Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2764 Ceratophyllum demersum HOM05D004219 ORTHO05D004857 2.2e-159 565.5 264 100.0
CDE04G3533 Ceratophyllum demersum HOM05D004219 ORTHO05D004857 1.7e-156 555.8 264 97.7
MBI13_g01684_MAGBIO Magnolia biondii HOM05D004219 ORTHO05D004857 2.3e-124 449.1 254 81.9
Nn6g35715 Nelumbo nucifera HOM05D004219 ORTHO05D004857 1.5e-123 446.4 253 80.6
Atru.chr7.1779 Acer truncatum HOM05D004219 ORTHO05D004857 5.7e-123 444.5 254 81.9
Ciclev10007563m.g Citrus clementina HOM05D004219 ORTHO05D004857 7.4e-123 444.1 253 81.8
Dinv20389 Davidia involucrata HOM05D004219 ORTHO05D004857 2.2e-122 442.6 257 80.5
Peaxi162Scf00177g00619 Petunia axillaris HOM05D004219 ORTHO05D004857 4.8e-122 441.4 255 81.6
Manes.16G089900 Manihot esculenta HOM05D004219 ORTHO05D004857 6.3e-122 441.0 253 81.4
Sabra18G0057200 Salix brachista HOM05D004219 ORTHO05D004857 1.8e-121 439.5 254 81.9
TWI63G0110 Tripterygium wilfordii HOM05D004219 ORTHO05D004857 1.8e-121 439.5 253 81.4
Hund05707 Selenicereus undatus HOM05D004219 ORTHO05D004857 2.4e-121 439.1 251 79.7
Potri.018G064500 Populus trichocarpa HOM05D004219 ORTHO05D004857 4.1e-121 438.3 254 81.5
TAR383G0549 Trochodendron aralioides HOM05D004219 ORTHO05D004857 5.3e-121 438.0 253 80.6
Gohir.A05G036600 Gossypium hirsutum HOM05D004219 ORTHO05D004857 6.9e-121 437.6 253 81.8
Rhsim08G0243800 Rhododendron simsii HOM05D004219 ORTHO05D004857 9.0e-121 437.2 255 80.8
TAR624G1175 Trochodendron aralioides HOM05D004219 ORTHO05D004857 1.2e-120 436.8 257 79.0
GSVIVG01015005001 Vitis vinifera HOM05D004219 ORTHO05D004857 1.5e-120 436.4 253 80.6
CSS0000587 Camellia sinensis var. sinensis HOM05D004219 ORTHO05D004857 2.0e-120 436.0 255 80.0
CSS0038823 Camellia sinensis var. sinensis HOM05D004219 ORTHO05D004857 2.0e-120 436.0 255 80.0
Gohir.D05G038100 Gossypium hirsutum HOM05D004219 ORTHO05D004857 2.0e-120 436.0 253 81.4
Gorai.009G038600 Gossypium raimondii HOM05D004219 ORTHO05D004857 2.0e-120 436.0 253 81.4
Actinidia21828 Actinidia chinensis HOM05D004219 ORTHO05D004857 3.4e-120 435.3 255 80.0
GSVIVG01016680001 Vitis vinifera HOM05D004219 ORTHO05D004857 3.4e-120 435.3 255 80.4
Manes.03G045300 Manihot esculenta HOM05D004219 ORTHO05D004857 4.5e-120 434.9 254 80.3
vmacro15080 Vaccinium macrocarpon HOM05D004219 ORTHO05D004857 4.5e-120 434.9 255 80.8
QL11p003182 Quercus lobata HOM05D004219 ORTHO05D004857 7.7e-120 434.1 253 81.4
Gohir.A06G084100 Gossypium hirsutum HOM05D004219 ORTHO05D004857 1.3e-119 433.3 252 81.0
PGSC0003DMG400028852 Solanum tuberosum HOM05D004219 ORTHO05D004857 1.3e-119 433.3 255 80.4
Duzib168G0770 Durio zibethinus HOM05D004219 ORTHO05D004857 1.7e-119 433.0 252 80.2
CAN.G1721.2 Capsicum annuum HOM05D004219 ORTHO05D004857 2.2e-119 432.6 256 80.5
