Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2795 Ceratophyllum demersum HOM05D001111 ORTHO05D000939 3.0e-105 385.2 197 100.0
CDE02G3744 Ceratophyllum demersum HOM05D001111 ORTHO05D000939 1.3e-63 246.9 146 87.0
TAR629G2362 Trochodendron aralioides HOM05D001111 ORTHO05D000939 9.4e-14 81.3 138 38.4
Nn4g22768 Nelumbo nucifera HOM05D001111 ORTHO05D000939 6.1e-13 78.6 107 44.9
TAR371G1086 Trochodendron aralioides HOM05D001111 ORTHO05D000939 8.0e-13 78.2 107 44.9
DCAR_021689 Daucus carota HOM05D001111 ORTHO05D000939 2.3e-12 76.6 140 40.0
Oeu043052.2 Olea europaea HOM05D001111 ORTHO05D000939 3.0e-12 76.3 180 31.1
Peaxi162Scf00129g00116 Petunia axillaris HOM05D001111 ORTHO05D000939 3.0e-12 76.3 144 36.8
TAR622G0132 Trochodendron aralioides HOM05D001111 ORTHO05D000939 5.2e-12 75.5 107 41.1
GSVIVG01032463001 Vitis vinifera HOM05D001111 ORTHO05D000939 8.8e-12 74.7 122 41.8
Hma1.2p1_0176F.1_g077400 Hydrangea macrophylla HOM05D001111 ORTHO05D000939 2.0e-11 73.6 110 43.6
Manes.14G065800 Manihot esculenta HOM05D001111 ORTHO05D000939 2.0e-11 73.6 142 35.9
SGA_v2.0_scaffold224G42977 Striga asiatica HOM05D001111 ORTHO05D000939 2.0e-11 73.6 145 33.1
Aqoxy3G02945 Aquilegia oxysepala HOM05D001111 ORTHO05D000939 4.4e-11 72.4 121 38.0
CiPaw.11G026300 Carya illinoinensis HOM05D001111 ORTHO05D000939 4.4e-11 72.4 115 44.3
Dinv35071 Davidia involucrata HOM05D005823 ORTHO05D007536 4.4e-11 72.4 144 38.9
Oeu060136.1 Olea europaea HOM05D001111 ORTHO05D000939 4.4e-11 72.4 152 32.9
Solyc03g114350.1 Solanum lycopersicum HOM05D001111 ORTHO05D000939 4.4e-11 72.4 115 40.9
Sopen03g033450 Solanum pennellii HOM05D001111 ORTHO05D000939 9.7e-11 71.2 115 40.0
MSTRG.23129 Avicennia marina HOM05D001111 ORTHO05D000939 1.3e-10 70.9 163 33.7
Dinv00507 Davidia involucrata HOM05D001111 ORTHO05D000939 1.3e-10 70.9 144 38.9
RcHm_v2.0_Chr2g0172191 Rosa chinensis HOM05D001111 ORTHO05D000939 1.7e-10 70.5 143 37.8
CDE06G0264 Ceratophyllum demersum HOM05D001111 ORTHO05D000939 2.2e-10 70.1 192 30.7
MBI10_g14555_MAGBIO Magnolia biondii HOM05D001111 ORTHO05D000939 2.2e-10 70.1 117 41.9
MSTRG.15514 Avicennia marina HOM05D001111 ORTHO05D000939 3.7e-10 69.3 140 34.3
DCAR_016484 Daucus carota HOM05D001111 ORTHO05D000939 3.7e-10 69.3 115 38.3
Gohir.D07G227700 Gossypium hirsutum HOM05D001111 ORTHO05D000939 4.8e-10 68.9 145 40.7
Manes.06G104800 Manihot esculenta HOM05D001111 ORTHO05D000939 4.8e-10 68.9 189 29.6
PGR142G1453 Punica granatum HOM05D001111 ORTHO05D000939 4.8e-10 68.9 138 37.7
Sed0001479 Sechium edule HOM05D001111 ORTHO05D000939 4.8e-10 68.9 134 36.6
