Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2742 Ceratophyllum demersum HOM05D007044 ORTHO05D008981 1.9e-101 372.5 182 100.0
TAR381G1118 Trochodendron aralioides HOM05D007044 ORTHO05D008981 4.2e-69 265.0 182 70.9
MBI03_g18677_MAGBIO Magnolia biondii HOM05D007044 ORTHO05D008981 6.1e-68 261.2 181 69.6
Thecc.01G145800 Theobroma cacao HOM05D007044 ORTHO05D008981 7.5e-66 254.2 182 68.7
ATR1136G039 Amborella trichopoda HOM05D007044 ORTHO05D008981 4.9e-65 251.5 181 66.9
Actinidia19938 Actinidia chinensis HOM05D007044 ORTHO05D008981 6.3e-65 251.1 182 67.0
Aqoxy6G00095 Aquilegia oxysepala HOM05D007044 ORTHO05D008981 1.8e-64 249.6 175 69.1
TWI75G1760 Tripterygium wilfordii HOM05D007044 ORTHO05D008981 5.4e-64 248.1 182 67.6
Sed0003346 Sechium edule HOM05D007044 ORTHO05D008981 9.2e-64 247.3 182 65.4
Ca_09906_v3 Cicer arietinum L. HOM05D007044 ORTHO05D008981 5.9e-63 244.6 182 64.8
Phvul.007G114400 Phaseolus vulgaris HOM05D007044 ORTHO05D008981 5.9e-63 244.6 182 65.4
PSO170G6074 Papaver somniferum HOM05D007044 ORTHO05D008981 2.3e-62 242.7 184 65.8
Glyma.20G214500 Glycine max HOM05D007044 ORTHO05D008981 2.9e-62 242.3 182 64.8
THA.LOC104827319 Tarenaya hassleriana HOM05D007044 ORTHO05D008981 5.0e-62 241.5 182 63.2
HPP92_022004 Vanilla planifolia HOM05D007044 ORTHO05D008981 6.6e-62 241.1 182 67.0
GSVIVG01000252001 Vitis vinifera HOM05D007044 ORTHO05D008981 6.6e-62 241.1 182 65.9
Lj7A490G62 Lonicera japonica HOM05D007044 ORTHO05D008981 8.6e-62 240.7 187 64.2
Medtr1g077040 Medicago truncatula HOM05D007044 ORTHO05D008981 8.6e-62 240.7 182 64.3
MELO3C024642.2 Cucumis melo HOM05D007044 ORTHO05D008981 1.1e-61 240.4 182 62.6
PSO782G5479 Papaver somniferum HOM05D007044 ORTHO05D008981 1.1e-61 240.4 184 65.2
Haze_19360 Corylus avellana HOM05D007044 ORTHO05D008981 1.5e-61 240.0 183 65.0
Dinv05984 Davidia involucrata HOM05D007044 ORTHO05D008981 2.5e-61 239.2 181 64.1
vmacro05323 Vaccinium macrocarpon HOM05D007044 ORTHO05D008981 2.5e-61 239.2 184 64.7
TPR.G16624 Trifolium pratense HOM05D007044 ORTHO05D008981 3.3e-61 238.8 182 63.2
VMungo0720G2193 Vigna mungo HOM05D007044 ORTHO05D008981 3.3e-61 238.8 182 65.4
Cfa020928 Carpinus fangiana HOM05D007044 ORTHO05D008981 4.3e-61 238.4 183 64.5
Duzib147G1221 Durio zibethinus HOM05D007044 ORTHO05D008981 1.6e-60 236.5 182 64.8
Psat6g111960 Pisum sativum HOM05D007044 ORTHO05D008981 1.6e-60 236.5 182 62.6
PGR119G1191 Punica granatum HOM05D007044 ORTHO05D008981 4.7e-60 235.0 182 65.4
Ciclev10027575m.g Citrus clementina HOM05D007044 ORTHO05D008981 6.1e-60 234.6 184 64.1
AT3G56570 Arabidopsis thaliana HOM05D007044 ORTHO05D008981 8.0e-60 234.2 182 61.0
CSS0017775 Camellia sinensis var. sinensis HOM05D007044 ORTHO05D008981 8.0e-60 234.2 177 63.8
Cpa.g.sc138.45 Carica papaya HOM05D007044 ORTHO05D008981 8.0e-60 234.2 183 65.0
AL5G37940 Arabidopsis lyrata HOM05D007044 ORTHO05D008981 1.4e-59 233.4 182 61.0
ClCG04G002800 Citrullus lanatus HOM05D007044 ORTHO05D008981 1.5e-58 229.9 203 58.1
Hma1.2p1_0050F.1_g029110 Hydrangea macrophylla HOM05D007044 ORTHO05D008981 1.5e-58 229.9 188 59.0
Lj5g0011072 Lotus japonicus HOM05D007044 ORTHO05D008981 1.5e-58 229.9 182 61.0
EL10Ac4g09721 Beta vulgaris HOM05D007044 ORTHO05D008981 2.6e-58 229.2 182 60.4
