Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2585 Ceratophyllum demersum HOM05D006066 ORTHO05D007720 3.8e-199 698.0 350 100.0
Nn1g07817 Nelumbo nucifera HOM05D006066 ORTHO05D007720 4.2e-73 279.3 411 39.7
Aqoxy2G03103 Aquilegia oxysepala HOM05D006066 ORTHO05D007720 1.6e-69 267.3 410 38.8
TAR393G0002 Trochodendron aralioides HOM05D006066 ORTHO05D007720 4.0e-68 262.7 412 38.1
MD10G1165500 Malus domestica HOM05D006066 ORTHO05D007720 1.2e-64 251.1 413 36.3
Potri.002G241366 Populus trichocarpa HOM05D006066 ORTHO05D007720 1.6e-64 250.8 407 36.6
Hma1.2p1_1061F.1_g253440 Hydrangea macrophylla HOM05D006066 ORTHO05D007720 3.0e-63 246.5 411 34.1
Cpa.g.sc8.165 Carica papaya HOM05D006066 ORTHO05D007720 9.7e-62 241.5 411 34.8
CSS0038727 Camellia sinensis var. sinensis HOM05D006066 ORTHO05D007720 3.7e-61 239.6 413 35.4
CSS0045030 Camellia sinensis var. sinensis HOM05D006066 ORTHO05D007720 3.7e-61 239.6 413 35.4
PSO170G1150 Papaver somniferum HOM05D006066 ORTHO05D007720 4.8e-61 239.2 417 37.6
Ciclev10020152m.g Citrus clementina HOM05D006066 ORTHO05D007720 6.3e-61 238.8 412 36.9
HanXRQChr04g0110731 Helianthus annuus HOM05D006066 ORTHO05D007720 8.2e-61 238.4 412 37.1
Cfa008679 Carpinus fangiana HOM05D006066 ORTHO05D007720 1.4e-60 237.7 411 34.5
PSO782G0283 Papaver somniferum HOM05D006066 ORTHO05D007720 3.1e-60 236.5 417 38.1
Manes.11G092400 Manihot esculenta HOM05D006066 ORTHO05D007720 2.6e-59 233.4 410 34.1
Dinv09237 Davidia involucrata HOM05D006066 ORTHO05D007720 3.4e-59 233.0 412 35.4
CiPaw.01G110500 Carya illinoinensis HOM05D006066 ORTHO05D007720 5.9e-59 232.3 411 34.8
FvH4_2g19201 Fragaria vesca HOM05D006066 ORTHO05D007720 7.7e-59 231.9 413 34.9
Lj2C634T6 Lonicera japonica HOM05D006066 ORTHO05D007720 1.7e-58 230.7 412 35.7
Gohir.A11G137000 Gossypium hirsutum HOM05D006066 ORTHO05D007720 6.5e-58 228.8 415 34.7
Gorai.007G153600 Gossypium raimondii HOM05D006066 ORTHO05D007720 8.5e-58 228.4 415 34.5
Hma1.2p1_1061F.1_g253450 Hydrangea macrophylla HOM05D006066 ORTHO05D007720 1.9e-57 227.3 389 34.2
RcHm_v2.0_Chr6g0284991 Rosa chinensis HOM05D006066 ORTHO05D007720 1.9e-57 227.3 414 35.0
Atru.chr11.2652 Acer truncatum HOM05D006066 ORTHO05D007720 5.5e-57 225.7 411 34.1
Prupe.8G204000 Prunus persica HOM05D006066 ORTHO05D007720 1.4e-55 221.1 412 33.7
Rhsim01G0256300 Rhododendron simsii HOM05D006066 ORTHO05D007720 1.4e-55 221.1 412 32.3
THA.LOC104818950 Tarenaya hassleriana HOM05D006066 ORTHO05D007720 1.8e-55 220.7 422 33.4
AL3G18290 Arabidopsis lyrata HOM05D006066 ORTHO05D007720 6.7e-55 218.8 421 32.3
vmacro14760 Vaccinium macrocarpon HOM05D006066 ORTHO05D007720 6.7e-55 218.8 417 32.6
Solyc09g061380.3 Solanum lycopersicum HOM05D006066 ORTHO05D007720 2.0e-54 217.2 416 33.2
Ca_26562_v3 Cicer arietinum L. HOM05D006066 ORTHO05D007720 3.3e-54 216.5 414 33.6
CsaV3_3G029870 Cucumis sativus L. HOM05D006066 ORTHO05D007720 4.3e-54 216.1 410 32.7
Sopen09g024200 Solanum pennellii HOM05D006066 ORTHO05D007720 7.4e-54 215.3 416 32.7
AT3G07060 Arabidopsis thaliana HOM05D006066 ORTHO05D007720 1.3e-53 214.5 421 30.9
ClCG07G001890 Citrullus lanatus HOM05D006066 ORTHO05D007720 1.3e-53 214.5 410 33.4
