066 7.4e-11 72.0 148 34.5
Sabra02G0058900 Salix brachista HOM05D002903 ORTHO05D003066 7.4e-11 72.0 176 31.2
Solyc06g059860.3 Solanum lycopersicum HOM05D002903 ORTHO05D003066 7.4e-11 72.0 173 31.2
PGSC0003DMG400012217 Solanum tuberosum HOM05D002903 ORTHO05D003066 7.4e-11 72.0 156 35.9
BcaC08g45488 Brassica carinata HOM05D000744 ORTHO05D000332 9.6e-11 71.6 174 30.5
C06p31570 Brassica napus HOM05D000744 ORTHO05D000332 9.6e-11 71.6 144 34.0
BolC6t38286H Brassica oleracea HOM05D002903 ORTHO05D003066 9.6e-11 71.6 174 30.5
RcHm_v2.0_Chr6g0278041 Rosa chinensis HOM05D002903 ORTHO05D003066 9.6e-11 71.6 153 32.7
Dinv41151 Davidia involucrata HOM05D002903 ORTHO05D003066 1.3e-10 71.2 135 34.8
Duzib187G0480 Durio zibethinus HOM05D002903 ORTHO05D003066 1.3e-10 71.2 233 30.9
FAN15G2216 Fragaria x ananassa HOM05D002903 ORTHO05D003066 1.3e-10 71.2 150 31.3
COL.COLO4_38160 Corchorus olitorius HOM05D002903 ORTHO05D003066 1.6e-10 70.9 141 34.0
Gohir.A02G112000 Gossypium hirsutum HOM05D002903 ORTHO05D003066 1.6e-10 70.9 135 34.8
Sabra05G0141500 Salix brachista HOM05D002903 ORTHO05D003066 1.6e-10 70.9 179 30.7
Solyc08g080860.4 Solanum lycopersicum HOM05D002903 ORTHO05D003066 2.1e-10 70.5 147 36.1
Sopen08g029160 Solanum pennellii HOM05D002903 ORTHO05D003066 2.1e-10 70.5 152 35.5
Carub.0001s2080 Capsella rubella HOM05D002903 ORTHO05D003066 2.8e-10 70.1 130 36.9
FAN27G1654 Fragaria x ananassa HOM05D002903 ORTHO05D003066 2.8e-10 70.1 143 32.2
PGR044G0841 Punica granatum HOM05D002903 ORTHO05D003066 2.8e-10 70.1 235 31.5
PGSC0003DMG400013037 Solanum tuberosum HOM05D002903 ORTHO05D003066 2.8e-10 70.1 179 30.7
AT1G76980 Arabidopsis thaliana HOM05D002903 ORTHO05D003066 3.6e-10 69.7 138 32.6
MSTRG.24179 Avicennia marina HOM05D002903 ORTHO05D003066 3.6e-10 69.7 224 27.2
MSTRG.25346 Avicennia marina HOM05D002903 ORTHO05D003066 3.6e-10 69.7 136 33.8
QL10p043057 Quercus lobata HOM05D002903 ORTHO05D003066 3.6e-10 69.7 223 32.3
Glyma.04G243500 Glycine max HOM05D002903 ORTHO05D003066 4.8e-10 69.3 214 27.6
Duzib041G0628 Durio zibethinus HOM05D002903 ORTHO05D003066 6.2e-10 68.9 134 34.3
Thhalv10008635m.g Eutrema salsugineum HOM05D002903 ORTHO05D003066 6.2e-10 68.9 181 28.7
Cc10_g13350 Coffea canephora HOM05D002903 ORTHO05D003066 8.1e-10 68.6 143 30.8
Oeu058296.1 Olea europaea HOM05D002903 ORTHO05D003066 8.1e-10 68.6 166 34.3
Sed0027661 Sechium edule HOM05D002903 ORTHO05D003066 8.1e-10 68.6 221 30.8
Gorai.013G109100 Gossypium raimondii HOM05D002903 ORTHO05D003066 1.4e-09 67.8 137 33.6
Sed0028073 Sechium edule HOM05D002903 ORTHO05D003066 1.4e-09 67.8 178 32.0
BcaB02g07090 Brassica carinata HOM05D002903 ORTHO05D003066 1.8e-09 67.4 143 33.6
Gohir.D03G062500 Gossypium hirsutum HOM05D002903 ORTHO05D003066 1.8e-09 67.4 137 33.6
