Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2673 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 3.7e-188 661.4 334 100.0
CDE07G0532 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 6.9e-118 427.9 257 86.8
Nn6g34090 Nelumbo nucifera HOM05D005574 ORTHO05D007102 2.4e-54 216.9 260 47.7
TWI53G0495 Tripterygium wilfordii HOM05D005574 ORTHO05D007102 1.9e-51 207.2 243 48.1
Dinv44545 Davidia involucrata HOM05D005574 ORTHO05D007102 1.2e-50 204.5 265 47.5
CSS0019466 Camellia sinensis var. sinensis HOM05D005574 ORTHO05D007102 1.2e-48 198.0 241 48.5
TAR362G0087 Trochodendron aralioides HOM05D005574 ORTHO05D007102 1.7e-47 194.1 264 44.7
CiPaw.02G098000 Carya illinoinensis HOM05D005574 ORTHO05D007102 4.9e-47 192.6 264 45.8
GSVIVG01017997001 Vitis vinifera HOM05D005574 ORTHO05D007102 1.4e-46 191.0 240 45.4
Thecc.04G192400 Theobroma cacao HOM05D005574 ORTHO05D007102 2.4e-46 190.3 239 45.2
Glyma.20G147200 Glycine max HOM05D005574 ORTHO05D007102 3.2e-46 189.9 260 42.7
Atru.chr4.2447 Acer truncatum HOM05D005574 ORTHO05D007102 7.1e-46 188.7 269 42.8
Cfa015664 Carpinus fangiana HOM05D005574 ORTHO05D007102 7.1e-46 188.7 266 45.1
Glyma.10G247300 Glycine max HOM05D005574 ORTHO05D007102 9.3e-46 188.3 260 41.9
Gorai.011G151700 Gossypium raimondii HOM05D005574 ORTHO05D007102 1.2e-45 188.0 251 43.8
PSO210G4004 Papaver somniferum HOM05D005574 ORTHO05D007102 4.6e-45 186.0 248 43.5
Gohir.D10G136700 Gossypium hirsutum HOM05D005574 ORTHO05D007102 1.0e-44 184.9 250 43.6
Ciclev10005241m.g Citrus clementina HOM05D005574 ORTHO05D007102 1.3e-44 184.5 248 43.1
Potri.010G086100 Populus trichocarpa HOM05D005574 ORTHO05D007102 1.3e-44 184.5 250 43.6
COL.COLO4_05700 Corchorus olitorius HOM05D005574 ORTHO05D007102 1.7e-44 184.1 242 44.6
Duzib268G0255 Durio zibethinus HOM05D005574 ORTHO05D007102 5.1e-44 182.6 260 41.5
QL06p002087 Quercus lobata HOM05D005574 ORTHO05D007102 5.1e-44 182.6 253 43.9
Hma1.2p1_0602F.1_g187410 Hydrangea macrophylla HOM05D005574 ORTHO05D007102 1.1e-43 181.4 268 42.5
Gohir.A10G129500 Gossypium hirsutum HOM05D005574 ORTHO05D007102 2.5e-43 180.3 253 43.9
Phvul.007G058100 Phaseolus vulgaris HOM05D005574 ORTHO05D007102 2.5e-43 180.3 250 41.6
Aqoxy2G03411 Aquilegia oxysepala HOM05D005574 ORTHO05D007102 5.6e-43 179.1 266 43.6
TPR.G5479 Trifolium pratense HOM05D005574 ORTHO05D007102 5.6e-43 179.1 249 41.8
MD16G1195700 Malus domestica HOM05D005574 ORTHO05D007102 7.3e-43 178.7 244 42.2
CsaV3_3G013190 Cucumis sativus L. HOM05D005574 ORTHO05D007102 1.3e-42 177.9 267 40.1
Potri.008G154400 Populus trichocarpa HOM05D005574 ORTHO05D007102 1.3e-42 177.9 249 42.6
Rhsim04G0201500 Rhododendron simsii HOM05D005574 ORTHO05D007102 1.3e-42 177.9 256 43.0
