Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2625 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 9.5e-152 540.0 253 100.0
CDE08G1689 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 2.5e-144 515.4 253 94.9
TAR381G0495 Trochodendron aralioides HOM05D006006 ORTHO05D007566 1.5e-117 426.4 250 77.2
Nn1g06190 Nelumbo nucifera HOM05D006006 ORTHO05D007566 5.8e-117 424.5 250 78.0
Nn5g28652 Nelumbo nucifera HOM05D006006 ORTHO05D007566 5.8e-117 424.5 250 77.2
MBI03_g11319_MAGBIO Magnolia biondii HOM05D006006 ORTHO05D007566 2.2e-116 422.5 252 76.2
Ca_12665_v3 Cicer arietinum L. HOM05D006006 ORTHO05D007566 4.9e-116 421.4 243 78.2
THA.LOC104813696 Tarenaya hassleriana HOM05D006006 ORTHO05D007566 4.9e-116 421.4 249 76.7
TPR.G33300 Trifolium pratense HOM05D006006 ORTHO05D007566 1.4e-115 419.9 243 77.8
GSVIVG01010048001 Vitis vinifera HOM05D006006 ORTHO05D007566 3.2e-115 418.7 250 74.8
Glyma.13G039000 Glycine max HOM05D006006 ORTHO05D007566 4.2e-115 418.3 244 77.5
CiPaw.15G020800 Carya illinoinensis HOM05D006006 ORTHO05D007566 5.4e-115 417.9 244 76.6
Glyma.14G123000 Glycine max HOM05D006006 ORTHO05D007566 5.4e-115 417.9 244 77.0
Medtr1g029000 Medicago truncatula HOM05D006006 ORTHO05D007566 5.4e-115 417.9 249 76.3
arahy.Tifrunner.gnm1.ann1.D9Y8GI Arachis hypogaea HOM05D006006 ORTHO05D007566 1.2e-114 416.8 246 74.8
arahy.Tifrunner.gnm1.ann1.T5RWDG Arachis hypogaea HOM05D006006 ORTHO05D007566 1.6e-114 416.4 246 74.4
Thecc.08G145800 Theobroma cacao HOM05D006006 ORTHO05D007566 1.6e-114 416.4 244 76.6
Psat0s5561g0040 Pisum sativum HOM05D006006 ORTHO05D007566 4.6e-114 414.8 243 76.5
Lj7A365T41 Lonicera japonica HOM05D006006 ORTHO05D007566 7.9e-114 414.1 251 75.3
Lalb_Chr04g0263651 Lupinus albus HOM05D006006 ORTHO05D007566 1.0e-113 413.7 250 74.8
Cpa.g.sc49.54 Carica papaya HOM05D006006 ORTHO05D007566 1.8e-113 412.9 250 73.6
Solyc06g060460.3 Solanum lycopersicum HOM05D006006 ORTHO05D007566 1.8e-113 412.9 249 75.5
Aqoxy6G00385 Aquilegia oxysepala HOM05D006006 ORTHO05D007566 2.3e-113 412.5 251 74.5
Sopen06g020580 Solanum pennellii HOM05D006006 ORTHO05D007566 2.3e-113 412.5 249 75.1
FvH4_2g14460 Fragaria vesca HOM05D006006 ORTHO05D007566 3.9e-113 411.8 244 77.5
Ciclev10001700m.g Citrus clementina HOM05D006006 ORTHO05D007566 6.7e-113 411.0 250 73.6
FAN15G3392 Fragaria x ananassa HOM05D006006 ORTHO05D007566 6.7e-113 411.0 248 75.8
Lj1g0023019 Lotus japonicus HOM05D006006 ORTHO05D007566 6.7e-113 411.0 243 77.0
QL02p024995 Quercus lobata HOM05D006006 ORTHO05D007566 6.7e-113 411.0 252 72.6
RcHm_v2.0_Chr6g0276791 Rosa chinensis HOM05D006006 ORTHO05D007566 6.7e-113 411.0 244 75.8
Carub.0001s2078 Capsella rubella HOM05D006006 ORTHO05D007566 8.7e-113 410.6 248 75.8
Duzib093G0547 Durio zibethinus HOM05D006006 ORTHO05D007566 8.7e-113 410.6 245 75.5