Gohir.A05G375000 Gossypium hirsutum HOM05D007044 ORTHO05D008981 3.4e-58 228.8 182 62.1
arahy.Tifrunner.gnm1.ann1.H6ML7T Arachis hypogaea HOM05D007044 ORTHO05D008981 5.7e-58 228.0 188 60.6
Lalb_Chr06g0168751 Lupinus albus HOM05D007044 ORTHO05D008981 7.5e-58 227.6 182 62.1
QL10p037666 Quercus lobata HOM05D007044 ORTHO05D008981 7.5e-58 227.6 181 61.3
Gorai.012G045900 Gossypium raimondii HOM05D007044 ORTHO05D008981 9.8e-58 227.3 182 62.1
Sabra04G0082400 Salix brachista HOM05D007044 ORTHO05D008981 2.9e-57 225.7 177 62.1
arahy.Tifrunner.gnm1.ann1.B8MN22 Arachis hypogaea HOM05D007044 ORTHO05D008981 6.4e-57 224.6 192 59.4
Carub.0005s2331 Capsella rubella HOM05D007044 ORTHO05D008981 8.3e-57 224.2 182 58.8
Gohir.D04G040700 Gossypium hirsutum HOM05D007044 ORTHO05D008981 8.3e-57 224.2 182 61.5
AUR62000601 Chenopodium quinoa HOM05D007044 ORTHO05D008981 1.8e-56 223.0 182 58.8
SGA_v2.0_scaffold13G06483 Striga asiatica HOM05D007044 ORTHO05D008981 2.4e-56 222.6 187 59.4
Sp5g05990 Schrenkiella parvula HOM05D007044 ORTHO05D008981 7.0e-56 221.1 182 58.2
Aa31LG10G11390 Aethionema arabicum HOM05D007044 ORTHO05D008981 9.2e-56 220.7 193 57.0
Lsat_1_v5_gn_2_40340 Lactuca sativa HOM05D007044 ORTHO05D008981 9.2e-56 220.7 184 58.2
Ah.02g118170 Amaranthus hybridus HOM05D007044 ORTHO05D008981 3.5e-55 218.8 182 58.2
Migut.F00913 Erythranthe guttata HOM05D007044 ORTHO05D008981 2.3e-54 216.1 195 56.9
Oeu063700.1 Olea europaea HOM05D007044 ORTHO05D008981 3.9e-54 215.3 186 56.5
PGSC0003DMG400004247 Solanum tuberosum HOM05D007044 ORTHO05D008981 3.9e-54 215.3 183 55.2
SEGI_35790 Sequoiadendron giganteum HOM05D007044 ORTHO05D008981 6.6e-54 214.5 185 58.9
A09p49450 Brassica napus HOM05D007044 ORTHO05D008981 3.3e-53 212.2 182 56.6
BraA09t40398Z Brassica rapa HOM05D007044 ORTHO05D008981 3.3e-53 212.2 182 56.6
Manes.13G154300 Manihot esculenta HOM05D007044 ORTHO05D008981 7.3e-53 211.1 183 60.7
SalBow6G1252 Salvia bowleyana HOM05D007044 ORTHO05D008981 7.3e-53 211.1 201 54.2
C08p31830 Brassica napus HOM05D007044 ORTHO05D008981 3.6e-52 208.8 182 56.0
AUR62006952 Chenopodium quinoa HOM05D007044 ORTHO05D008981 3.6e-52 208.8 182 55.5
BcaC07g39965 Brassica carinata HOM05D007044 ORTHO05D008981 4.7e-52 208.4 182 56.0
BolC8t50802H Brassica oleracea HOM05D007044 ORTHO05D008981 4.7e-52 208.4 182 56.0
Os01g0879500 Oryza sativa ssp. japonica HOM05D007044 ORTHO05D008981 4.7e-52 208.4 184 56.0
BcaC07g40141 Brassica carinata HOM05D007044 ORTHO05D008981 1.8e-51 206.5 183 55.2
CAN.G10.5 Capsicum annuum HOM05D007044 ORTHO05D008981 6.8e-51 204.5 181 55.8
Mapoly0010s0148 Marchantia polymorpha HOM05D007044 ORTHO05D008981 8.9e-51 204.1 185 51.4
Zm00001eb366280 Zea mays HOM05D007044 ORTHO05D008981 2.2e-49 199.5 182 56.0
unitig_61.g26193 Utricularia gibba HOM05D007044 ORTHO05D008981 1.6e-47 193.4 223 47.1
SMO169G0173 Selaginella moellendorffii HOM05D007044 ORTHO05D008981 2.0e-47 193.0 183 54.6
HanXRQChr10g0285851 Helianthus annuus HOM05D007044 ORTHO05D008981 1.4e-43 180.3 147 61.9
FAN26G2478 Fragaria x ananassa HOM05D007044 ORTHO05D008981 2.3e-43 179.5 183 50.8
RcHm_v2.0_Chr3g0485001 Rosa chinensis HOM05D007044 ORTHO05D008981 8.9e-43 177.6 183 49.7
Nitab4.5_0001785g0040 Nicotiana tabacum HOM05D007044 ORTHO05D008981 1.2e-42 177.2 183 50.8
