Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2778 Ceratophyllum demersum HOM05D006750 ORTHO05D008426 5.8e-103 377.5 179 100.0
Nn7g38126 Nelumbo nucifera HOM05D006750 ORTHO05D008426 3.4e-47 192.2 145 60.7
TAR627G0115 Trochodendron aralioides HOM05D006750 ORTHO05D008426 2.5e-45 186.0 140 61.4
PSO541G1844 Papaver somniferum HOM05D006750 ORTHO05D008426 3.9e-43 178.7 143 60.1
GSVIVG01012094001 Vitis vinifera HOM05D006750 ORTHO05D008426 5.1e-43 178.3 127 63.0
CSS0019703 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 1.1e-42 177.2 124 62.1
Dinv11873 Davidia involucrata HOM05D006750 ORTHO05D008426 1.1e-42 177.2 132 62.9
PSO675G8070 Papaver somniferum HOM05D006750 ORTHO05D008426 2.5e-42 176.0 143 59.4
Lj1A1143T38 Lonicera japonica HOM05D006750 ORTHO05D008426 4.3e-42 175.3 134 58.2
Hma1.2p1_0040F.1_g025070 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 9.7e-42 174.1 128 64.1
CSS0027015 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 2.8e-41 172.6 123 60.2
Atru.chr12.2220 Acer truncatum HOM05D006750 ORTHO05D008426 8.2e-41 171.0 123 60.2
Aqoxy1G01469 Aquilegia oxysepala HOM05D006750 ORTHO05D008426 8.2e-41 171.0 159 52.8
vmacro03507 Vaccinium macrocarpon HOM05D006750 ORTHO05D008426 8.2e-41 171.0 123 61.8
DCAR_004323 Daucus carota HOM05D006750 ORTHO05D008426 2.4e-40 169.5 133 54.9
Oeu052673.2 Olea europaea HOM05D006750 ORTHO05D008426 3.1e-40 169.1 133 57.1
Ciclev10016972m.g Citrus clementina HOM05D006750 ORTHO05D008426 4.1e-40 168.7 127 59.1
MD10G1234600 Malus domestica HOM05D006750 ORTHO05D008426 5.3e-40 168.3 127 57.5
Cc09_g06280 Coffea canephora HOM05D006750 ORTHO05D008426 6.9e-40 167.9 127 56.7
Carub.0004s2150 Capsella rubella HOM05D006750 ORTHO05D008426 1.2e-39 167.2 132 58.3
Haze_06024 Corylus avellana HOM05D006750 ORTHO05D008426 2.6e-39 166.0 123 57.7
RhsimUnG0232200 Rhododendron simsii HOM05D006750 ORTHO05D008426 2.6e-39 166.0 148 51.4
Actinidia22388 Actinidia chinensis HOM05D006750 ORTHO05D008426 3.4e-39 165.6 160 50.0
Potri.012G120100 Populus trichocarpa HOM05D006750 ORTHO05D008426 5.9e-39 164.9 130 54.6
Haze_06026 Corylus avellana HOM05D006750 ORTHO05D008426 7.7e-39 164.5 123 56.9
BcaC02g11618 Brassica carinata HOM05D006750 ORTHO05D008426 1.3e-38 163.7 129 57.4
BcaC02g12068 Brassica carinata HOM05D006750 ORTHO05D008426 1.3e-38 163.7 133 57.1
C04p08300 Brassica napus HOM05D006750 ORTHO05D008426 1.3e-38 163.7 133 57.1
C04p13120 Brassica napus HOM05D006750 ORTHO05D008426 1.3e-38 163.7 129 57.4
BraA05t19661Z Brassica rapa HOM05D006750 ORTHO05D008426 1.3e-38 163.7 129 57.4
HanXRQChr07g0189661 Helianthus annuus HOM05D006750 ORTHO05D008426 1.3e-38 163.7 140 52.9
Solyc02g069070.3 Solanum lycopersicum HOM05D006750 ORTHO05D008426 1.3e-38 163.7 127 56.7
AL4G36810 Arabidopsis lyrata HOM05D006750 ORTHO05D008426 1.7e-38 163.3 130 56.2
BolC4t22432H Brassica oleracea HOM05D006750 ORTHO05D008426 1.7e-38 163.3 129 58.1
BcaB02g09122 Brassica carinata HOM05D006750 ORTHO05D008426 2.2e-38 162.9 130 58.5
CAN.G1222.19 Capsicum annuum HOM05D006750 ORTHO05D008426 2.2e-38 162.9 123 58.5
MD05G1254400 Malus domestica HOM05D006750 ORTHO05D008426 2.2e-38 162.9 123 58.5
Nitab4.5_0003773g0080 Nicotiana tabacum HOM05D006750 ORTHO05D008426 2.2e-38 162.9 126 57.9
Thecc.06G141200 Theobroma cacao HOM05D006750 ORTHO05D008426 3.8e-38 162.2 123 58.5