MD10G1017500 Malus domestica HOM05D006006 ORTHO05D007566 8.7e-113 410.6 251 73.7
FAN24G1565 Fragaria x ananassa HOM05D006006 ORTHO05D007566 1.1e-112 410.2 244 77.0
FAN27G0920 Fragaria x ananassa HOM05D006006 ORTHO05D007566 1.1e-112 410.2 244 77.0
Prupe.8G021400 Prunus persica HOM05D006006 ORTHO05D007566 1.9e-112 409.5 249 74.7
PGSC0003DMG400017575 Solanum tuberosum HOM05D006006 ORTHO05D007566 1.9e-112 409.5 249 75.1
AL1G34470 Arabidopsis lyrata HOM05D006006 ORTHO05D007566 2.5e-112 409.1 248 76.2
Nitab4.5_0000633g0110 Nicotiana tabacum HOM05D006006 ORTHO05D007566 3.3e-112 408.7 244 76.2
Sabra02G0056100 Salix brachista HOM05D006006 ORTHO05D007566 3.3e-112 408.7 250 73.6
A06p17420 Brassica napus HOM05D006006 ORTHO05D007566 4.3e-112 408.3 248 75.8
CANSAT25G3881 Cannabis sativa HOM05D006006 ORTHO05D007566 4.3e-112 408.3 249 74.7
CARHR021760 Cardamine hirsuta HOM05D006006 ORTHO05D007566 4.3e-112 408.3 246 76.0
Cfa018352 Carpinus fangiana HOM05D006006 ORTHO05D007566 4.3e-112 408.3 249 73.5
Oeu051259.1 Olea europaea HOM05D006006 ORTHO05D007566 4.3e-112 408.3 250 74.4
Phvul.001G072900 Phaseolus vulgaris HOM05D006006 ORTHO05D007566 5.6e-112 407.9 250 73.6
Gorai.005G081300 Gossypium raimondii HOM05D006006 ORTHO05D007566 7.4e-112 407.5 245 75.5
Manes.02G175900 Manihot esculenta HOM05D006006 ORTHO05D007566 7.4e-112 407.5 248 72.6
BraA06t24839Z Brassica rapa HOM05D006006 ORTHO05D007566 9.6e-112 407.1 248 75.4
COL.COLO4_04848 Corchorus olitorius HOM05D006006 ORTHO05D007566 9.6e-112 407.1 246 74.8
Thhalv10008107m.g Eutrema salsugineum HOM05D006006 ORTHO05D007566 1.3e-111 406.8 248 75.0
BcaC05g26044 Brassica carinata HOM05D006006 ORTHO05D007566 1.6e-111 406.4 248 75.0
CAN.G62.45 Capsicum annuum HOM05D006006 ORTHO05D007566 1.6e-111 406.4 244 75.8
Potri.002G071300 Populus trichocarpa HOM05D006006 ORTHO05D007566 1.6e-111 406.4 250 74.4
Atru.chr13.1712 Acer truncatum HOM05D006006 ORTHO05D007566 2.1e-111 406.0 250 72.0
BcaB07g32125 Brassica carinata HOM05D006006 ORTHO05D007566 2.1e-111 406.0 248 75.0
C05p20260 Brassica napus HOM05D006006 ORTHO05D007566 2.1e-111 406.0 248 75.0
BolC5t30719H Brassica oleracea HOM05D006006 ORTHO05D007566 2.1e-111 406.0 248 75.0
CSS0049727 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 2.8e-111 405.6 249 75.5
AT1G21370 Arabidopsis thaliana HOM05D006006 ORTHO05D007566 3.7e-111 405.2 248 75.0
Gohir.D02G072100 Gossypium hirsutum HOM05D006006 ORTHO05D007566 3.7e-111 405.2 245 75.5
MSTRG.24200 Avicennia marina HOM05D006006 ORTHO05D007566 8.1e-111 404.1 246 74.4
Os04g0438500 Oryza sativa ssp. japonica HOM05D006006 ORTHO05D007566 8.1e-111 404.1 244 73.4
PGR042G3502 Punica granatum HOM05D006006 ORTHO05D007566 8.1e-111 404.1 249 74.3
CSS0044653 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 1.1e-110 403.7 249 75.1
Sp1g18920 Schrenkiella parvula HOM05D006006 ORTHO05D007566 1.8e-110 402.9 248 73.8