CDE07G0471 Ceratophyllum demersum HOM05D001111 ORTHO05D000939 6.3e-10 68.6 189 29.6
PGSC0003DMG400024504 Solanum tuberosum HOM05D001111 ORTHO05D000939 6.3e-10 68.6 115 37.4
MSTRG.3168 Avicennia marina HOM05D001111 ORTHO05D000939 8.2e-10 68.2 133 38.3
CDE06G1645 Ceratophyllum demersum HOM05D000875 ORTHO05D000939 8.2e-10 68.2 155 32.3
MBI16_g32208_MAGBIO Magnolia biondii HOM05D001111 ORTHO05D000939 8.2e-10 68.2 143 34.3
Sc04g0001810 Simmondsia chinensis HOM05D001111 ORTHO05D000939 8.2e-10 68.2 157 34.4
DCAR_026134 Daucus carota HOM05D001111 ORTHO05D000939 1.1e-09 67.8 117 39.3
Thecc.04G010500 Theobroma cacao HOM05D001111 ORTHO05D000939 1.1e-09 67.8 172 33.7
TWI31G0459 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 1.1e-09 67.8 144 36.8
Cc07_g02140 Coffea canephora HOM05D001111 ORTHO05D000939 1.4e-09 67.4 187 35.3
MD09G1032200 Malus domestica HOM05D001111 ORTHO05D000939 1.4e-09 67.4 123 36.6
TWI39G0739 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 1.4e-09 67.4 136 37.5
Migut.H00111 Erythranthe guttata HOM05D001111 ORTHO05D000939 1.8e-09 67.0 133 36.1
PGSC0003DMG400030091 Solanum tuberosum HOM05D001111 ORTHO05D000939 1.8e-09 67.0 159 35.8
CDE04G3478 Ceratophyllum demersum HOM05D000875 ORTHO05D000684 2.4e-09 66.6 142 33.8
Duzib187G0831 Durio zibethinus HOM05D001111 ORTHO05D000939 2.4e-09 66.6 176 33.5
Atru.chr6.2310 Acer truncatum HOM05D001111 ORTHO05D000939 3.1e-09 66.2 187 30.5
CAN.G781.10 Capsicum annuum HOM05D001111 ORTHO05D000939 3.1e-09 66.2 119 37.0
Lju41C35T12 Lonicera japonica HOM05D001111 ORTHO05D000939 3.1e-09 66.2 161 31.7
CDE06G0711 Ceratophyllum demersum HOM05D001111 ORTHO05D043855 4.1e-09 65.9 179 34.6
Dinv02893 Davidia involucrata HOM05D001111 ORTHO05D000939 4.1e-09 65.9 173 33.5
Gorai.001G262600 Gossypium raimondii HOM05D001111 ORTHO05D000939 4.1e-09 65.9 145 40.0
Cpa.g.sc76.61 Carica papaya HOM05D001111 ORTHO05D000939 5.3e-09 65.5 182 31.9
Nitab4.5_0009783g0040 Nicotiana tabacum HOM05D001111 ORTHO05D000939 5.3e-09 65.5 137 34.3
CsaV3_5G027360 Cucumis sativus L. HOM05D001111 ORTHO05D000939 7.0e-09 65.1 137 36.5
Migut.I00012 Erythranthe guttata HOM05D001111 ORTHO05D000939 7.0e-09 65.1 172 32.0
Lj5P124T59 Lonicera japonica HOM05D001111 ORTHO05D000939 9.1e-09 64.7 104 37.5
CSS0041124 Camellia sinensis var. sinensis HOM05D001111 ORTHO05D000939 1.2e-08 64.3 116 38.8
Nitab4.5_0006281g0050 Nicotiana tabacum HOM05D001111 ORTHO05D000939 1.2e-08 64.3 186 30.1
PGSC0003DMG400030093 Solanum tuberosum HOM05D001111 ORTHO05D000939 1.2e-08 64.3 163 36.2
unitig_750.g28471 Utricularia gibba HOM05D001111 ORTHO05D000939 1.2e-08 64.3 160 35.6
