Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2554 Ceratophyllum demersum HOM05D007181 ORTHO05D008722 4.2e-119 431.4 222 100.0
MBI13_g01691_MAGBIO Magnolia biondii HOM05D007181 ORTHO05D008722 1.4e-58 230.3 194 58.2
Nn8g40634 Nelumbo nucifera HOM05D007181 ORTHO05D008722 1.1e-55 220.7 194 61.3
Nn8g40635 Nelumbo nucifera HOM05D007181 ORTHO05D008722 4.7e-54 215.3 194 60.3
CSS0010421 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 3.7e-51 205.7 199 52.3
CSS0018066 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 2.4e-50 203.0 196 53.1
Dinv32881 Davidia involucrata HOM05D007181 ORTHO05D008722 2.8e-46 189.5 203 52.2
Actinidia19968 Actinidia chinensis HOM05D007181 ORTHO05D008722 6.2e-46 188.3 199 47.2
GSVIVG01003131001 Vitis vinifera HOM05D007181 ORTHO05D008722 6.2e-46 188.3 210 50.5
Hma1.2p1_0760F.1_g214120 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 2.6e-44 183.0 199 47.7
Aqoxy7G04176 Aquilegia oxysepala HOM05D007181 ORTHO05D008722 3.7e-43 179.1 206 44.7
PSO210G2677 Papaver somniferum HOM05D007181 ORTHO05D008722 3.7e-43 179.1 149 58.4
PSO210G2070 Papaver somniferum HOM05D007181 ORTHO05D008722 3.2e-42 176.0 144 63.9
HPP92_028259 Vanilla planifolia HOM05D007181 ORTHO05D008722 4.1e-42 175.6 136 58.8
Hma1.2p1_1332F.1_g276040 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 5.4e-42 175.3 206 47.1
arahy.Tifrunner.gnm1.ann1.M9RGYA Arachis hypogaea HOM05D007181 ORTHO05D008722 1.0e-40 171.0 194 44.8
RcHm_v2.0_Chr6g0289821 Rosa chinensis HOM05D007181 ORTHO05D008722 1.7e-40 170.2 177 48.0
AUR62032277 Chenopodium quinoa HOM05D007181 ORTHO05D008722 3.3e-39 166.0 203 44.3
Prupe.8G234100 Prunus persica HOM05D007181 ORTHO05D008722 4.3e-39 165.6 190 46.8
Gohir.D08G205700 Gossypium hirsutum HOM05D007181 ORTHO05D008722 1.6e-38 163.7 148 57.4
Lj1g0009574 Lotus japonicus HOM05D007181 ORTHO05D008722 1.6e-38 163.7 142 52.1
Gorai.004G217700 Gossypium raimondii HOM05D007181 ORTHO05D008722 2.8e-38 162.9 148 54.1
CANSAT25G0029 Cannabis sativa HOM05D007181 ORTHO05D008722 3.6e-38 162.5 134 57.5
Phvul.001G155300 Phaseolus vulgaris HOM05D007181 ORTHO05D008722 3.6e-38 162.5 203 47.3
Gorai.007G100900 Gossypium raimondii HOM05D007181 ORTHO05D008722 4.7e-38 162.2 148 58.1
Oeu025775.1 Olea europaea HOM05D007181 ORTHO05D008722 3.1e-37 159.5 134 60.4
Gohir.D11G094500 Gossypium hirsutum HOM05D007181 ORTHO05D008722 4.0e-37 159.1 148 58.1
vmacro02617 Vaccinium macrocarpon HOM05D007181 ORTHO05D008722 6.8e-37 158.3 212 41.0
VMungo1383G2224 Vigna mungo HOM05D007181 ORTHO05D008722 6.8e-37 158.3 203 46.8
Sabra02G0038300 Salix brachista HOM05D007181 ORTHO05D008722 8.9e-37 157.9 147 49.7
Nitab4.5_0003555g0080 Nicotiana tabacum HOM05D007181 ORTHO05D008722 1.2e-36 157.5 216 43.1
Ciclev10022317m.g Citrus clementina HOM05D007181 ORTHO05D008722 1.5e-36 157.1 151 55.0
Potri.002G047400 Populus trichocarpa HOM05D007181 ORTHO05D008722 1.5e-36 157.1 147 49.0
Aa31LG10G17220 Aethionema arabicum HOM05D007181 ORTHO05D008722 2.0e-36 156.8 203 45.3
AUR62011964 Chenopodium quinoa HOM05D007181 ORTHO05D008722 2.0e-36 156.8 210 41.4
FvH4_2g22890 Fragaria vesca HOM05D007181 ORTHO05D008722 5.8e-36 155.2 156 54.5
PGSC0003DMG400004278 Solanum tuberosum HOM05D007181 ORTHO05D008722 5.8e-36 155.2 155 50.3
EL10Ac5g10486 Beta vulgaris HOM05D007181 ORTHO05D008722 7.5e-36 154.8 141 51.8
Peaxi162Scf00146g10111 Petunia axillaris HOM05D007181 ORTHO05D008722 7.5e-36 154.8 156 53.8
Cc00_g18800 Coffea canephora HOM05D007181 ORTHO05D008722 9.8e-36 154.5 221 43.0
SGA_v2.0_scaffold1G00542 Striga asiatica HOM05D007181 ORTHO05D008722 1.3e-35 154.1 196 49.0