Cc01_g17160 Coffea canephora HOM05D006066 ORTHO05D007720 1.3e-53 214.5 416 32.7
Thhalv10020116m.g Eutrema salsugineum HOM05D006066 ORTHO05D007720 1.7e-53 214.2 423 31.9
CAN.G154.6 Capsicum annuum HOM05D006066 ORTHO05D007720 2.2e-53 213.8 413 32.7
Sp3g06000 Schrenkiella parvula HOM05D006066 ORTHO05D007720 2.2e-53 213.8 422 33.2
C05p60330 Brassica napus HOM05D006066 ORTHO05D007720 1.8e-52 210.7 423 32.9
Lj2A644T10 Lonicera japonica HOM05D006066 ORTHO05D007720 2.4e-52 210.3 444 33.3
Carub.0003s0657 Capsella rubella HOM05D006066 ORTHO05D007720 3.1e-52 209.9 421 32.1
MELO3C026986.2 Cucumis melo HOM05D006066 ORTHO05D007720 3.1e-52 209.9 413 33.4
Sed0017682 Sechium edule HOM05D006066 ORTHO05D007720 3.1e-52 209.9 414 34.1
QL06p028105 Quercus lobata HOM05D006066 ORTHO05D007720 5.3e-52 209.1 509 30.3
BolC5t34680H Brassica oleracea HOM05D006066 ORTHO05D007720 9.1e-52 208.4 424 32.5
PGR119G0212 Punica granatum HOM05D006066 ORTHO05D007720 2.6e-51 206.8 411 32.1
Lj3g0025737 Lotus japonicus HOM05D006066 ORTHO05D007720 4.5e-51 206.1 417 33.6
TPR.G5589 Trifolium pratense HOM05D006066 ORTHO05D007720 4.5e-51 206.1 415 31.1
CARHR081650 Cardamine hirsuta HOM05D006066 ORTHO05D007720 1.3e-50 204.5 424 31.6
Hund18348 Selenicereus undatus HOM05D006066 ORTHO05D007720 1.7e-50 204.1 409 34.0
Phvul.010G014600 Phaseolus vulgaris HOM05D006066 ORTHO05D007720 3.8e-50 203.0 414 31.6
VMungo0331G1521 Vigna mungo HOM05D006066 ORTHO05D007720 1.1e-49 201.4 414 30.9
ECA236G0120 Erigeron canadensis HOM05D006066 ORTHO05D007720 1.4e-49 201.1 413 31.5
Nitab4.5_0000045g0020 Nicotiana tabacum HOM05D006066 ORTHO05D007720 1.4e-49 201.1 413 32.0
AUR62008867 Chenopodium quinoa HOM05D006066 ORTHO05D007720 1.9e-49 200.7 412 31.3
Dinv01555 Davidia involucrata HOM05D006066 ORTHO05D007720 2.5e-49 200.3 346 36.4
Eucgr.K03610 Eucalyptus grandis HOM05D006066 ORTHO05D007720 3.2e-49 199.9 412 32.3
Lalb_Chr07g0194051 Lupinus albus HOM05D006066 ORTHO05D007720 1.2e-48 198.0 416 31.0
Lsat_1_v5_gn_8_90041 Lactuca sativa HOM05D006066 ORTHO05D007720 1.6e-48 197.6 410 33.2
Eucgr.L02049 Eucalyptus grandis HOM05D006066 ORTHO05D007720 2.7e-48 196.8 412 31.8
EL10Ac7g17774 Beta vulgaris HOM05D006066 ORTHO05D007720 7.9e-48 195.3 415 33.5
Psat2g159600 Pisum sativum HOM05D006066 ORTHO05D007720 7.9e-48 195.3 415 30.8
TWI36G0510 Tripterygium wilfordii HOM05D006066 ORTHO05D007720 7.9e-48 195.3 406 32.3
BcaC05g29836 Brassica carinata HOM05D006066 ORTHO05D000168 1.0e-47 194.9 442 31.2
Medtr4g022660 Medicago truncatula HOM05D006066 ORTHO05D007720 6.7e-47 192.2 416 31.0
Nitab4.5_0001872g0040 Nicotiana tabacum HOM05D006066 ORTHO05D007720 6.7e-47 192.2 411 32.4
Medtr7g026915 Medicago truncatula HOM05D006066 ORTHO05D007720 2.0e-46 190.7 416 31.0
Peaxi162Scf00107g01622 Petunia axillaris HOM05D006066 ORTHO05D007720 5.7e-46 189.1 379 33.8
Zm00001eb173150 Zea mays HOM05D006066 ORTHO05D007720 7.4e-46 188.7 418 31.6
Ah.08g213920 Amaranthus hybridus HOM05D006066 ORTHO05D007720 1.3e-45 188.0 406 32.5
Actinidia23727 Actinidia chinensis HOM05D006066 ORTHO05D007720 2.2e-45 187.2 345 34.8
Migut.D00528 Erythranthe guttata HOM05D006066 ORTHO05D007720 4.8e-45 186.0 412 29.4
COL.COLO4_07189 Corchorus olitorius HOM05D006066 ORTHO05D007720 1.4e-44 184.5 379 30.9