FAN25G1681 Fragaria x ananassa HOM05D006750 ORTHO05D008426 5.0e-38 161.8 127 53.5
Manes.11G104340 Manihot esculenta HOM05D006750 ORTHO05D008426 5.0e-38 161.8 144 50.7
SGA_v2.0_scaffold298G47680 Striga asiatica HOM05D006750 ORTHO05D008426 5.0e-38 161.8 126 59.5
FvH4_3g12150 Fragaria vesca HOM05D006750 ORTHO05D008426 8.5e-38 161.0 123 54.5
FAN16G3293 Fragaria x ananassa HOM05D006750 ORTHO05D008426 8.5e-38 161.0 123 54.5
Migut.M01971 Erythranthe guttata HOM05D006750 ORTHO05D008426 1.4e-37 160.2 140 53.6
Potri.012G120220 Populus trichocarpa HOM05D006750 ORTHO05D008426 1.4e-37 160.2 130 53.8
A05p06970 Brassica napus HOM05D006750 ORTHO05D008426 1.9e-37 159.8 129 56.6
CARHR134300 Cardamine hirsuta HOM05D006750 ORTHO05D008426 1.9e-37 159.8 146 52.1
Prupe.4G110300 Prunus persica HOM05D006750 ORTHO05D008426 1.9e-37 159.8 127 54.3
AT2G39440 Arabidopsis thaliana HOM05D006750 ORTHO05D008426 2.5e-37 159.5 130 55.4
CiPaw.10G065100 Carya illinoinensis HOM05D006750 ORTHO05D008426 3.2e-37 159.1 125 55.2
Thhalv10017350m.g Eutrema salsugineum HOM05D006750 ORTHO05D008426 3.2e-37 159.1 131 56.5
Thecc.06G140200 Theobroma cacao HOM05D006750 ORTHO05D008426 3.2e-37 159.1 122 58.2
Gorai.009G437900 Gossypium raimondii HOM05D006750 ORTHO05D008426 4.2e-37 158.7 123 59.3
Nitab4.5_0002056g0050 Nicotiana tabacum HOM05D006750 ORTHO05D008426 4.2e-37 158.7 126 57.1
MELO3C021769.2 Cucumis melo HOM05D006750 ORTHO05D008426 9.4e-37 157.5 123 61.0
HPP92_004186 Vanilla planifolia HOM05D006750 ORTHO05D008426 1.2e-36 157.1 126 57.1
Duzib235G0570 Durio zibethinus HOM05D006750 ORTHO05D008426 2.1e-36 156.4 123 58.5
Gohir.D05G369200 Gossypium hirsutum HOM05D006750 ORTHO05D008426 2.1e-36 156.4 123 58.5
Gohir.A04G017000 Gossypium hirsutum HOM05D006750 ORTHO05D008426 4.7e-36 155.2 123 58.5
CsaV3_1G046580 Cucumis sativus L. HOM05D006750 ORTHO05D008426 1.8e-35 153.3 123 57.7
Lj4g0008374 Lotus japonicus HOM05D006750 ORTHO05D008426 1.8e-35 153.3 127 54.3
RcHm_v2.0_Chr5g0019891 Rosa chinensis HOM05D006750 ORTHO05D008426 1.8e-35 153.3 123 52.8
ClCG01G009300 Citrullus lanatus HOM05D006750 ORTHO05D008426 3.0e-35 152.5 140 52.9
PGR142G2582 Punica granatum HOM05D006750 ORTHO05D008426 3.0e-35 152.5 123 54.5
TWI63G0081 Tripterygium wilfordii HOM05D006750 ORTHO05D008426 3.0e-35 152.5 133 52.6
CANSAT21G0613 Cannabis sativa HOM05D006750 ORTHO05D008426 3.9e-35 152.1 130 53.1
Sp4g21740 Schrenkiella parvula HOM05D006750 ORTHO05D008426 5.1e-35 151.8 130 55.4
SalBow8G0594 Salvia bowleyana HOM05D006750 ORTHO05D008426 6.7e-35 151.4 127 54.3
SalBow8G2736 Salvia bowleyana HOM05D006750 ORTHO05D008426 6.7e-35 151.4 127 54.3
Sed0026407 Sechium edule HOM05D006750 ORTHO05D008426 8.8e-35 151.0 123 57.7
Eucgr.D01041 Eucalyptus grandis HOM05D006750 ORTHO05D008426 1.5e-34 150.2 133 51.1
MSTRG.22268 Avicennia marina HOM05D006750 ORTHO05D008426 2.0e-34 149.8 137 51.1
Sabra15G0136900 Salix brachista HOM05D006750 ORTHO05D008426 2.6e-34 149.4 127 51.2
Lsat_1_v5_gn_5_36321 Lactuca sativa HOM05D006750 ORTHO05D008426 5.7e-34 148.3 125 55.2
Ca_21154_v3 Cicer arietinum L. HOM05D006750 ORTHO05D008426 7.4e-34 147.9 128 52.3
AUR62007362 Chenopodium quinoa HOM05D006750 ORTHO05D008426 2.8e-33 146.0 132 54.5
EL10Ac2g02809 Beta vulgaris HOM05D006750 ORTHO05D008426 4.8e-33 145.2 137 51.8