Lsat_1_v5_gn_1_8980 Lactuca sativa HOM05D006006 ORTHO05D007566 4.0e-110 401.7 245 73.1
BcaB03g12819 Brassica carinata HOM05D006006 ORTHO05D007566 5.3e-110 401.4 242 74.4
Eucgr.F04261 Eucalyptus grandis HOM05D006006 ORTHO05D007566 5.3e-110 401.4 248 72.6
MD05G1017500 Malus domestica HOM05D006006 ORTHO05D007566 5.3e-110 401.4 251 72.5
Aa31LG7G5530 Aethionema arabicum HOM05D006006 ORTHO05D007566 1.5e-109 399.8 248 74.6
Gohir.A02G066200 Gossypium hirsutum HOM05D006006 ORTHO05D007566 4.5e-109 398.3 245 73.9
TWI34G1885 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 4.5e-109 398.3 250 70.8
DCAR_008158 Daucus carota HOM05D006006 ORTHO05D007566 9.9e-109 397.1 242 74.0
PSO675G8728 Papaver somniferum HOM05D006006 ORTHO05D007566 9.9e-109 397.1 246 72.4
Zm00001eb422860 Zea mays HOM05D006006 ORTHO05D007566 9.9e-109 397.1 244 73.0
ATR1136G139 Amborella trichopoda HOM05D006006 ORTHO05D007566 2.2e-108 396.0 247 73.3
Peaxi162Scf00051g00516 Petunia axillaris HOM05D006006 ORTHO05D007566 3.8e-108 395.2 233 76.4
CiPaw.16G016900 Carya illinoinensis HOM05D006006 ORTHO05D007566 4.9e-108 394.8 250 71.6
Migut.N03230 Erythranthe guttata HOM05D006006 ORTHO05D007566 4.9e-108 394.8 244 73.0
Sed0017044 Sechium edule HOM05D006006 ORTHO05D007566 4.9e-108 394.8 251 71.7
Cc10_g14250 Coffea canephora HOM05D006006 ORTHO05D007566 6.4e-108 394.4 247 72.5
CsaV3_7G024870 Cucumis sativus L. HOM05D006006 ORTHO05D007566 1.1e-107 393.7 251 71.3
PSO541G2188 Papaver somniferum HOM05D006006 ORTHO05D007566 1.1e-107 393.7 246 72.0
C08p20770 Brassica napus HOM05D006006 ORTHO05D007566 1.4e-107 393.3 243 73.3
TWI60G1394 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 1.4e-107 393.3 250 70.4
FAN20G0686 Fragaria x ananassa HOM05D006006 ORTHO05D007566 1.9e-107 392.9 275 67.6
Haze_17707 Corylus avellana HOM05D006006 ORTHO05D007566 3.2e-107 392.1 279 65.9
ClCG09G009860 Citrullus lanatus HOM05D006006 ORTHO05D007566 4.2e-107 391.7 251 70.5
HanXRQChr04g0109001 Helianthus annuus HOM05D006006 ORTHO05D007566 7.1e-107 391.0 244 73.4
Gorai.013G105300 Gossypium raimondii HOM05D006006 ORTHO05D007566 1.6e-106 389.8 242 72.3
unitig_744.g24565 Utricularia gibba HOM05D006006 ORTHO05D007566 2.1e-106 389.4 245 70.6
Ah.01g005030 Amaranthus hybridus HOM05D006006 ORTHO05D007566 3.5e-106 388.7 247 72.9
Oeu014478.2 Olea europaea HOM05D006006 ORTHO05D007566 3.5e-106 388.7 269 68.0
Gohir.D03G061500 Gossypium hirsutum HOM05D006006 ORTHO05D007566 4.6e-106 388.3 242 72.7
ECA247G2705 Erigeron canadensis HOM05D006006 ORTHO05D007566 1.0e-105 387.1 243 71.6
Lj4A692T31 Lonicera japonica HOM05D006006 ORTHO05D007566 1.3e-105 386.7 247 71.3
HanXRQChr08g0217661 Helianthus annuus HOM05D006006 ORTHO05D007566 1.5e-104 383.3 243 72.4
HPP92_004629 Vanilla planifolia HOM05D006006 ORTHO05D007566 5.6e-104 381.3 251 67.7