GSVIVG01028660001 Vitis vinifera HOM05D006066 ORTHO05D007720 1.8e-44 184.1 349 33.2
ATR0736G144 Amborella trichopoda HOM05D006066 ORTHO05D007720 4.1e-44 183.0 420 31.2
Aa31LG5G17620 Aethionema arabicum HOM05D006066 ORTHO05D007720 1.2e-43 181.4 472 29.0
BcaC05g29758 Brassica carinata HOM05D006066 ORTHO05D007720 1.2e-43 181.4 394 31.2
FAN27G1043 Fragaria x ananassa HOM05D006066 ORTHO05D007720 1.2e-43 181.4 303 37.6
AUR62031844 Chenopodium quinoa HOM05D006066 ORTHO05D007720 2.0e-43 180.6 386 31.6
FAN15G1679 Fragaria x ananassa HOM05D006066 ORTHO05D007720 4.5e-43 179.5 414 31.6
FAN24G1416 Fragaria x ananassa HOM05D006066 ORTHO05D000168 5.9e-43 179.1 406 31.5
BraA05t22840Z Brassica rapa HOM05D006066 ORTHO05D000168 8.5e-42 175.3 394 29.4
SGA_v2.0_scaffold8G04647 Striga asiatica HOM05D006066 ORTHO05D007720 1.6e-40 171.0 433 29.3
PSO674G0067 Papaver somniferum HOM05D006066 ORTHO05D007720 4.7e-40 169.5 330 36.1
SalBow6G7080 Salvia bowleyana HOM05D006066 ORTHO05D007720 1.8e-39 167.5 427 30.2
A05p41140 Brassica napus HOM05D006066 ORTHO05D007720 7.4e-38 162.2 417 28.1
SHI34881 Sapria himalayana HOM05D006066 ORTHO05D007720 9.7e-38 161.8 248 37.9
SGA_v2.0_scaffold586G53055 Striga asiatica HOM05D006066 ORTHO05D007720 2.2e-37 160.6 420 28.3
Haze_11697 Corylus avellana HOM05D006066 ORTHO05D007720 2.4e-36 157.1 342 31.0
DCAR_018556 Daucus carota HOM05D006066 ORTHO05D007720 5.3e-36 156.0 357 30.8
arahy.Tifrunner.gnm1.ann1.50JBL9 Arachis hypogaea HOM05D006066 ORTHO05D007720 2.3e-31 140.6 353 28.9
Aqoxy5G00070 Aquilegia oxysepala HOM05D006066 ORTHO05D007720 6.8e-31 139.0 262 35.5
Duzib133G0184 Durio zibethinus HOM05D006066 ORTHO05D007720 8.8e-31 138.7 313 30.4
MSTRG.21426 Avicennia marina HOM05D006066 ORTHO05D007720 2.6e-30 137.1 207 36.2
MD05G1176900 Malus domestica HOM05D006066 ORTHO05D007720 3.4e-30 136.7 257 33.9
unitig_22.g5305 Utricularia gibba HOM05D006066 ORTHO05D007720 9.7e-30 135.2 362 29.6
SEGI_19430 Sequoiadendron giganteum HOM05D006066 ORTHO05D007720 3.7e-29 133.3 406 27.8
Thecc.01G227100 Theobroma cacao HOM05D006066 ORTHO05D007720 1.0e-26 125.2 262 32.8
arahy.Tifrunner.gnm1.ann1.9R7KTD Arachis hypogaea HOM05D006066 ORTHO05D007720 1.1e-25 121.7 351 26.8
Os08g0135300 Oryza sativa ssp. japonica HOM05D006066 ORTHO05D007720 5.9e-19 99.4 145 38.6
Gohir.D11G143350 Gossypium hirsutum HOM05D006066 ORTHO05D007720 1.5e-17 94.7 146 33.6
Glyma.19G124200 Glycine max HOM05D006066 ORTHO05D007720 1.2e-16 91.7 147 33.3
vmacro14757 Vaccinium macrocarpon HOM05D006066 ORTHO05D007720 1.2e-14 85.1 69 58.0
Pp3c3_5060 Physcomitrium patens HOM05D006066 ORTHO05D007720 2.0e-14 84.3 333 25.2
PGSC0003DMG400009670 Solanum tuberosum HOM05D006066 ORTHO05D007720 2.8e-13 80.5 117 36.8
MSTRG.21425 Avicennia marina HOM05D006066 ORTHO05D007720 2.3e-10 70.9 81 39.5
Sc24g0003620 Simmondsia chinensis HOM05D006066 ORTHO05D007720 7.3e-09 65.9 148 27.0
Lsat_1_v5_gn_1_123760 Lactuca sativa HOM05D006066 ORTHO05D003550 1.2e-06 58.5 56 50.0
Mapoly0057s0011 Marchantia polymorpha HOM05D006066 ORTHO05D007720 1.5e-06 58.2 152 30.3


User provided reference genes

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