SGA_v2.0_scaffold30G12462 Striga asiatica HOM05D001111 ORTHO05D000939 1.6e-08 63.9 159 31.4
MSTRG.24021 Avicennia marina HOM05D001111 ORTHO05D000939 2.0e-08 63.5 134 35.1
HanXRQChr09g0272191 Helianthus annuus HOM05D001111 ORTHO05D000939 2.0e-08 63.5 135 38.5
SalBow1G0495 Salvia bowleyana HOM05D001111 ORTHO05D000939 2.0e-08 63.5 128 35.2
Nitab4.5_0007719g0040 Nicotiana tabacum HOM05D001111 ORTHO05D000939 2.6e-08 63.2 136 33.1
Rhsim08G0172000 Rhododendron simsii HOM05D001111 ORTHO05D000939 2.6e-08 63.2 144 36.8
CSS0035264 Camellia sinensis var. sinensis HOM05D001111 ORTHO05D000939 3.5e-08 62.8 161 30.4
CSS0041696 Camellia sinensis var. sinensis HOM05D001111 ORTHO05D000939 3.5e-08 62.8 161 30.4
Lj9P449T21 Lonicera japonica HOM05D001111 ORTHO05D000939 3.5e-08 62.8 165 30.9
SalBow7G3341 Salvia bowleyana HOM05D001111 ORTHO05D000939 4.5e-08 62.4 181 28.7
Actinidia33068 Actinidia chinensis HOM05D001111 ORTHO05D000939 5.9e-08 62.0 188 30.3
CANSAT64G1643 Cannabis sativa HOM05D001111 ORTHO05D000939 5.9e-08 62.0 123 39.0
FAN17G1475 Fragaria x ananassa HOM05D001111 ORTHO05D000939 5.9e-08 62.0 166 33.1
Atru.chr9.2477 Acer truncatum HOM05D001111 ORTHO05D000939 7.7e-08 61.6 117 32.5
Gorai.011G095800 Gossypium raimondii HOM05D001111 ORTHO05D000939 7.7e-08 61.6 124 34.7
Dinv20655 Davidia involucrata HOM05D001111 ORTHO05D000939 1.0e-07 61.2 162 31.5
FvH4_6g50800 Fragaria vesca HOM05D001111 ORTHO05D000939 1.0e-07 61.2 120 40.0
FAN05G2415 Fragaria x ananassa HOM05D001111 ORTHO05D000939 1.0e-07 61.2 172 34.9
FAN14G5221 Fragaria x ananassa HOM05D001111 ORTHO05D000939 1.0e-07 61.2 101 43.6
Glyma.05G007000 Glycine max HOM05D001111 ORTHO05D000939 1.0e-07 61.2 196 30.1
Gohir.D10G087500 Gossypium hirsutum HOM05D001111 ORTHO05D000939 1.0e-07 61.2 124 34.7
Duzib205G1255 Durio zibethinus HOM05D001111 ORTHO05D000939 1.3e-07 60.8 153 33.3
Gohir.A07G221000 Gossypium hirsutum HOM05D001111 ORTHO05D000939 1.3e-07 60.8 134 40.3
PGSC0003DMG400000492 Solanum tuberosum HOM05D001111 ORTHO05D000939 1.3e-07 60.8 168 29.8
Manes.12G028200 Manihot esculenta HOM05D001111 ORTHO05D000939 1.7e-07 60.5 135 31.1
QL03p060170 Quercus lobata HOM05D001111 ORTHO05D000939 1.7e-07 60.5 114 35.1
Sed0026640 Sechium edule HOM05D001111 ORTHO05D000939 1.7e-07 60.5 149 34.2
TWI56G0447 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 1.7e-07 60.5 204 27.9
vmacro18255 Vaccinium macrocarpon HOM05D001111 ORTHO05D000939 1.7e-07 60.5 159 32.1
Sc07g0003050 Simmondsia chinensis HOM05D001111 ORTHO05D000939 2.2e-07 60.1 133 32.3
CiPaw.05G151600 Carya illinoinensis HOM05D001111 ORTHO05D000939 2.9e-07 59.7 139 35.3
