Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2716 Ceratophyllum demersum HOM05D006726 ORTHO05D008328 2.9e-224 781.6 395 100.0
CDE08G1235 Ceratophyllum demersum HOM05D004967 ORTHO05D006146 1.0e-88 331.3 218 85.3
GSVIVG01025422001 Vitis vinifera HOM05D006726 ORTHO05D008328 8.3e-62 241.9 366 44.0
TAR636G2476 Trochodendron aralioides HOM05D006726 ORTHO05D008328 2.4e-61 240.4 390 41.0
Aqoxy1G00428 Aquilegia oxysepala HOM05D006726 ORTHO05D008328 7.8e-60 235.3 378 41.8
HanXRQChr13g0405181 Helianthus annuus HOM05D006726 ORTHO05D008328 4.3e-58 229.6 396 40.7
Glyma.05G155400 Glycine max HOM05D006726 ORTHO05D008328 5.6e-58 229.2 382 40.3
Ciclev10015417m.g Citrus clementina HOM05D006726 ORTHO05D008328 9.5e-58 228.4 363 41.3
MD03G1007100 Malus domestica HOM05D006726 ORTHO05D008328 9.5e-58 228.4 364 41.5
Potri.003G218100 Populus trichocarpa HOM05D006726 ORTHO05D008328 2.1e-57 227.3 365 41.6
Glyma.08G113300 Glycine max HOM05D006726 ORTHO05D008328 4.7e-57 226.1 362 40.9
Duzib170G1137 Durio zibethinus HOM05D006726 ORTHO05D008328 6.2e-57 225.7 367 39.5
Dinv13438 Davidia involucrata HOM05D006726 ORTHO05D008328 1.8e-56 224.2 369 41.5
Cc01_g02530 Coffea canephora HOM05D006726 ORTHO05D008328 4.0e-56 223.0 374 43.0
ECA233G4338 Erigeron canadensis HOM05D006726 ORTHO05D008328 4.0e-56 223.0 373 41.8
Gohir.D08G021900 Gossypium hirsutum HOM05D006726 ORTHO05D008328 4.0e-56 223.0 382 38.7
Atru.chr3.2327 Acer truncatum HOM05D006726 ORTHO05D008328 5.2e-56 222.6 375 39.5
Prupe.6G006700 Prunus persica HOM05D006726 ORTHO05D008328 8.9e-56 221.9 365 41.6
Lalb_Chr07g0186641 Lupinus albus HOM05D006726 ORTHO05D008328 1.5e-55 221.1 373 40.2
Gohir.A08G011400 Gossypium hirsutum HOM05D006726 ORTHO05D008328 2.0e-55 220.7 383 38.9
CANSAT11G1445 Cannabis sativa HOM05D006726 ORTHO05D008328 2.6e-55 220.3 394 39.3
PSO339G4123 Papaver somniferum HOM05D006726 ORTHO05D008328 4.4e-55 219.5 375 41.3
arahy.Tifrunner.gnm1.ann1.FL4TQK Arachis hypogaea HOM05D006726 ORTHO05D008328 5.8e-55 219.2 362 39.8
Gorai.004G017200 Gossypium raimondii HOM05D006726 ORTHO05D008328 7.6e-55 218.8 382 38.0
Rhsim13G0230700 Rhododendron simsii HOM05D006726 ORTHO05D008328 7.6e-55 218.8 371 41.8
VMungo0251G2876 Vigna mungo HOM05D006726 ORTHO05D008328 9.9e-55 218.4 376 41.0
Haze_22974 Corylus avellana HOM05D006726 ORTHO05D008328 1.3e-54 218.0 379 39.1
arahy.Tifrunner.gnm1.ann1.GT4ACT Arachis hypogaea HOM05D006726 ORTHO05D008328 1.7e-54 217.6 362 40.1
Phvul.002G235500 Phaseolus vulgaris HOM05D006726 ORTHO05D008328 2.9e-54 216.9 382 40.1
Sabra03G0162700 Salix brachista HOM05D006726 ORTHO05D008328 6.4e-54 215.7 365 40.5
Nitab4.5_0000775g0040 Nicotiana tabacum HOM05D006726 ORTHO05D008328 1.1e-53 214.9 365 40.0
Actinidia06849 Actinidia chinensis HOM05D006726 ORTHO05D008328 1.9e-53 214.2 371 41.2
Solyc01g005930.3 Solanum lycopersicum HOM05D006726 ORTHO05D008328 1.9e-53 214.2 365 39.5
TWI34G0208 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 1.9e-53 214.2 391 38.6
TWI34G0698 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 1.9e-53 214.2 391 38.6
PGSC0003DMG400032136 Solanum tuberosum HOM05D006726 ORTHO05D008328 3.2e-53 213.4 365 38.9
TPR.G24412 Trifolium pratense HOM05D006726 ORTHO05D008328 3.2e-53 213.4 367 40.9
PGR119G2317 Punica granatum HOM05D006726 ORTHO05D008328 4.2e-53 213.0 364 40.7