Eucgr.C00764 Eucalyptus grandis HOM05D004219 ORTHO05D004857 2.2e-119 432.6 253 79.4
Gohir.D07G017300 Gossypium hirsutum HOM05D004219 ORTHO05D004857 2.9e-119 432.2 252 80.6
Gorai.001G018000 Gossypium raimondii HOM05D004219 ORTHO05D004857 2.9e-119 432.2 252 80.6
Potri.006G135500 Populus trichocarpa HOM05D004219 ORTHO05D004857 2.9e-119 432.2 253 80.2
Cpa.g.sc82.51 Carica papaya HOM05D004219 ORTHO05D004857 3.8e-119 431.8 252 80.2
Duzib187G1712 Durio zibethinus HOM05D004219 ORTHO05D004857 3.8e-119 431.8 252 81.0
Thecc.09G069400 Theobroma cacao HOM05D004219 ORTHO05D004857 3.8e-119 431.8 252 79.8
Nitab4.5_0000357g0090 Nicotiana tabacum HOM05D004219 ORTHO05D004857 5.0e-119 431.4 256 80.1
DCAR_016092 Daucus carota HOM05D004219 ORTHO05D004857 6.5e-119 431.0 255 78.0
Gohir.A07G017500 Gossypium hirsutum HOM05D004219 ORTHO05D004857 6.5e-119 431.0 253 79.8
Sopen12g024040 Solanum pennellii HOM05D004219 ORTHO05D004857 8.5e-119 430.6 256 79.7
Cc04_g00810 Coffea canephora HOM05D004219 ORTHO05D004857 1.4e-118 429.9 254 79.5
Haze_16129 Corylus avellana HOM05D004219 ORTHO05D004857 1.4e-118 429.9 257 77.0
QL05p001473 Quercus lobata HOM05D004219 ORTHO05D004857 1.4e-118 429.9 257 76.7
QL05p001749 Quercus lobata HOM05D004219 ORTHO05D004857 1.4e-118 429.9 257 76.7
CANSAT56G2968 Cannabis sativa HOM05D004219 ORTHO05D004857 1.9e-118 429.5 255 77.3
Nitab4.5_0004589g0030 Nicotiana tabacum HOM05D004219 ORTHO05D004857 1.9e-118 429.5 256 80.1
Gohir.D06G082300 Gossypium hirsutum HOM05D004219 ORTHO05D004857 2.5e-118 429.1 252 80.6
FvH4_6g35710 Fragaria vesca HOM05D004219 ORTHO05D004857 3.2e-118 428.7 257 76.3
FAN02G2730 Fragaria x ananassa HOM05D004219 ORTHO05D004857 3.2e-118 428.7 257 76.3
FAN09G1853 Fragaria x ananassa HOM05D004219 ORTHO05D004857 3.2e-118 428.7 257 76.3
FAN14G4832 Fragaria x ananassa HOM05D004219 ORTHO05D004857 3.2e-118 428.7 257 76.3
Lj5A30T66 Lonicera japonica HOM05D004219 ORTHO05D004857 3.2e-118 428.7 256 78.9
Solyc12g049570.3 Solanum lycopersicum HOM05D004219 ORTHO05D004857 4.2e-118 428.3 256 79.3
TWI34G1001 Tripterygium wilfordii HOM05D004219 ORTHO05D004857 4.2e-118 428.3 253 79.4
Gorai.010G095800 Gossypium raimondii HOM05D004219 ORTHO05D004857 5.5e-118 427.9 252 80.6
RcHm_v2.0_Chr2g0147711 Rosa chinensis HOM05D004219 ORTHO05D004857 7.2e-118 427.6 257 75.9
Cfa003467 Carpinus fangiana HOM05D004219 ORTHO05D004857 1.2e-117 426.8 255 77.3
CiPaw.02G131700 Carya illinoinensis HOM05D004219 ORTHO05D004857 1.2e-117 426.8 257 76.3
PSO724G0293 Papaver somniferum HOM05D004219 ORTHO05D004857 1.2e-117 426.8 254 77.6
Prupe.3G031800 Prunus persica HOM05D004219 ORTHO05D004857 1.6e-117 426.4 255 77.6
HanXRQChr09g0277221 Helianthus annuus HOM05D004219 ORTHO05D004857 3.6e-117 425.2 255 78.0