THA.LOC104824253 Tarenaya hassleriana HOM05D006750 ORTHO05D008426 4.8e-33 145.2 138 50.0
unitig_748.g7497 Utricularia gibba HOM05D006750 ORTHO05D008426 6.3e-33 144.8 123 52.8
Phvul.003G153500 Phaseolus vulgaris HOM05D006750 ORTHO05D008426 8.2e-33 144.4 124 50.0
Psat0s3953g0080 Pisum sativum HOM05D006750 ORTHO05D008426 8.2e-33 144.4 130 50.0
ECA246G4127 Erigeron canadensis HOM05D006750 ORTHO05D008426 1.8e-32 143.3 119 54.6
QL11p018076 Quercus lobata HOM05D006750 ORTHO05D008426 1.8e-32 143.3 139 46.8
AUR62018626 Chenopodium quinoa HOM05D006750 ORTHO05D008426 7.0e-32 141.4 132 53.8
Sc05g0005750 Simmondsia chinensis HOM05D006750 ORTHO05D008426 7.0e-32 141.4 121 52.9
VMungo1215G0360 Vigna mungo HOM05D006750 ORTHO05D008426 1.2e-31 140.6 124 50.0
Sp4g08180 Schrenkiella parvula HOM05D006750 ORTHO05D008426 2.0e-31 139.8 136 50.7
Glyma.02G206800 Glycine max HOM05D006750 ORTHO05D008426 3.5e-31 139.0 124 50.8
arahy.Tifrunner.gnm1.ann1.RPZE8L Arachis hypogaea HOM05D006750 ORTHO05D008426 3.8e-30 135.6 127 48.0
arahy.Tifrunner.gnm1.ann1.8322W6 Arachis hypogaea HOM05D006750 ORTHO05D008426 5.0e-30 135.2 127 48.0
TPR.G24866 Trifolium pratense HOM05D006750 ORTHO05D008426 6.5e-30 134.8 128 48.4
Ah.12g055560 Amaranthus hybridus HOM05D002269 ORTHO05D002421 1.1e-29 134.0 178 42.1
Os02g0168900 Oryza sativa ssp. japonica HOM05D006750 ORTHO05D008426 2.5e-29 132.9 120 52.5
Lalb_Chr02g0152091 Lupinus albus HOM05D006750 ORTHO05D008426 6.1e-28 128.3 129 46.5
Hma1.2p1_0040F.1_g025080 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 2.6e-26 122.9 93 62.4
COL.COLO4_30981 Corchorus olitorius HOM05D006750 ORTHO05D008426 8.2e-25 117.9 90 58.9
Cfa000723 Carpinus fangiana HOM05D006750 ORTHO05D008426 1.4e-24 117.1 93 53.8
ATR0763G132 Amborella trichopoda HOM05D006750 ORTHO05D008426 3.1e-24 115.9 125 46.4
Mapoly0007s0049 Marchantia polymorpha HOM05D006750 ORTHO05D008426 5.3e-24 115.2 134 41.0
Aa31LG5G20440 Aethionema arabicum HOM05D004294 ORTHO05D004899 9.1e-24 114.4 96 56.2
CARHR087370 Cardamine hirsuta HOM05D006750 ORTHO05D008426 1.5e-21 107.1 77 59.7
CBR_g39953 Chara braunii HOM05D006750 ORTHO05D008426 2.5e-21 106.3 151 37.1
SMO367G1186 Selaginella moellendorffii HOM05D006750 ORTHO05D008426 1.2e-20 104.0 117 40.2
SHI31544 Sapria himalayana HOM05D006750 ORTHO05D008426 3.6e-20 102.4 203 32.0
Pp3c2_9480 Physcomitrium patens HOM05D006750 ORTHO05D008426 2.3e-19 99.8 136 37.5
Cpa.g.sc135.32 Carica papaya HOM05D006750 ORTHO05D008426 5.7e-18 95.1 65 64.6
Hund11170 Selenicereus undatus HOM05D006750 ORTHO05D008426 1.3e-17 94.0 60 65.0
Peaxi162Scf00149g00921 Petunia axillaris HOM05D006750 ORTHO05D008426 3.7e-17 92.4 127 40.2
AagrBONN_evm.TU.Sc2ySwM_344.3424 Anthoceros agrestis HOM05D006750 ORTHO05D008426 2.9e-14 82.8 98 40.8
Zm00001eb233030 Zea mays HOM05D006750 ORTHO05D008426 8.8e-11 71.2 128 33.6
Hund11169 Selenicereus undatus HOM05D006750 ORTHO05D008426 4.1e-08 62.4 73 43.8
Sopen02g018170 Solanum pennellii HOM05D006750 ORTHO05D008426 4.1e-08 62.4 45 57.8
PRCOL_00005799 Prasinoderma coloniale HOM05D006750 ORTHO05D008426 4.5e-07 58.9 122 27.9
TPR.G24917 Trifolium pratense HOM05D006750 ORTHO05D008426 5.9e-07 58.5 40 57.5
Zm00001eb233050 Zea mays HOM05D006750 ORTHO05D008426 1.7e-06 57.0 107 31.8


User provided reference genes

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