Sopen06g019940 Solanum pennellii HOM05D002903 ORTHO05D003066 1.8e-09 67.4 173 29.5
Actinidia03429 Actinidia chinensis HOM05D002903 ORTHO05D003066 2.4e-09 67.0 199 31.2
A07p42590 Brassica napus HOM05D000744 ORTHO05D000332 2.4e-09 67.0 142 34.5
BraA06t24841Z Brassica rapa HOM05D002903 ORTHO05D003066 2.4e-09 67.0 141 32.6
Manes.18G084700 Manihot esculenta HOM05D002903 ORTHO05D003066 2.4e-09 67.0 182 30.2
A07p28150 Brassica napus HOM05D002903 ORTHO05D003066 3.1e-09 66.6 139 33.8
BolC6t40142H Brassica oleracea HOM05D002903 ORTHO05D003066 3.1e-09 66.6 220 28.6
BraA07t30459Z Brassica rapa HOM05D000744 ORTHO05D003066 3.1e-09 66.6 139 33.8
CARHR021780 Cardamine hirsuta HOM05D002903 ORTHO05D003066 3.1e-09 66.6 220 30.9
Peaxi162Scf00353g00026 Petunia axillaris HOM05D002903 ORTHO05D003066 3.1e-09 66.6 185 31.4
Potri.005G064700 Populus trichocarpa HOM05D002903 ORTHO05D003066 3.1e-09 66.6 240 30.4
SalBow6G1573 Salvia bowleyana HOM05D002903 ORTHO05D003066 3.1e-09 66.6 146 36.3
Thecc.01G134700 Theobroma cacao HOM05D002903 ORTHO05D003066 3.1e-09 66.6 181 34.3
A06p17430 Brassica napus HOM05D000744 ORTHO05D000332 4.0e-09 66.2 137 32.1
CSS0044801 Camellia sinensis var. sinensis HOM05D002903 ORTHO05D003066 4.0e-09 66.2 149 34.9
Psat6g040160 Pisum sativum HOM05D002903 ORTHO05D003066 4.0e-09 66.2 262 26.7
GSVIVG01022345001 Vitis vinifera HOM05D002903 ORTHO05D003066 4.0e-09 66.2 216 28.2
C05p20270 Brassica napus HOM05D000744 ORTHO05D000332 6.9e-09 65.5 136 34.6
BolC5t30721H Brassica oleracea HOM05D002903 ORTHO05D003066 6.9e-09 65.5 136 34.6
Duzib093G1863 Durio zibethinus HOM05D002903 ORTHO05D003066 6.9e-09 65.5 134 34.3
AL1G34490 Arabidopsis lyrata HOM05D002903 ORTHO05D003066 9.0e-09 65.1 139 32.4
Lsat_1_v5_gn_1_9061 Lactuca sativa HOM05D002903 ORTHO05D003066 9.0e-09 65.1 157 33.8
BcaC08g47201 Brassica carinata HOM05D002903 ORTHO05D003066 1.2e-08 64.7 203 30.5
DCAR_001203 Daucus carota HOM05D002903 ORTHO05D003066 1.2e-08 64.7 185 32.4
Migut.N03253 Erythranthe guttata HOM05D002903 ORTHO05D003066 1.2e-08 64.7 152 34.2
Lalb_Chr08g0240931 Lupinus albus HOM05D002903 ORTHO05D003066 1.2e-08 64.7 146 34.2
BcaC05g26046 Brassica carinata HOM05D002903 ORTHO05D003066 1.5e-08 64.3 136 33.8
Nitab4.5_0000496g0210 Nicotiana tabacum HOM05D002903 ORTHO05D003066 1.5e-08 64.3 125 35.2
PGR102G0277 Punica granatum HOM05D002903 ORTHO05D003066 1.5e-08 64.3 221 29.4
Sp1g18940 Schrenkiella parvula HOM05D002903 ORTHO05D003066 1.5e-08 64.3 137 32.8
Thecc.08G137400 Theobroma cacao HOM05D002903 ORTHO05D003066 1.5e-08 64.3 204 31.4
FAN26G0773 Fragaria x ananassa HOM05D002903 ORTHO05D003066 2.0e-08 63.9 209 30.6
Oeu045975.1 Olea europaea HOM05D002903 ORTHO05D003066 2.0e-08 63.9 126 33.3
