Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2636 Ceratophyllum demersum HOM05D005798 ORTHO05D007269 1.3e-204 716.1 352 100.0
Sabra16G0226600 Salix brachista HOM05D005798 ORTHO05D007269 3.4e-115 419.1 358 57.3
Gohir.D10G254600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 4.4e-115 418.7 352 58.5
MBI05_g22048_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 5.8e-115 418.3 348 58.0
Potri.001G346900 Populus trichocarpa HOM05D005798 ORTHO05D007269 1.3e-114 417.2 358 57.3
Nitab4.5_0013532g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 2.2e-114 416.4 358 56.4
CiPaw.13G020800 Carya illinoinensis HOM05D005798 ORTHO05D007269 2.9e-114 416.0 360 55.8
Gorai.011G295600 Gossypium raimondii HOM05D005798 ORTHO05D007269 2.9e-114 416.0 352 58.2
CSS0042045 Camellia sinensis var. sinensis HOM05D005798 ORTHO05D007269 3.8e-114 415.6 353 58.1
QL04p025438 Quercus lobata HOM05D005798 ORTHO05D007269 4.9e-114 415.2 359 56.8
Gohir.A10G242600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 1.9e-113 413.3 351 57.5
Atru.chr5.52 Acer truncatum HOM05D005798 ORTHO05D007269 2.4e-113 412.9 361 55.4
Atru.chr5.24 Acer truncatum HOM05D005798 ORTHO05D007269 5.4e-113 411.8 361 55.4
Nn2g10726 Nelumbo nucifera HOM05D005798 ORTHO05D007269 7.1e-113 411.4 354 55.6
Duzib128G1323 Durio zibethinus HOM05D005798 ORTHO05D007269 9.3e-113 411.0 360 55.8
Peaxi162Scf01124g00121 Petunia axillaris HOM05D005798 ORTHO05D007269 2.7e-112 409.5 358 55.9
Prupe.2G112300 Prunus persica HOM05D005798 ORTHO05D007269 6.0e-112 408.3 362 56.1
CAN.G1480.2 Capsicum annuum HOM05D005798 ORTHO05D007269 7.8e-112 407.9 358 56.1
Nitab4.5_0009219g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 1.0e-111 407.5 358 55.6
MD07G1086000 Malus domestica HOM05D005798 ORTHO05D007269 2.3e-111 406.4 362 57.2
Sopen01g035220 Solanum pennellii HOM05D005798 ORTHO05D007269 3.0e-111 406.0 358 55.3
PGSC0003DMG400001703 Solanum tuberosum HOM05D005798 ORTHO05D007269 3.0e-111 406.0 358 56.1
Lj1g0019008 Lotus japonicus HOM05D005798 ORTHO05D007269 5.1e-111 405.2 359 54.3
Manes.05G060100 Manihot esculenta HOM05D005798 ORTHO05D007269 6.6e-111 404.8 362 56.4
Thecc.10G001400 Theobroma cacao HOM05D005798 ORTHO05D007269 8.7e-111 404.4 360 54.2
FAN23G2651 Fragaria x ananassa HOM05D005798 ORTHO05D007269 1.1e-110 404.1 363 55.4
Solyc01g088390.3 Solanum lycopersicum HOM05D005798 ORTHO05D007269 1.5e-110 403.7 358 55.3
Medtr0103s0100 Medicago truncatula HOM05D005798 ORTHO05D007269 1.9e-110 403.3 360 52.5
AUR62031252 Chenopodium quinoa HOM05D005798 ORTHO05D007269 2.5e-110 402.9 358 54.7
MD02G1227400 Malus domestica HOM05D005798 ORTHO05D007269 4.3e-110 402.1 361 56.0
AUR62027448 Chenopodium quinoa HOM05D005798 ORTHO05D007269 5.6e-110 401.7 358 54.5
CANSAT21G0894 Cannabis sativa HOM05D005798 ORTHO05D007269 7.3e-110 401.4 360 55.0