RcHm_v2.0_Chr5g0082841 Rosa chinensis HOM05D006726 ORTHO05D008328 4.2e-53 213.0 353 41.4
COL.COLO4_35015 Corchorus olitorius HOM05D006726 ORTHO05D008328 1.2e-52 211.5 370 40.0
Psat7g073840 Pisum sativum HOM05D006726 ORTHO05D008328 1.6e-52 211.1 359 40.4
CAN.G158.14 Capsicum annuum HOM05D006726 ORTHO05D008328 2.1e-52 210.7 364 39.6
CiPaw.13G175000 Carya illinoinensis HOM05D006726 ORTHO05D008328 2.1e-52 210.7 367 39.8
vmacro04222 Vaccinium macrocarpon HOM05D006726 ORTHO05D008328 2.7e-52 210.3 362 40.6
DCAR_026158 Daucus carota HOM05D006726 ORTHO05D008328 4.6e-52 209.5 358 41.1
MSTRG.18868 Avicennia marina HOM05D006726 ORTHO05D008328 6.0e-52 209.1 369 39.6
Lj4g0004177 Lotus japonicus HOM05D006726 ORTHO05D008328 1.3e-51 208.0 382 38.2
QL01p008136 Quercus lobata HOM05D006726 ORTHO05D008328 1.7e-51 207.6 370 38.9
Lsat_1_v5_gn_6_52180 Lactuca sativa HOM05D006726 ORTHO05D008328 3.9e-51 206.5 365 40.5
Sopen01g001940 Solanum pennellii HOM05D006726 ORTHO05D008328 6.6e-51 205.7 365 38.4
Ca_17954_v3 Cicer arietinum L. HOM05D006726 ORTHO05D008328 8.7e-51 205.3 369 38.2
Migut.D02543 Erythranthe guttata HOM05D006726 ORTHO05D008328 8.7e-51 205.3 367 38.4
Hund07578 Selenicereus undatus HOM05D006726 ORTHO05D008328 1.5e-50 204.5 369 38.8
Thecc.09G210400 Theobroma cacao HOM05D006726 ORTHO05D008328 3.3e-50 203.4 340 40.0
HPP92_006110 Vanilla planifolia HOM05D006726 ORTHO05D008328 4.3e-50 203.0 362 39.2
FAN21G0710 Fragaria x ananassa HOM05D006726 ORTHO05D008328 9.6e-50 201.8 351 40.2
CsaV3_1G043900 Cucumis sativus L. HOM05D006726 ORTHO05D008328 1.2e-49 201.4 369 37.9
Medtr8g085620 Medicago truncatula HOM05D006726 ORTHO05D008328 2.8e-49 200.3 361 37.7
ATR0001G014 Amborella trichopoda HOM05D006726 ORTHO05D008328 3.6e-49 199.9 368 39.7
Cpa.g.sc119.74 Carica papaya HOM05D006726 ORTHO05D008328 3.6e-49 199.9 300 42.0
FAN25G0869 Fragaria x ananassa HOM05D006726 ORTHO05D008328 3.6e-49 199.9 351 40.2
FAN11G1313 Fragaria x ananassa HOM05D006726 ORTHO05D008328 4.7e-49 199.5 352 39.8
FvH4_3g45230 Fragaria vesca HOM05D006726 ORTHO05D008328 8.1e-49 198.7 352 39.8
FAN16G2093 Fragaria x ananassa HOM05D006726 ORTHO05D008328 8.1e-49 198.7 352 39.8
Manes.03G084600 Manihot esculenta HOM05D006726 ORTHO05D008328 8.1e-49 198.7 379 38.5
Zm00001eb169450 Zea mays HOM05D006726 ORTHO05D008328 1.4e-48 198.0 383 36.6
MBI01_g14456_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 4.0e-48 196.4 358 39.4
Sed0027506 Sechium edule HOM05D006726 ORTHO05D008328 4.0e-48 196.4 368 37.8
Nn2g15797 Nelumbo nucifera HOM05D006726 ORTHO05D008328 5.3e-48 196.1 316 41.1
Sp1g40950 Schrenkiella parvula HOM05D006726 ORTHO05D008328 9.0e-48 195.3 399 37.6
Lj2C718T3 Lonicera japonica HOM05D006726 ORTHO05D008328 1.2e-47 194.9 300 44.3
ClCG03G012030 Citrullus lanatus HOM05D006726 ORTHO05D008328 2.0e-47 194.1 367 37.6
Nitab4.5_0001059g0100 Nicotiana tabacum HOM05D006726 ORTHO05D008328 2.6e-47 193.7 375 38.9
AT1G55280 Arabidopsis thaliana HOM05D006726 ORTHO05D008328 4.4e-47 193.0 367 38.7
A08p00750 Brassica napus HOM05D006726 ORTHO05D008328 1.3e-46 191.4 356 37.6
BraA08t32132Z Brassica rapa HOM05D006726 ORTHO05D008328 1.3e-46 191.4 356 37.6
THA.LOC104810333 Tarenaya hassleriana HOM05D006726 ORTHO05D008328 1.3e-46 191.4 386 38.3
PSO384G1418 Papaver somniferum HOM05D006726 ORTHO05D008328 1.7e-46 191.0 365 39.2