Cc04_g14080 Coffea canephora HOM05D001111 ORTHO05D000939 2.9e-07 59.7 151 33.1
Migut.K01372 Erythranthe guttata HOM05D001111 ORTHO05D000939 2.9e-07 59.7 160 29.4
FAN22G0614 Fragaria x ananassa HOM05D001111 ORTHO05D000939 2.9e-07 59.7 178 30.9
Sed0020184 Sechium edule HOM05D001111 ORTHO05D000939 2.9e-07 59.7 166 28.9
MSTRG.3297 Avicennia marina HOM05D001111 ORTHO05D000939 3.8e-07 59.3 192 28.6
Duzib147G1636 Durio zibethinus HOM05D001111 ORTHO05D000939 3.8e-07 59.3 142 35.9
FAN09G0168 Fragaria x ananassa HOM05D001111 ORTHO05D000939 3.8e-07 59.3 175 34.9
Glyma.19G007600 Glycine max HOM05D001111 ORTHO05D000939 3.8e-07 59.3 143 34.3
MD14G1180400 Malus domestica HOM05D001111 ORTHO05D000939 3.8e-07 59.3 154 31.2
Oeu062983.1 Olea europaea HOM05D001111 ORTHO05D000939 3.8e-07 59.3 126 36.5
CAN.G206.25 Capsicum annuum HOM05D001111 ORTHO05D000939 5.0e-07 58.9 151 30.5
MELO3C002262.2 Cucumis melo HOM05D001111 ORTHO05D000939 5.0e-07 58.9 157 33.1
Dinv24843 Davidia involucrata HOM05D001111 ORTHO05D000939 5.0e-07 58.9 97 36.1
Duzib264G1045 Durio zibethinus HOM05D001111 ORTHO05D000939 5.0e-07 58.9 122 35.2
FvH4_4g34370 Fragaria vesca HOM05D001111 ORTHO05D000939 5.0e-07 58.9 111 38.7
FAN12G3240 Fragaria x ananassa HOM05D001111 ORTHO05D000939 5.0e-07 58.9 111 38.7
Ah.02g110500 Amaranthus hybridus HOM05D001111 ORTHO05D000939 6.5e-07 58.5 177 29.9
FAN02G0682 Fragaria x ananassa HOM05D001111 ORTHO05D000939 6.5e-07 58.5 120 39.2
RcHm_v2.0_Chr4g0443781 Rosa chinensis HOM05D001111 ORTHO05D000939 6.5e-07 58.5 116 35.3
Sp5g25500 Schrenkiella parvula HOM05D001111 ORTHO05D000939 6.5e-07 58.5 147 30.6
Sopen02g031580 Solanum pennellii HOM05D001111 ORTHO05D000939 6.5e-07 58.5 162 30.2
Lsat_1_v5_gn_0_14901 Lactuca sativa HOM05D001111 ORTHO05D000939 8.5e-07 58.2 130 32.3
CiPaw.12G026500 Carya illinoinensis HOM05D001111 ORTHO05D000939 1.1e-06 57.8 120 36.7
Gohir.A10G103400 Gossypium hirsutum HOM05D001111 ORTHO05D000939 1.1e-06 57.8 137 32.8
Oeu037698.1 Olea europaea HOM05D001111 ORTHO05D000939 1.1e-06 57.8 185 28.6
QL02p076295 Quercus lobata HOM05D001111 ORTHO05D000939 1.1e-06 57.8 165 30.3
Sabra12G0057900 Salix brachista HOM05D001111 ORTHO05D000939 1.1e-06 57.8 132 34.8
Oeu062980.1 Olea europaea HOM05D001111 ORTHO05D000939 1.5e-06 57.4 158 29.7
Potri.012G081000 Populus trichocarpa HOM05D001111 ORTHO05D000939 1.5e-06 57.4 131 32.1
Prupe.5G173800 Prunus persica HOM05D001111 ORTHO05D000939 1.5e-06 57.4 159 32.1
QL10p011670 Quercus lobata HOM05D001111 ORTHO05D000939 1.5e-06 57.4 129 35.7
Phvul.008G155400 Phaseolus vulgaris HOM05D001111 ORTHO05D000939 1.9e-06 57.0 75 45.3