PGR042G1875 Punica granatum HOM05D002903 ORTHO05D003066 2.0e-08 63.9 139 32.4
THA.LOC104812056 Tarenaya hassleriana HOM05D002903 ORTHO05D003066 2.0e-08 63.9 138 34.1
Cpa.g.sc26.66 Carica papaya HOM05D002903 ORTHO05D003066 2.6e-08 63.5 177 28.8
Dinv24393 Davidia involucrata HOM05D002903 ORTHO05D003066 2.6e-08 63.5 140 35.7
SalBow7G1710 Salvia bowleyana HOM05D002903 ORTHO05D003066 2.6e-08 63.5 151 33.1
Sed0025902 Sechium edule HOM05D002903 ORTHO05D003066 2.6e-08 63.5 166 30.7
Actinidia20071 Actinidia chinensis HOM05D002903 ORTHO05D003066 3.4e-08 63.2 175 30.3
COL.COLO4_35772 Corchorus olitorius HOM05D002903 ORTHO05D003066 3.4e-08 63.2 211 31.3
FvH4_1g24530 Fragaria vesca HOM05D002903 ORTHO05D003066 3.4e-08 63.2 209 30.1
Glyma.06G154700 Glycine max HOM05D002903 ORTHO05D003066 3.4e-08 63.2 210 28.1
THA.LOC104813698 Tarenaya hassleriana HOM05D002903 ORTHO05D003066 3.4e-08 63.2 147 33.3
VMungo1309G2413 Vigna mungo HOM05D002903 ORTHO05D003066 3.4e-08 63.2 182 32.4
Aa31LG4G7030 Aethionema arabicum HOM05D002903 ORTHO05D003066 4.5e-08 62.8 137 31.4
Aqoxy6G00279 Aquilegia oxysepala HOM05D002903 ORTHO05D003066 4.5e-08 62.8 216 25.9
BraA07t31783Z Brassica rapa HOM05D002903 ORTHO05D003066 4.5e-08 62.8 142 33.1
FAN19G0913 Fragaria x ananassa HOM05D002903 ORTHO05D003066 4.5e-08 62.8 211 29.9
Potri.005G185200 Populus trichocarpa HOM05D002903 ORTHO05D003066 4.5e-08 62.8 178 29.2
Actinidia06611 Actinidia chinensis HOM05D002903 ORTHO05D003066 5.8e-08 62.4 178 32.6
Aqoxy1G01928 Aquilegia oxysepala HOM05D002903 ORTHO05D003066 5.8e-08 62.4 113 34.5
Potri.007G104500 Populus trichocarpa HOM05D002903 ORTHO05D003066 5.8e-08 62.4 211 30.3
C06p51200 Brassica napus HOM05D000744 ORTHO05D000332 7.6e-08 62.0 136 33.1
Ca_16630_v3 Cicer arietinum L. HOM05D002903 ORTHO05D003066 7.6e-08 62.0 108 37.0
Dinv19537 Davidia involucrata HOM05D002903 ORTHO05D003066 7.6e-08 62.0 138 38.4
FAN28G2835 Fragaria x ananassa HOM05D002903 ORTHO05D003066 7.6e-08 62.0 213 28.6
Actinidia12224 Actinidia chinensis HOM05D002903 ORTHO05D003066 9.9e-08 61.6 214 29.4
Hma1.2p1_1125F.1_g259580 Hydrangea macrophylla HOM05D002903 ORTHO05D003066 9.9e-08 61.6 180 30.0
Nitab4.5_0005642g0020 Nicotiana tabacum HOM05D002903 ORTHO05D003066 9.9e-08 61.6 164 32.3
Oeu047153.1 Olea europaea HOM05D002903 ORTHO05D003066 9.9e-08 61.6 141 34.8
Peaxi162Scf00119g00051 Petunia axillaris HOM05D002903 ORTHO05D003066 9.9e-08 61.6 84 44.0
Eucgr.J01339 Eucalyptus grandis HOM05D002903 ORTHO05D003066 1.3e-07 61.2 206 28.6
Sc26g0002820 Simmondsia chinensis HOM05D002903 ORTHO05D003066 1.3e-07 61.2 200 31.0
Carub.0002s2388 Capsella rubella HOM05D002903 ORTHO05D003066 1.7e-07 60.8 161 32.3
DCAR_014329 Daucus carota HOM05D002903 ORTHO05D003066 1.7e-07 60.8 149 33.6