BcaC01g01509 Brassica carinata HOM05D006726 ORTHO05D008328 2.9e-46 190.3 364 38.7
MELO3C015045.2 Cucumis melo HOM05D006726 ORTHO05D008328 6.4e-46 189.1 369 36.9
Thhalv10011547m.g Eutrema salsugineum HOM05D006726 ORTHO05D008328 1.9e-45 187.6 368 38.9
Eucgr.J01803 Eucalyptus grandis HOM05D006726 ORTHO05D008328 5.4e-45 186.0 300 41.3
Peaxi162Scf00100g00318 Petunia axillaris HOM05D006726 ORTHO05D008328 7.1e-45 185.7 355 38.0
SalBow6G1149 Salvia bowleyana HOM05D006726 ORTHO05D008328 9.3e-45 185.3 358 37.7
CSS0004752 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.2e-44 184.9 358 38.5
EL10Ac4g10360 Beta vulgaris HOM05D006726 ORTHO05D008328 3.5e-44 183.3 370 35.7
C03p92580 Brassica napus HOM05D006726 ORTHO05D008328 4.6e-44 183.0 365 37.8
AL1G63330 Arabidopsis lyrata HOM05D006726 ORTHO05D008328 1.0e-43 181.8 369 36.3
Sc09g0000200 Simmondsia chinensis HOM05D006726 ORTHO05D008328 1.0e-43 181.8 315 39.7
BolC3t21572H Brassica oleracea HOM05D006726 ORTHO05D008328 1.3e-43 181.4 365 37.5
Os11g0491400 Oryza sativa ssp. japonica HOM05D006726 ORTHO05D008328 1.3e-43 181.4 389 33.7
CARHR044940 Cardamine hirsuta HOM05D006726 ORTHO05D008328 1.7e-43 181.0 366 36.1
AUR62019186 Chenopodium quinoa HOM05D006726 ORTHO05D008328 2.5e-42 177.2 366 37.7
SGA_v2.0_scaffold6G03420 Striga asiatica HOM05D006726 ORTHO05D008328 3.6e-41 173.3 371 35.3
BcaB04g16967 Brassica carinata HOM05D006726 ORTHO05D008328 5.8e-39 166.0 291 39.5
Carub.0001s4379 Capsella rubella HOM05D006726 ORTHO05D008328 7.6e-39 165.6 299 38.8
MBI01_g46956_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 7.4e-34 149.1 198 44.4
Hma1.2p1_0843F.1_g227250 Hydrangea macrophylla HOM05D006726 ORTHO05D008328 3.1e-32 143.7 239 43.9
Actinidia16259 Actinidia chinensis HOM05D006726 ORTHO05D008328 4.0e-32 143.3 298 39.6
AUR62000016 Chenopodium quinoa HOM05D001875 ORTHO05D008328 3.2e-29 133.7 254 38.2
CSS0003958 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.1e-28 131.0 234 40.6
CSS0031538 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 2.1e-28 131.0 234 40.6
Aa31LG10G1050 Aethionema arabicum HOM05D006726 ORTHO05D008328 1.6e-25 121.3 226 38.9
Pp3c13_13690 Physcomitrium patens HOM05D006726 ORTHO05D008328 6.5e-22 109.4 376 29.0
unitig_749.g13586 Utricularia gibba HOM05D006726 ORTHO05D008328 6.3e-17 92.8 181 39.2
Mapoly0036s0044 Marchantia polymorpha HOM05D006726 ORTHO05D008328 3.1e-16 90.5 340 28.2
BcaC01g01511 Brassica carinata HOM05D006726 ORTHO05D008328 3.8e-14 83.6 153 39.9
CSS0027573 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.1e-13 82.0 226 33.6
SMO268G0018 Selaginella moellendorffii HOM05D006726 ORTHO05D008328 1.9e-13 81.3 253 31.2
MBI01_g46957_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 4.6e-12 76.6 127 40.9
AagrBONN_evm.TU.Sc2ySwM_368.685 Anthoceros agrestis HOM05D006726 ORTHO05D008328 1.0e-11 75.5 351 27.6
C03p92600 Brassica napus HOM05D006726 ORTHO05D008328 2.3e-11 74.3 143 34.3
CSS0014249 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 4.1e-08 63.5 126 35.7
CSS0044208 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 4.1e-08 63.5 126 35.7
unitig_749.g13585 Utricularia gibba HOM05D006726 ORTHO05D008328 1.3e-06 58.5 137 31.4


User provided reference genes

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