FAN26G0835 Fragaria x ananassa HOM05D005798 ORTHO05D007269 7.3e-110 401.4 362 55.0
Phvul.005G016200 Phaseolus vulgaris HOM05D005798 ORTHO05D007269 9.6e-110 401.0 354 56.5
Lalb_Chr19g0126311 Lupinus albus HOM05D005798 ORTHO05D007269 1.6e-109 400.2 356 55.6
RcHm_v2.0_Chr1g0343251 Rosa chinensis HOM05D005798 ORTHO05D007269 2.8e-109 399.4 363 56.2
Psat3g172680 Pisum sativum HOM05D005798 ORTHO05D007269 3.6e-109 399.1 360 52.5
TWI59G0898 Tripterygium wilfordii HOM05D005798 ORTHO05D007269 4.8e-109 398.7 357 54.9
arahy.Tifrunner.gnm1.ann1.1MA0KJ Arachis hypogaea HOM05D005798 ORTHO05D007269 6.2e-109 398.3 353 55.2
arahy.Tifrunner.gnm1.ann1.6FN2NF Arachis hypogaea HOM05D005798 ORTHO05D007269 1.4e-108 397.1 353 55.2
ECA234G4178 Erigeron canadensis HOM05D005798 ORTHO05D007269 1.4e-108 397.1 367 54.0
FvH4_1g25731 Fragaria vesca HOM05D005798 ORTHO05D007269 1.4e-108 397.1 362 54.7
PSO782G4885 Papaver somniferum HOM05D005798 ORTHO05D007269 1.4e-108 397.1 359 53.2
PSO017G1219 Papaver somniferum HOM05D005798 ORTHO05D007269 1.8e-108 396.7 359 53.2
PGR004G0434 Punica granatum HOM05D005798 ORTHO05D007269 1.8e-108 396.7 358 54.7
vmacro21093 Vaccinium macrocarpon HOM05D005798 ORTHO05D007269 1.8e-108 396.7 353 55.8
Ciclev10020482m.g Citrus clementina HOM05D005798 ORTHO05D007269 2.4e-108 396.4 361 54.0
ClCG05G002770 Citrullus lanatus HOM05D005798 ORTHO05D007269 4.0e-108 395.6 353 55.2
Sc26g0001830 Simmondsia chinensis HOM05D005798 ORTHO05D007269 2.0e-107 393.3 357 53.5
MELO3C006251.2 Cucumis melo HOM05D005798 ORTHO05D007269 2.6e-107 392.9 354 54.0
Glyma.06G310400 Glycine max HOM05D005798 ORTHO05D007269 2.6e-107 392.9 358 53.9
FAN28G0191 Fragaria x ananassa HOM05D005798 ORTHO05D007269 4.4e-107 392.1 362 53.6
Zm00001eb112030 Zea mays HOM05D005798 ORTHO05D007269 4.4e-107 392.1 355 55.5
PGR004G1878 Punica granatum HOM05D005798 ORTHO05D007269 5.8e-107 391.7 360 54.4
MSTRG.20650 Avicennia marina HOM05D005798 ORTHO05D007269 7.6e-107 391.3 356 55.3
Eucgr.D01150 Eucalyptus grandis HOM05D005798 ORTHO05D007269 7.6e-107 391.3 357 53.8
Hund17139 Selenicereus undatus HOM05D005798 ORTHO05D007269 9.9e-107 391.0 357 53.2
PSO063G7295 Papaver somniferum HOM05D005798 ORTHO05D007269 2.2e-106 389.8 370 52.7
Cc02_g25760 Coffea canephora HOM05D005798 ORTHO05D007269 2.9e-106 389.4 363 54.3
Ca_03850_v3 Cicer arietinum L. HOM05D005798 ORTHO05D007269 6.4e-106 388.3 358 53.9
CsaV3_3G010280 Cucumis sativus L. HOM05D005798 ORTHO05D007269 1.1e-105 387.5 354 53.7
THA.LOC104817171 Tarenaya hassleriana HOM05D005798 ORTHO05D007269 1.1e-105 387.5 358 53.4
Sed0012756 Sechium edule HOM05D005798 ORTHO05D007269 2.4e-105 386.3 354 53.7
EL10Ac8g19272 Beta vulgaris HOM05D005798 ORTHO05D007269 9.3e-105 384.4 359 52.6
HanXRQChr16g0519531 Helianthus annuus HOM05D005798 ORTHO05D007269 1.6e-104 383.6 344 55.8