FAN19G0897 Fragaria x ananassa HOM05D007044 ORTHO05D008981 2.0e-42 176.4 183 50.3
FvH4_1g25860 Fragaria vesca HOM05D007044 ORTHO05D008981 7.5e-42 174.5 183 49.7
FAN23G2791 Fragaria x ananassa HOM05D007044 ORTHO05D008981 2.2e-41 172.9 183 50.3
Prupe.4G288100 Prunus persica HOM05D007044 ORTHO05D008981 1.1e-37 160.6 200 45.5
MD00G1030500 Malus domestica HOM05D007044 ORTHO05D008981 2.9e-33 146.0 193 45.1
Pp3c8_4410 Physcomitrium patens HOM05D007044 ORTHO05D008981 1.9e-32 143.3 131 52.7
Atru.chr3.1445 Acer truncatum HOM05D007044 ORTHO05D008981 3.0e-22 109.4 79 63.3
Rhsim10G0120300 Rhododendron simsii HOM05D007044 ORTHO05D008981 3.9e-22 109.0 99 55.6
Nn3g20178 Nelumbo nucifera HOM05D007044 ORTHO05D008981 2.5e-21 106.3 87 59.8
ECA240G2444 Erigeron canadensis HOM05D007044 ORTHO05D008981 5.6e-21 105.1 69 62.3
Hma1.2p1_0050F.1_g029120 Hydrangea macrophylla HOM05D007044 ORTHO05D008981 6.2e-20 101.7 67 65.7
Potri.004G135700 Populus trichocarpa HOM05D007044 ORTHO05D008981 6.2e-20 101.7 71 63.4
Sc16g0009910 Simmondsia chinensis HOM05D007044 ORTHO05D008981 6.2e-20 101.7 65 69.2
Cre07.g346418 Chlamydomonas reinhardtii HOM05D007044 ORTHO05D008981 9.0e-19 97.8 162 32.7
CARHR166680 Cardamine hirsuta HOM05D007044 ORTHO05D008981 2.0e-18 96.7 69 59.4
CiPaw.15G185700 Carya illinoinensis HOM05D007044 ORTHO05D008981 2.0e-18 96.7 65 69.2
Hund07191 Selenicereus undatus HOM05D007044 ORTHO05D008981 1.3e-17 94.0 65 64.6
Thhalv10006013m.g Eutrema salsugineum HOM05D007044 ORTHO05D008981 2.2e-17 93.2 69 58.0
CsaV3_4G029950 Cucumis sativus L. HOM05D007044 ORTHO05D008981 2.9e-17 92.8 58 69.0
PRCOL_00000171 Prasinoderma coloniale HOM05D007044 ORTHO05D008981 1.4e-16 90.5 168 36.9
FAN28G0850 Fragaria x ananassa HOM05D007044 ORTHO05D008981 9.3e-16 87.8 108 41.7
arahy.Tifrunner.gnm1.ann1.H6TAT4 Arachis hypogaea HOM05D006665 ORTHO05D008327 2.3e-14 83.2 55 67.3
arahy.Tifrunner.gnm1.ann1.8K57QZ Arachis hypogaea HOM05D001339 ORTHO05D008981 3.0e-14 82.8 61 60.7
Cpa.g.sc138.46 Carica papaya HOM05D007044 ORTHO05D008981 1.1e-13 80.9 63 58.7
MCO07G433 Micromonas commoda HOM05D007044 ORTHO05D008981 5.6e-13 78.6 169 30.8
MCO12G445 Micromonas commoda HOM05D007044 ORTHO05D008981 9.6e-13 77.8 203 29.1
Pp3c22_6390 Physcomitrium patens HOM05D004224 ORTHO05D006437 1.3e-12 77.4 167 29.9
Mapoly0016s0035 Marchantia polymorpha HOM05D005656 ORTHO05D006437 2.2e-09 66.6 164 26.2
Zm00001eb347700 Zea mays HOM05D001443 ORTHO05D001352 3.8e-09 65.9 48 58.3
MCO12G473 Micromonas commoda HOM05D005456 ORTHO05D006805 1.1e-08 64.3 167 27.5
SMO367G0558 Selaginella moellendorffii HOM05D005456 ORTHO05D006805 1.4e-08 63.9 181 27.1
SMO351G0583 Selaginella moellendorffii HOM05D005656 ORTHO05D007094 1.9e-08 63.5 166 28.3
AagrBONN_evm.TU.Sc2ySwM_117.735 Anthoceros agrestis HOM05D004224 ORTHO05D006437 2.4e-08 63.2 166 28.3
Rhsim12G0132700 Rhododendron simsii HOM05D005456 ORTHO05D006805 7.1e-08 61.6 168 28.0
Actinidia33219 Actinidia chinensis HOM05D005456 ORTHO05D006805 1.2e-07 60.8 168 27.4
Actinidia16039 Actinidia chinensis HOM05D007044 ORTHO05D008981 2.1e-07 60.1 121 37.2
ATR0564G531 Amborella trichopoda HOM05D005456 ORTHO05D006805 5.1e-06 55.5 167 29.3


User provided reference genes

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