unitig_21.g20180 Utricularia gibba HOM05D006006 ORTHO05D007566 9.6e-104 380.6 244 69.3
EL10Ac9g20647 Beta vulgaris HOM05D006006 ORTHO05D007566 1.6e-103 379.8 244 71.3
VMungo0647G2124 Vigna mungo HOM05D006006 ORTHO05D007566 1.4e-102 376.7 231 73.6
Actinidia15154 Actinidia chinensis HOM05D006006 ORTHO05D007566 1.2e-101 373.6 245 71.4
SHI09110 Sapria himalayana HOM05D006006 ORTHO05D007566 1.2e-101 373.6 247 68.4
MELO3C023695.2 Cucumis melo HOM05D006006 ORTHO05D007566 6.5e-100 367.9 310 57.7
SEGI_37970 Sequoiadendron giganteum HOM05D006006 ORTHO05D007566 1.2e-98 363.6 245 69.8
Mapoly0050s0105 Marchantia polymorpha HOM05D006006 ORTHO05D007566 2.7e-98 362.5 246 67.9
BolC8t49716H Brassica oleracea HOM05D006006 ORTHO05D007566 2.3e-97 359.4 247 66.8
Pp3c25_12020 Physcomitrium patens HOM05D006006 ORTHO05D007566 4.8e-95 351.7 244 66.0
C06p40100 Brassica napus HOM05D006006 ORTHO05D007566 1.0e-89 334.0 232 66.4
BcaC07g39093 Brassica carinata HOM05D006006 ORTHO05D007566 4.2e-83 312.0 247 61.5
Pp3c6_4630 Physcomitrium patens HOM05D006006 ORTHO05D007566 7.2e-83 311.2 244 60.2
SMO228G0011 Selaginella moellendorffii HOM05D006006 ORTHO05D007566 1.6e-82 310.1 243 60.9
AagrBONN_evm.TU.Sc2ySwM_344.2333 Anthoceros agrestis HOM05D006006 ORTHO05D007566 8.5e-68 261.2 173 69.9
Dinv25817 Davidia involucrata HOM05D006006 ORTHO05D007566 7.2e-67 258.1 156 76.3
Nitab4.5_0008475g0010 Nicotiana tabacum HOM05D006006 ORTHO05D007566 2.7e-61 239.6 140 79.3
MCO04G174 Micromonas commoda HOM05D006006 ORTHO05D007566 3.5e-61 239.2 248 48.0
Sc02g0004370 Simmondsia chinensis HOM05D006006 ORTHO05D007566 5.0e-60 235.3 140 77.1
Gohir.A02G108508 Gossypium hirsutum HOM05D006006 ORTHO05D007566 3.6e-58 229.2 139 75.5
Gohir.A02G108509 Gossypium hirsutum HOM05D006006 ORTHO05D007566 3.6e-58 229.2 139 75.5
SGA_v2.0_scaffold25G11170 Striga asiatica HOM05D006006 ORTHO05D007566 8.8e-57 224.6 139 74.8
TAR625G0955 Trochodendron aralioides HOM05D006006 ORTHO05D007566 4.8e-55 218.8 164 63.4
PRCOL_00006391 Prasinoderma coloniale HOM05D006006 ORTHO05D007566 1.3e-52 210.7 199 50.3
Cre02.g116000 Chlamydomonas reinhardtii HOM05D006006 ORTHO05D007566 1.1e-51 207.6 180 56.7
Pp3c5_24650 Physcomitrium patens HOM05D006006 ORTHO05D007566 2.3e-44 183.3 161 56.5
AUR62025132 Chenopodium quinoa HOM05D006006 ORTHO05D007566 3.5e-37 159.5 98 75.5
AUR62037127 Chenopodium quinoa HOM05D006006 ORTHO05D007566 7.8e-37 158.3 98 74.5
CDE04G1521 Ceratophyllum demersum HOM05D000566 ORTHO05D000686 2.1e-26 123.6 57 94.7
SGA_v2.0_scaffold35G14089 Striga asiatica HOM05D006006 ORTHO05D007566 2.1e-26 123.6 79 69.6
Ah.02g110550 Amaranthus hybridus HOM05D006006 ORTHO05D007566 2.0e-24 117.1 73 74.0
Pp3c16_22840 Physcomitrium patens HOM05D006006 ORTHO05D318415 5.2e-09 65.9 93 35.5


User provided reference genes

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