Glyma.04G128400 Glycine max HOM05D005798 ORTHO05D007269 3.5e-104 382.5 359 52.9
HPP92_011679 Vanilla planifolia HOM05D005798 ORTHO05D007269 3.5e-104 382.5 353 56.1
VMungo1080G0989 Vigna mungo HOM05D005798 ORTHO05D007269 3.5e-104 382.5 357 53.5
Oeu024375.1 Olea europaea HOM05D005798 ORTHO05D007269 4.6e-104 382.1 337 56.1
Oeu024376.1 Olea europaea HOM05D005798 ORTHO05D007269 4.6e-104 382.1 337 56.1
Os05g0119600 Oryza sativa ssp. japonica HOM05D005798 ORTHO05D007269 1.0e-103 380.9 341 54.5
CARHR139800 Cardamine hirsuta HOM05D005798 ORTHO05D007269 3.4e-99 365.9 346 51.7
Migut.B01472 Erythranthe guttata HOM05D005798 ORTHO05D007269 3.4e-99 365.9 358 52.5
unitig_52.g17377 Utricularia gibba HOM05D005798 ORTHO05D007269 5.8e-99 365.2 352 51.4
Aa31LG1G26140 Aethionema arabicum HOM05D005798 ORTHO05D007269 9.9e-99 364.4 357 51.5
AL4G43620 Arabidopsis lyrata HOM05D005798 ORTHO05D007269 2.2e-98 363.2 356 51.1
AT2G44580 Arabidopsis thaliana HOM05D005798 ORTHO05D007269 1.4e-97 360.5 361 51.2
SEGI_02869 Sequoiadendron giganteum HOM05D005798 ORTHO05D007269 1.9e-97 360.1 355 48.5
Carub.0004s2713 Capsella rubella HOM05D005798 ORTHO05D007269 2.4e-97 359.8 357 51.3
Thhalv10001723m.g Eutrema salsugineum HOM05D005798 ORTHO05D007269 2.1e-96 356.7 358 51.7
Ah.14g086050 Amaranthus hybridus HOM05D005798 ORTHO05D007269 3.0e-95 352.8 335 50.7
BolC4t22185H Brassica oleracea HOM05D005798 ORTHO05D007269 8.7e-95 351.3 350 50.0
BcaC02g12292 Brassica carinata HOM05D005798 ORTHO05D007269 1.1e-94 350.9 351 50.1
C04p05550 Brassica napus HOM05D005798 ORTHO05D007269 1.1e-94 350.9 351 50.1
Sp4g26670 Schrenkiella parvula HOM05D005798 ORTHO05D007269 1.9e-94 350.1 357 50.1
BcaB02g08835 Brassica carinata HOM05D005798 ORTHO05D007269 2.5e-94 349.7 353 49.6
BraA05t19450Z Brassica rapa HOM05D005798 ORTHO05D007269 2.5e-94 349.7 351 50.1
A05p04740 Brassica napus HOM05D005798 ORTHO05D007269 2.1e-93 346.7 351 49.3
Lj7C553T5 Lonicera japonica HOM05D005798 ORTHO05D007269 6.2e-93 345.1 357 50.4
TPR.G30814 Trifolium pratense HOM05D005798 ORTHO05D007269 2.4e-92 343.2 313 53.7
Actinidia33294 Actinidia chinensis HOM05D005798 ORTHO05D007269 4.5e-91 339.0 356 50.3
SGA_v2.0_scaffold17G08178 Striga asiatica HOM05D005798 ORTHO05D007269 1.6e-88 330.5 340 48.8
ATR0585G014 Amborella trichopoda HOM05D005798 ORTHO05D007269 4.2e-81 305.8 353 46.5
COL.COLO4_19318 Corchorus olitorius HOM05D005798 ORTHO05D007269 1.6e-80 303.9 283 52.7
Nn1g00612 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.9e-78 297.0 246 56.1
Pp3c5_22720 Physcomitrium patens HOM05D005798 ORTHO05D007269 3.1e-76 289.7 355 42.5
Rhsim01G0145000 Rhododendron simsii HOM05D005798 ORTHO05D007269 3.1e-76 289.7 351 43.3
TAR375G0847 Trochodendron aralioides HOM05D005798 ORTHO05D007269 2.6e-75 286.6 254 57.5
Mapoly0001s0452 Marchantia polymorpha HOM05D005798 ORTHO05D007269 3.8e-74 282.7 362 41.7