Lj6g0016067 Lotus japonicus HOM05D004219 ORTHO05D004857 3.6e-117 425.2 253 78.7
ECA232G2871 Erigeron canadensis HOM05D004219 ORTHO05D004857 4.6e-117 424.9 255 77.6
Lalb_Chr23g0276141 Lupinus albus HOM05D004219 ORTHO05D004857 1.0e-116 423.7 253 78.3
TPR.G26875 Trifolium pratense HOM05D004219 ORTHO05D004857 2.3e-116 422.5 253 77.9
PSO135G0149 Papaver somniferum HOM05D004219 ORTHO05D004857 3.0e-116 422.2 254 77.6
Duzib150G0120 Durio zibethinus HOM05D004219 ORTHO05D004857 3.9e-116 421.8 253 79.8
MELO3C022696.2 Cucumis melo HOM05D004219 ORTHO05D004857 6.7e-116 421.0 257 75.5
CsaV3_3G030980 Cucumis sativus L. HOM05D004219 ORTHO05D004857 6.7e-116 421.0 257 75.1
CiPaw.01G212300 Carya illinoinensis HOM05D004219 ORTHO05D004857 1.1e-115 420.2 255 75.3
Medtr2g044550 Medicago truncatula HOM05D004219 ORTHO05D004857 1.5e-115 419.9 253 77.5
Glyma.09G074300 Glycine max HOM05D004219 ORTHO05D004857 2.5e-115 419.1 253 77.5
Glyma.16G013100 Glycine max HOM05D004219 ORTHO05D004857 5.7e-115 417.9 253 75.5
Lalb_Chr08g0232811 Lupinus albus HOM05D004219 ORTHO05D004857 5.7e-115 417.9 253 76.3
MD17G1153300 Malus domestica HOM05D004219 ORTHO05D004857 1.7e-114 416.4 255 75.3
ATR0099G075 Amborella trichopoda HOM05D004219 ORTHO05D004857 2.2e-114 416.0 258 76.7
Glyma.07G045100 Glycine max HOM05D004219 ORTHO05D004857 2.2e-114 416.0 253 75.1
HPP92_019289 Vanilla planifolia HOM05D004219 ORTHO05D004857 2.2e-114 416.0 265 72.8
Glyma.U031325 Glycine max HOM05D004219 ORTHO05D004857 2.8e-114 415.6 253 77.1
Phvul.009G223200 Phaseolus vulgaris HOM05D004219 ORTHO05D004857 2.8e-114 415.6 255 78.0
Phvul.010G123900 Phaseolus vulgaris HOM05D004219 ORTHO05D004857 2.8e-114 415.6 254 74.4
AUR62025624 Chenopodium quinoa HOM05D004219 ORTHO05D004857 4.8e-114 414.8 286 67.8
MD09G1173700 Malus domestica HOM05D004219 ORTHO05D004857 4.8e-114 414.8 255 74.9
CARHR153440 Cardamine hirsuta HOM05D004219 ORTHO05D004857 6.3e-114 414.5 254 75.6
Aqoxy7G00940 Aquilegia oxysepala HOM05D004219 ORTHO05D004857 8.2e-114 414.1 255 77.3
Migut.I01126 Erythranthe guttata HOM05D004219 ORTHO05D004857 1.1e-113 413.7 256 75.8
VMungo0331G1133 Vigna mungo HOM05D004219 ORTHO05D004857 2.4e-113 412.5 252 74.6
PGR142G3683 Punica granatum HOM05D004219 ORTHO05D004857 3.1e-113 412.1 253 75.5
Aa31LG4G12950 Aethionema arabicum HOM05D004219 ORTHO05D004857 5.3e-113 411.4 257 75.1
VMungo1309G2772 Vigna mungo HOM05D004219 ORTHO05D004857 9.1e-113 410.6 255 76.9
BcaB01g01229 Brassica carinata HOM05D004219 ORTHO05D004857 1.5e-112 409.8 257 74.7
Lj3g0000905 Lotus japonicus HOM05D004219 ORTHO05D004857 1.5e-112 409.8 252 74.6
Oeu059024.1 Olea europaea HOM05D004219 ORTHO05D004857 2.0e-112 409.5 255 75.7
AT3G43240 Arabidopsis thaliana HOM05D004219 ORTHO05D004857 2.6e-112 409.1 254 75.6