Peaxi162Scf00092g00614 Petunia axillaris HOM05D005574 ORTHO05D007102 1.6e-42 177.6 270 42.2
MSTRG.9977 Avicennia marina HOM05D005574 ORTHO05D007102 2.1e-42 177.2 262 42.7
Cc03_g03930 Coffea canephora HOM05D005574 ORTHO05D007102 2.1e-42 177.2 265 42.3
MSTRG.4036 Avicennia marina HOM05D005574 ORTHO05D007102 2.8e-42 176.8 262 42.7
Prupe.1G015700 Prunus persica HOM05D005574 ORTHO05D007102 3.6e-42 176.4 242 41.7
Haze_00883 Corylus avellana HOM05D005574 ORTHO05D007102 6.2e-42 175.6 268 42.5
FAN02G2947 Fragaria x ananassa HOM05D005574 ORTHO05D007102 6.2e-42 175.6 257 42.0
Sabra10G0057600 Salix brachista HOM05D005574 ORTHO05D007102 8.1e-42 175.3 240 44.2
Sed0003604 Sechium edule HOM05D005574 ORTHO05D007102 8.1e-42 175.3 244 44.7
Nitab4.5_0001920g0060 Nicotiana tabacum HOM05D005574 ORTHO05D007102 1.4e-41 174.5 257 43.6
Medtr1g103560 Medicago truncatula HOM05D005574 ORTHO05D007102 2.4e-41 173.7 239 43.1
Hund12118 Selenicereus undatus HOM05D005574 ORTHO05D007102 3.1e-41 173.3 265 41.5
Migut.G00347 Erythranthe guttata HOM05D005574 ORTHO05D007102 4.0e-41 172.9 271 42.1
arahy.Tifrunner.gnm1.ann1.PUQJ4X Arachis hypogaea HOM05D005574 ORTHO05D007102 5.3e-41 172.6 245 41.2
RcHm_v2.0_Chr4g0415861 Rosa chinensis HOM05D005574 ORTHO05D007102 5.3e-41 172.6 250 41.2
VMungo0720G0566 Vigna mungo HOM05D005574 ORTHO05D007102 5.3e-41 172.6 250 41.6
Ah.13g071610 Amaranthus hybridus HOM05D005574 ORTHO05D007102 6.9e-41 172.2 246 41.5
AUR62033680 Chenopodium quinoa HOM05D005574 ORTHO05D007102 6.9e-41 172.2 263 40.7
AUR62034712 Chenopodium quinoa HOM05D005574 ORTHO05D007102 6.9e-41 172.2 263 41.1
Nitab4.5_0004135g0020 Nicotiana tabacum HOM05D005574 ORTHO05D007102 6.9e-41 172.2 278 41.4
ClCG05G005090 Citrullus lanatus HOM05D005574 ORTHO05D007102 1.2e-40 171.4 241 41.5
MD13G1194900 Malus domestica HOM05D005574 ORTHO05D007102 1.2e-40 171.4 244 42.2
MELO3C006525.2 Cucumis melo HOM05D005574 ORTHO05D007102 1.5e-40 171.0 268 38.8
Oeu058969.1 Olea europaea HOM05D005574 ORTHO05D007102 2.0e-40 170.6 278 40.3
arahy.Tifrunner.gnm1.ann1.R5YE9W Arachis hypogaea HOM05D005574 ORTHO05D007102 2.6e-40 170.2 242 40.9
EL10Ac3g06494 Beta vulgaris HOM05D005574 ORTHO05D007102 4.5e-40 169.5 260 41.5
FvH4_4g16270 Fragaria vesca HOM05D005574 ORTHO05D007102 4.5e-40 169.5 264 39.8
FAN12G0525 Fragaria x ananassa HOM05D005574 ORTHO05D007102 4.5e-40 169.5 264 39.8
FAN12G2145 Fragaria x ananassa HOM05D005574 ORTHO05D007102 4.5e-40 169.5 264 39.8
FAN12G2997 Fragaria x ananassa HOM05D005574 ORTHO05D007102 4.5e-40 169.5 264 39.8
Solyc09g082180.3 Solanum lycopersicum HOM05D005574 ORTHO05D007102 4.5e-40 169.5 261 41.4
FAN07G2976 Fragaria x ananassa HOM05D005574 ORTHO05D007102 5.8e-40 169.1 257 40.1