Dinv43575 Davidia involucrata HOM05D005798 ORTHO05D007269 1.4e-73 280.8 263 55.5
AagrBONN_evm.TU.Sc2ySwM_344.2100 Anthoceros agrestis HOM05D005798 ORTHO05D007269 1.8e-68 263.8 346 40.8
Cpa.g.sc3387.1 Carica papaya HOM05D005798 ORTHO05D007269 2.5e-65 253.4 205 56.6
Nn1g07358 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.7e-53 214.2 185 59.5
GSVIVG01018417001 Vitis vinifera HOM05D005798 ORTHO05D007269 4.5e-51 206.1 161 57.8
Lsat_1_v5_gn_4_46040 Lactuca sativa HOM05D005798 ORTHO05D007269 6.3e-45 185.7 161 52.8
Haze_02923 Corylus avellana HOM05D005798 ORTHO05D007269 1.0e-42 178.3 183 52.5
Actinidia21608 Actinidia chinensis HOM05D005798 ORTHO05D007269 2.5e-41 173.7 130 58.5
GSVIVG01018418001 Vitis vinifera HOM05D005798 ORTHO05D007269 5.5e-41 172.6 150 60.0
Nn3g19112 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.6e-40 171.0 217 40.1
CBR_g39622 Chara braunii HOM05D000017 ORTHO05D000013 8.0e-40 168.7 425 26.6
Prupe.2G112500 Prunus persica HOM05D005798 ORTHO05D007269 6.8e-39 165.6 145 61.4
HanXRQChr12g0366931 Helianthus annuus HOM05D005798 ORTHO05D007269 2.2e-37 160.6 230 36.5
Nn1g07357 Nelumbo nucifera HOM05D005798 ORTHO05D007269 2.2e-37 160.6 133 51.1
CAN.G74.39 Capsicum annuum HOM05D005798 ORTHO05D007269 2.5e-33 147.1 141 55.3
Cre16.g684155 Chlamydomonas reinhardtii HOM05D005798 ORTHO05D007269 1.4e-31 141.4 356 27.5
Nn3g19416 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.8e-31 141.0 130 47.7
Prupe.2G112400 Prunus persica HOM05D005798 ORTHO05D007269 8.9e-31 138.7 180 42.8
Atru.chr5.133 Acer truncatum HOM05D005798 ORTHO05D007269 1.7e-29 134.4 156 42.9
Peaxi162Scf00417g00029 Petunia axillaris HOM05D005798 ORTHO05D007269 4.9e-29 132.9 201 37.8
Nn3g19415 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.4e-28 131.3 86 69.8
PRCOL_00005399 Prasinoderma coloniale HOM05D005798 ORTHO05D007269 2.7e-27 127.1 326 28.2
Dinv43574 Davidia involucrata HOM05D005798 ORTHO05D007269 4.9e-21 106.3 79 62.0
HanXRQChr07g0198081 Helianthus annuus HOM05D005798 ORTHO05D007269 1.9e-20 104.4 220 29.5
CAN.G195.32 Capsicum annuum HOM05D005798 ORTHO05D007269 4.1e-20 103.2 141 36.9
Atru.chr5.134 Acer truncatum HOM05D005798 ORTHO05D007269 3.5e-19 100.1 63 66.7
EL10Ac6g13432 Beta vulgaris HOM05D005798 ORTHO05D007269 2.8e-16 90.5 97 42.3
MBI14_g08084_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 2.2e-13 80.9 76 51.3
CAN.G74.38 Capsicum annuum HOM05D005798 ORTHO05D007269 6.4e-13 79.3 63 61.9
HanXRQChr11g0349311 Helianthus annuus HOM05D000428 ORTHO05D011602 2.1e-08 64.3 96 41.7
TAR375G0441 Trochodendron aralioides HOM05D005798 ORTHO05D007269 8.1e-08 62.4 54 50.0
CAN.G195.33 Capsicum annuum HOM05D005798 ORTHO05D007269 2.0e-06 57.8 70 45.7


User provided reference genes

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