Sp5g18450 Schrenkiella parvula HOM05D004219 ORTHO05D004857 2.6e-112 409.1 257 75.5
THA.LOC104799604 Tarenaya hassleriana HOM05D004219 ORTHO05D004857 2.6e-112 409.1 259 73.7
Zm00001eb313820 Zea mays HOM05D004219 ORTHO05D004857 3.4e-112 408.7 256 75.0
AL5G21340 Arabidopsis lyrata HOM05D004219 ORTHO05D004857 4.5e-112 408.3 254 75.6
Thhalv10002415m.g Eutrema salsugineum HOM05D004219 ORTHO05D004857 5.9e-112 407.9 257 74.7
BcaC01g02109 Brassica carinata HOM05D004219 ORTHO05D004857 7.7e-112 407.5 257 74.3
Carub.0005s0906 Capsella rubella HOM05D004219 ORTHO05D004857 1.0e-111 407.1 254 74.8
TPR.G18148 Trifolium pratense HOM05D004219 ORTHO05D004857 1.0e-111 407.1 252 73.0
arahy.Tifrunner.gnm1.ann1.B45F8N Arachis hypogaea HOM05D004219 ORTHO05D004857 1.3e-111 406.8 253 73.5
arahy.Tifrunner.gnm1.ann1.W70I1I Arachis hypogaea HOM05D004219 ORTHO05D004857 1.3e-111 406.8 253 73.5
Lalb_Chr17g0343311 Lupinus albus HOM05D004219 ORTHO05D004857 1.3e-111 406.8 249 75.1
Psat4g165840 Pisum sativum HOM05D004219 ORTHO05D004857 1.7e-111 406.4 247 73.3
A06p22640 Brassica napus HOM05D004219 ORTHO05D004857 2.9e-111 405.6 258 74.4
BraA06t25350Z Brassica rapa HOM05D004219 ORTHO05D004857 2.9e-111 405.6 258 74.4
Medtr8g022980 Medicago truncatula HOM05D004219 ORTHO05D004857 2.9e-111 405.6 252 73.0
Ca_23428_v3 Cicer arietinum L. HOM05D004219 ORTHO05D004857 3.8e-111 405.2 252 72.6
Lalb_Chr04g0253891 Lupinus albus HOM05D004219 ORTHO05D004857 5.0e-111 404.8 246 74.8
BolC3t19092H Brassica oleracea HOM05D004219 ORTHO05D004857 1.9e-110 402.9 258 74.0
Aqoxy7G04168 Aquilegia oxysepala HOM05D004219 ORTHO05D004857 7.2e-110 401.0 256 72.3
Hma1.2p1_0229F.1_g097030 Hydrangea macrophylla HOM05D004219 ORTHO05D004857 9.4e-110 400.6 255 73.7
Sed0001277 Sechium edule HOM05D004219 ORTHO05D004857 2.1e-109 399.4 255 72.9
Sc15g0000780 Simmondsia chinensis HOM05D004219 ORTHO05D004857 7.9e-109 397.5 252 74.6
Sed0013084 Sechium edule HOM05D004219 ORTHO05D004857 3.9e-108 395.2 257 72.4
Eucgr.I02158 Eucalyptus grandis HOM05D004219 ORTHO05D004857 1.7e-106 389.8 223 78.9
Os08g0451400 Oryza sativa ssp. japonica HOM05D004219 ORTHO05D004857 1.7e-106 389.8 243 73.3
Zm00001eb099960 Zea mays HOM05D004219 ORTHO05D004857 1.7e-106 389.8 256 72.3
unitig_26.g8917 Utricularia gibba HOM05D004219 ORTHO05D004857 1.4e-105 386.7 253 71.1
CsaV3_7G034010 Cucumis sativus L. HOM05D004219 ORTHO05D004857 3.1e-105 385.6 256 71.1
ClCG09G001310 Citrullus lanatus HOM05D004219 ORTHO05D004857 5.3e-105 384.8 256 69.9
PGR044G2279 Punica granatum HOM05D004219 ORTHO05D004857 7.7e-104 380.9 231 74.9
unitig_749.g14037 Utricularia gibba HOM05D004219 ORTHO05D004857 1.7e-103 379.8 257 69.6
Sed0013718 Sechium edule HOM05D004219 ORTHO05D004857 5.0e-103 378.3 254 69.7