Sopen09g031060 Solanum pennellii HOM05D005574 ORTHO05D007102 5.8e-40 169.1 261 41.4
Actinidia23520 Actinidia chinensis HOM05D005574 ORTHO05D007102 1.7e-39 167.5 235 44.7
PSO761G0453 Papaver somniferum HOM05D005574 ORTHO05D007102 4.9e-39 166.0 235 42.6
CANSAT78G2217 Cannabis sativa HOM05D005574 ORTHO05D007102 6.4e-39 165.6 274 42.0
BcaC05g24386 Brassica carinata HOM05D005574 ORTHO05D007102 8.4e-39 165.2 253 39.1
C05p03780 Brassica napus HOM05D005574 ORTHO05D007102 8.4e-39 165.2 253 39.1
BolC5t29155H Brassica oleracea HOM05D005574 ORTHO05D007102 8.4e-39 165.2 253 39.1
SalBow2G1029 Salvia bowleyana HOM05D005574 ORTHO05D007102 8.4e-39 165.2 263 40.3
Sed0027704 Sechium edule HOM05D005574 ORTHO05D007102 8.4e-39 165.2 243 41.2
DCAR_030644 Daucus carota HOM05D005574 ORTHO05D007102 1.9e-38 164.1 262 39.3
SGA_v2.0_scaffold257G45710 Striga asiatica HOM05D005574 ORTHO05D007102 3.2e-38 163.3 266 38.7
AL1G15280 Arabidopsis lyrata HOM05D005574 ORTHO05D007102 9.3e-38 161.8 251 39.4
Psat6g206920 Pisum sativum HOM05D005574 ORTHO05D007102 1.6e-37 161.0 255 40.0
Eucgr.B01081 Eucalyptus grandis HOM05D005574 ORTHO05D007102 2.1e-37 160.6 226 42.5
Sp1g04310 Schrenkiella parvula HOM05D005574 ORTHO05D007102 7.9e-37 158.7 252 38.9
THA.LOC104800960 Tarenaya hassleriana HOM05D005574 ORTHO05D007102 3.0e-36 156.8 261 38.7
Thhalv10002568m.g Eutrema salsugineum HOM05D005574 ORTHO05D007102 5.1e-36 156.0 249 39.0
A10p04140 Brassica napus HOM05D005574 ORTHO05D007102 8.7e-36 155.2 238 38.7
BraA10t42684Z Brassica rapa HOM05D005574 ORTHO05D007102 8.7e-36 155.2 238 38.7
Manes.03G177100 Manihot esculenta HOM05D005574 ORTHO05D007102 1.5e-35 154.5 251 41.0
Ca_10888_v3 Cicer arietinum L. HOM05D005574 ORTHO05D007102 1.9e-35 154.1 244 39.3
Lj5g0023935 Lotus japonicus HOM05D005574 ORTHO05D007102 3.3e-35 153.3 250 40.0
SEGI_38250 Sequoiadendron giganteum HOM05D005574 ORTHO05D007102 1.6e-34 151.0 257 33.1
BcaB02g06860 Brassica carinata HOM05D005574 ORTHO05D007102 2.4e-33 147.1 251 37.8
Dinv14005 Davidia involucrata HOM05D005574 ORTHO05D007102 6.9e-33 145.6 239 38.9
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 1.2e-32 144.8 244 39.3
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 1.2e-32 144.8 255 39.2
CARHR004930 Cardamine hirsuta HOM05D005574 ORTHO05D007102 2.6e-32 143.7 257 35.0
Carub.0001s0477 Capsella rubella HOM05D005574 ORTHO05D007102 7.6e-32 142.1 252 36.1
ECA234G0493 Erigeron canadensis HOM05D005574 ORTHO05D007102 9.9e-32 141.7 268 34.0
Lalb_Chr02g0140631 Lupinus albus HOM05D005574 ORTHO05D007102 2.9e-31 140.2 236 38.6
HPP92_009613 Vanilla planifolia HOM05D005574 ORTHO05D007102 3.8e-31 139.8 259 39.0