Lj1g0005014 Lotus japonicus HOM05D002903 ORTHO05D003066 1.7e-07 60.8 203 28.6
vmacro00875 Vaccinium macrocarpon HOM05D002903 ORTHO05D003066 1.7e-07 60.8 139 34.5
HanXRQChr10g0309091 Helianthus annuus HOM05D002903 ORTHO05D003066 2.2e-07 60.5 159 28.3
Hma1.2p1_2692F.1_g327010 Hydrangea macrophylla HOM05D002903 ORTHO05D003066 2.2e-07 60.5 137 34.3
SGA_v2.0_scaffold28G11961 Striga asiatica HOM05D002903 ORTHO05D003066 2.2e-07 60.5 188 28.7
TPR.G30561 Trifolium pratense HOM05D002903 ORTHO05D003066 2.2e-07 60.5 154 28.6
Cfa002912 Carpinus fangiana HOM05D002903 ORTHO05D003066 2.9e-07 60.1 214 28.5
Migut.H00687 Erythranthe guttata HOM05D002903 ORTHO05D003066 2.9e-07 60.1 159 35.8
AT1G21390 Arabidopsis thaliana HOM05D002903 ORTHO05D003066 3.8e-07 59.7 140 32.9
FAN23G0840 Fragaria x ananassa HOM05D002903 ORTHO05D003066 3.8e-07 59.7 211 30.8
MELO3C010580.2 Cucumis melo HOM05D002903 ORTHO05D003066 4.9e-07 59.3 116 33.6
Atru.chr13.1637 Acer truncatum HOM05D002903 ORTHO05D003066 8.4e-07 58.5 142 31.7
CsaV3_6G035580 Cucumis sativus L. HOM05D002903 ORTHO05D003066 8.4e-07 58.5 116 33.6
ECA234G1033 Erigeron canadensis HOM05D002903 ORTHO05D003066 8.4e-07 58.5 257 23.0
Hma1.2p1_0539F.1_g174540 Hydrangea macrophylla HOM05D002903 ORTHO05D003066 8.4e-07 58.5 149 31.5
BcaC05g26048 Brassica carinata HOM05D002903 ORTHO05D003066 1.1e-06 58.2 110 36.4
Glyma.06G119800 Glycine max HOM05D002903 ORTHO05D003066 1.1e-06 58.2 133 30.8
TWI60G0469 Tripterygium wilfordii HOM05D002903 ORTHO05D003066 1.1e-06 58.2 166 32.5
Atru.chr4.939 Acer truncatum HOM05D002903 ORTHO05D003066 1.4e-06 57.8 180 31.7
Gohir.D05G241400 Gossypium hirsutum HOM05D002903 ORTHO05D003066 1.4e-06 57.8 149 32.9
Gorai.009G250800 Gossypium raimondii HOM05D002903 ORTHO05D003066 1.4e-06 57.8 149 32.9
Prupe.4G272900 Prunus persica HOM05D002903 ORTHO05D003066 1.9e-06 57.4 213 28.6
MSTRG.1394 Avicennia marina HOM05D002903 ORTHO05D003066 2.4e-06 57.0 243 27.6
Oeu001551.1 Olea europaea HOM05D002903 ORTHO05D003066 2.4e-06 57.0 167 29.9
ClCG08G003270 Citrullus lanatus HOM05D002903 ORTHO05D003066 3.2e-06 56.6 119 34.5
Sabra07G0085500 Salix brachista HOM05D002903 ORTHO05D003066 3.2e-06 56.6 118 34.7
CiPaw.04G081400 Carya illinoinensis HOM05D002903 ORTHO05D003066 5.5e-06 55.8 193 31.6
Phvul.009G132400 Phaseolus vulgaris HOM05D002903 ORTHO05D003066 5.5e-06 55.8 216 30.6
SGA_v2.0_scaffold48G17917 Striga asiatica HOM05D002903 ORTHO05D003066 5.5e-06 55.8 131 37.4
TPR.G6299 Trifolium pratense HOM05D002903 ORTHO05D003066 5.5e-06 55.8 244 26.6
Rhsim11G0074400 Rhododendron simsii HOM05D002903 ORTHO05D003066 9.3e-06 55.1 121 31.4
Thecc.06G085500 Theobroma cacao HOM05D002903 ORTHO05D003066 9.3e-06 55.1 106 34.9


User provided reference genes

Program Settings