COL.COLO4_21198 Corchorus olitorius HOM05D004219 ORTHO05D004857 1.1e-102 377.1 252 72.6
AUR62001416 Chenopodium quinoa HOM05D004219 ORTHO05D004857 6.1e-101 371.3 221 75.6
ClCG07G014320 Citrullus lanatus HOM05D004219 ORTHO05D004857 5.2e-100 368.2 225 76.9
Actinidia24435 Actinidia chinensis HOM05D004219 ORTHO05D004857 9.7e-99 364.0 205 82.9
EL10Ac7g16483 Beta vulgaris HOM05D004219 ORTHO05D004857 1.6e-96 356.7 251 68.9
Ah.08g217310 Amaranthus hybridus HOM05D004219 ORTHO05D004857 1.5e-94 350.1 251 67.3
Cfa002934 Carpinus fangiana HOM05D004219 ORTHO05D004857 1.2e-93 347.1 222 76.6
Lsat_1_v5_gn_4_92081 Lactuca sativa HOM05D004219 ORTHO05D004857 1.2e-93 347.1 225 74.2
arahy.Tifrunner.gnm1.ann1.BBC6WZ Arachis hypogaea HOM05D004219 ORTHO05D004857 6.8e-92 341.3 250 67.6
arahy.Tifrunner.gnm1.ann1.82J223 Arachis hypogaea HOM05D004219 ORTHO05D004857 5.7e-91 338.2 212 73.6
Haze_26074 Corylus avellana HOM05D004219 ORTHO05D004857 3.7e-90 335.5 286 60.8
Ca_02284_v3 Cicer arietinum L. HOM05D004219 ORTHO05D004857 2.0e-88 329.7 253 65.2
Mapoly0094s0004 Marchantia polymorpha HOM05D004219 ORTHO05D004857 2.7e-88 329.3 206 70.9
SMO133G0025 Selaginella moellendorffii HOM05D004219 ORTHO05D004857 6.5e-87 324.7 198 73.2
Pp3c15_1350 Physcomitrium patens HOM05D004219 ORTHO05D004857 1.2e-85 320.5 182 75.8
Pp3c6_26590 Physcomitrium patens HOM05D004219 ORTHO05D004857 1.4e-84 317.0 209 68.4
Sabra06G0106200 Salix brachista HOM05D004219 ORTHO05D004857 3.4e-83 312.4 193 78.8
Zm00001eb040700 Zea mays HOM05D004219 ORTHO05D004857 9.8e-83 310.8 193 70.5
AagrBONN_evm.TU.Sc2ySwM_344.4361 Anthoceros agrestis HOM05D004219 ORTHO05D004857 1.4e-81 307.0 173 74.6
SEGI_01121 Sequoiadendron giganteum HOM05D004219 ORTHO05D004857 1.4e-81 307.0 186 72.0
MELO3C024313.2 Cucumis melo HOM05D004219 ORTHO05D004857 1.6e-80 303.5 256 59.4
TAR626G0374 Trochodendron aralioides HOM05D004219 ORTHO05D004857 7.0e-73 278.1 254 57.9
SGA_v2.0_scaffold71G23915 Striga asiatica HOM05D004219 ORTHO05D004857 3.9e-63 245.7 257 52.5
Psat1g137920 Pisum sativum HOM05D004219 ORTHO05D004857 7.1e-57 224.9 159 69.8
Cre10.g429880 Chlamydomonas reinhardtii HOM05D004219 ORTHO05D004857 4.4e-51 205.7 181 53.6
CBR_g66811 Chara braunii HOM05D004219 ORTHO05D004857 3.1e-44 183.0 110 72.7
Os09g0434000 Oryza sativa ssp. japonica HOM05D004219 ORTHO05D004857 2.4e-36 156.8 93 77.4
FAN05G1825 Fragaria x ananassa HOM05D004219 ORTHO05D004857 1.8e-28 130.6 66 80.3
MCO07G528 Micromonas commoda HOM05D004219 ORTHO05D004857 2.8e-13 80.1 122 37.7
BolSC21t60256H Brassica oleracea HOM05D020425 ORTHO05D021983 1.5e-11 74.3 111 42.3
C03p67880 Brassica napus HOM05D020425 ORTHO05D021983 5.0e-10 69.3 105 40.0


User provided reference genes

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