ATR0697G187 Amborella trichopoda HOM05D005574 ORTHO05D007102 4.9e-31 139.4 237 39.2
Lsat_1_v5_gn_5_104360 Lactuca sativa HOM05D005574 ORTHO05D007102 1.3e-28 131.3 261 35.6
AT1G05440 Arabidopsis thaliana HOM05D005574 ORTHO05D007102 1.4e-25 121.3 251 33.5
MBI15_g31435_MAGBIO Magnolia biondii HOM05D005574 ORTHO05D007102 2.4e-25 120.6 193 37.8
HanXRQChr10g0294751 Helianthus annuus HOM05D005574 ORTHO05D007102 9.0e-25 118.6 246 35.0
PGR142G0953 Punica granatum HOM05D005574 ORTHO05D007102 1.3e-23 114.8 256 35.9
Actinidia40140 Actinidia chinensis HOM05D005574 ORTHO05D007102 2.9e-23 113.6 98 57.1
CAN.G2204.4 Capsicum annuum HOM05D005574 ORTHO05D007102 2.9e-23 113.6 229 33.6
Os03g0747100 Oryza sativa ssp. japonica HOM05D005574 ORTHO05D007102 3.8e-23 113.2 252 33.7
Duzib151G0572 Durio zibethinus HOM05D005574 ORTHO05D007102 6.5e-23 112.5 114 50.0
Zm00001eb057090 Zea mays HOM05D005574 ORTHO05D007102 8.4e-23 112.1 246 32.9
AagrBONN_evm.TU.Sc2ySwM_117.3111 Anthoceros agrestis HOM05D005574 ORTHO05D007102 1.9e-19 100.9 249 28.9
CAN.G2204.2 Capsicum annuum HOM05D000340 ORTHO05D007102 7.4e-19 99.0 103 43.7
SMO174G0025 Selaginella moellendorffii HOM05D005574 ORTHO05D007102 1.6e-18 97.8 252 29.4
unitig_32.g11728 Utricularia gibba HOM05D005574 ORTHO05D007102 1.5e-16 91.3 166 35.5
BolC1t04542H Brassica oleracea HOM05D005574 ORTHO05D007102 9.3e-14 82.0 153 32.0
BolC5t33236H Brassica oleracea HOM05D005574 ORTHO05D007102 9.3e-14 82.0 153 32.0
BraA09t41109Z Brassica rapa HOM05D005574 ORTHO05D007102 1.6e-13 81.3 85 47.1
A02p27770 Brassica napus HOM05D005574 ORTHO05D007102 2.7e-13 80.5 85 45.9
BraA02t07818Z Brassica rapa HOM05D005574 ORTHO05D007102 2.7e-13 80.5 85 45.9
BcaC09g49493 Brassica carinata HOM05D005574 ORTHO05D007102 3.6e-13 80.1 157 29.9
BraA07t27929Z Brassica rapa HOM05D005574 ORTHO05D007102 3.6e-13 80.1 85 45.9
C01p35960 Brassica napus HOM05D005574 ORTHO05D007102 4.6e-13 79.7 85 47.1
A03p47670 Brassica napus HOM05D005574 ORTHO05D007102 6.1e-13 79.3 85 45.9
BraA09t37853Z Brassica rapa HOM05D005574 ORTHO05D007102 6.1e-13 79.3 85 45.9
A09p57160 Brassica napus HOM05D005574 ORTHO05D007102 1.3e-12 78.2 64 54.7
BolC3t13081H Brassica oleracea HOM05D005574 ORTHO05D007102 1.3e-12 78.2 85 45.9
ECA234G4095 Erigeron canadensis HOM05D005574 ORTHO05D007102 5.1e-12 76.3 97 45.4
C03p05690 Brassica napus HOM05D005574 ORTHO05D022054 2.2e-10 70.9 57 57.9
BcaC09g48798 Brassica carinata HOM05D005574 ORTHO05D007102 5.9e-08 62.8 72 41.7
BolC1t03554H Brassica oleracea HOM05D005574 ORTHO05D022054 1.0e-07 62.0 49 61.2
Cpa.g.sc58.90 Carica papaya HOM05D005574 ORTHO05D007102 1.9e-06 57.8 36 72.2


User provided reference genes

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