A07p36790 Brassica napus HOM05D001111 ORTHO05D000939 2.5e-06 56.6 103 35.9
BraA07t31246Z Brassica rapa HOM05D001111 ORTHO05D000939 2.5e-06 56.6 103 35.9
Oeu037699.1 Olea europaea HOM05D001111 ORTHO05D000939 2.5e-06 56.6 155 30.3
Oeu040830.1 Olea europaea HOM05D001111 ORTHO05D000939 2.5e-06 56.6 181 30.4
Oeu040831.1 Olea europaea HOM05D001111 ORTHO05D000939 2.5e-06 56.6 181 30.4
Oeu048646.1 Olea europaea HOM05D001111 ORTHO05D000939 2.5e-06 56.6 153 30.1
VMungo1383G2935 Vigna mungo HOM05D001111 ORTHO05D000939 2.5e-06 56.6 61 54.1
ClCG01G013130 Citrullus lanatus HOM05D001111 ORTHO05D000939 3.2e-06 56.2 159 31.4
FAN04G3199 Fragaria x ananassa HOM05D001111 ORTHO05D000939 3.2e-06 56.2 152 32.2
Lsat_1_v5_gn_0_15021 Lactuca sativa HOM05D001111 ORTHO05D000939 3.2e-06 56.2 180 27.2
Nitab4.5_0007208g0010 Nicotiana tabacum HOM05D001111 ORTHO05D000939 3.2e-06 56.2 164 26.8
SGA_v2.0_scaffold205G41690 Striga asiatica HOM05D001111 ORTHO05D000939 3.2e-06 56.2 130 33.8
SGA_v2.0_scaffold25G10842 Striga asiatica HOM05D001111 ORTHO05D000939 3.2e-06 56.2 170 29.4
FvH4_5g05310 Fragaria vesca HOM05D001111 ORTHO05D000939 4.2e-06 55.8 154 31.2
FAN08G1819 Fragaria x ananassa HOM05D001111 ORTHO05D000939 4.2e-06 55.8 127 33.1
FAN18G1119 Fragaria x ananassa HOM05D001111 ORTHO05D000939 4.2e-06 55.8 154 31.2
Glyma.16G073400 Glycine max HOM05D001111 ORTHO05D000939 4.2e-06 55.8 190 30.0
Potri.015G076400 Populus trichocarpa HOM05D001111 ORTHO05D000939 4.2e-06 55.8 130 33.8
CsaV3_1G008460 Cucumis sativus L. HOM05D001111 ORTHO05D000939 5.5e-06 55.5 149 33.6
FAN07G0616 Fragaria x ananassa HOM05D001111 ORTHO05D000939 5.5e-06 55.5 181 27.1
FAN13G1071 Fragaria x ananassa HOM05D001111 ORTHO05D000939 5.5e-06 55.5 161 31.1
Lalb_Chr06g0176001 Lupinus albus HOM05D001111 ORTHO05D000939 5.5e-06 55.5 82 48.8
Thecc.03G012600 Theobroma cacao HOM05D001111 ORTHO05D000939 5.5e-06 55.5 123 35.8
CAN.G464.41 Capsicum annuum HOM05D001111 ORTHO05D000939 7.2e-06 55.1 178 31.5
ClCG09G018990 Citrullus lanatus HOM05D001111 ORTHO05D000939 7.2e-06 55.1 143 32.9
Glyma.19G065000 Glycine max HOM05D001111 ORTHO05D000939 7.2e-06 55.1 71 42.3
Peaxi162Scf00017g02910 Petunia axillaris HOM05D001111 ORTHO05D000939 7.2e-06 55.1 73 45.2
Oeu022162.1 Olea europaea HOM05D001111 ORTHO05D000939 9.4e-06 54.7 75 40.0
Prupe.1G253100 Prunus persica HOM05D001111 ORTHO05D000939 9.4e-06 54.7 191 27.7
Sc16g0003590 Simmondsia chinensis HOM05D001111 ORTHO05D000939 9.4e-06 54.7 177 28.2
Solyc12g062220.1 Solanum lycopersicum HOM05D001111 ORTHO05D000939 9.4e-06 54.7 164 34.1


User provided reference genes

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