CAN.G575.12 Capsicum annuum HOM05D007181 ORTHO05D008722 1.7e-35 153.7 163 54.0
Gohir.A05G078500 Gossypium hirsutum HOM05D000144 ORTHO05D008722 1.7e-35 153.7 142 49.3
Medtr7g095740 Medicago truncatula HOM05D007181 ORTHO05D008722 1.7e-35 153.7 195 46.7
SEGI_03897 Sequoiadendron giganteum HOM05D007181 ORTHO05D008722 2.2e-35 153.3 208 46.2
Solyc12g100320.2 Solanum lycopersicum HOM05D007181 ORTHO05D008722 2.9e-35 152.9 155 48.4
Duzib211G0516 Durio zibethinus HOM05D007181 ORTHO05D008722 3.7e-35 152.5 197 47.2
Haze_04637 Corylus avellana HOM05D000129 ORTHO05D000144 4.9e-35 152.1 195 43.6
Os11g0616200 Oryza sativa ssp. japonica HOM05D007181 ORTHO05D008722 4.9e-35 152.1 203 44.8
Sopen12g034950 Solanum pennellii HOM05D007181 ORTHO05D008722 1.1e-34 151.0 155 48.4
Haze_04636 Corylus avellana HOM05D007181 ORTHO05D008722 1.4e-34 150.6 209 42.1
CiPaw.08G110300 Carya illinoinensis HOM05D007181 ORTHO05D008722 2.4e-34 149.8 140 55.0
MD03G1257200 Malus domestica HOM05D007181 ORTHO05D008722 3.2e-34 149.4 153 54.2
Lj2P1163T10 Lonicera japonica HOM05D007181 ORTHO05D008722 5.4e-34 148.7 180 43.9
SalBow4G0298 Salvia bowleyana HOM05D007181 ORTHO05D008722 5.4e-34 148.7 133 59.4
SalBow4G3342 Salvia bowleyana HOM05D007181 ORTHO05D008722 5.4e-34 148.7 133 59.4
SalBow6G6987 Salvia bowleyana HOM05D007181 ORTHO05D008722 5.4e-34 148.7 133 59.4
Gohir.A11G090066 Gossypium hirsutum HOM05D007181 ORTHO05D008722 7.1e-34 148.3 144 54.9
Thecc.01G270500 Theobroma cacao HOM05D007181 ORTHO05D008722 1.6e-33 147.1 205 41.0
Ah.11g050140 Amaranthus hybridus HOM05D007181 ORTHO05D008722 2.1e-33 146.7 149 47.7
Rhsim13G0029700 Rhododendron simsii HOM05D007181 ORTHO05D008722 2.1e-33 146.7 197 42.1
BraA09t40915Z Brassica rapa HOM05D007181 ORTHO05D008722 3.5e-33 146.0 134 52.2
Glyma.19G160000 Glycine max HOM05D007181 ORTHO05D008722 3.5e-33 146.0 158 51.9
Atru.chr5.1530 Acer truncatum HOM05D007181 ORTHO05D008722 4.6e-33 145.6 195 45.1
Sp5g00160 Schrenkiella parvula HOM05D007181 ORTHO05D008722 4.6e-33 145.6 135 57.8
TPR.G19095 Trifolium pratense HOM05D007181 ORTHO05D008722 7.8e-33 144.8 150 53.3
A09p55080 Brassica napus HOM05D007181 ORTHO05D008722 1.0e-32 144.4 156 46.8
BcaC07g40807 Brassica carinata HOM05D007181 ORTHO05D008722 1.7e-32 143.7 134 50.7
C08p38020 Brassica napus HOM05D007181 ORTHO05D008722 1.7e-32 143.7 134 50.7
BolC8t51376H Brassica oleracea HOM05D007181 ORTHO05D008722 1.7e-32 143.7 134 50.7
Gohir.A08G187400 Gossypium hirsutum HOM05D007181 ORTHO05D008722 2.3e-32 143.3 148 54.1
THA.LOC104817569 Tarenaya hassleriana HOM05D007181 ORTHO05D008722 3.9e-32 142.5 100 59.0
Manes.05G082200 Manihot esculenta HOM05D007181 ORTHO05D008722 5.1e-32 142.1 108 59.3
MELO3C001156.2 Cucumis melo HOM05D007181 ORTHO05D008722 1.1e-31 141.0 104 60.6
Lsat_1_v5_gn_5_185100 Lactuca sativa HOM05D007181 ORTHO05D008722 2.5e-31 139.8 136 49.3
ClCG07G000510 Citrullus lanatus HOM05D007181 ORTHO05D008722 5.6e-31 138.7 152 53.3
AL5G46250 Arabidopsis lyrata HOM05D007181 ORTHO05D008722 7.3e-31 138.3 134 53.7
COL.COLO4_09179 Corchorus olitorius HOM05D007181 ORTHO05D008722 7.3e-31 138.3 107 54.2
Thhalv10006272m.g Eutrema salsugineum HOM05D007181 ORTHO05D008722 7.3e-31 138.3 134 56.0
Cpa.g.sc52.129 Carica papaya HOM05D007181 ORTHO05D008722 9.5e-31 137.9 141 53.2
Sed0014767 Sechium edule HOM05D007181 ORTHO05D008722 9.5e-31 137.9 102 60.8
Ca_20981_v3 Cicer arietinum L. HOM05D007181 ORTHO05D008722 2.1e-30 136.7 99 58.6
CsaV3_2G013840 Cucumis sativus L. HOM05D007181 ORTHO05D008722 2.1e-30 136.7 101 60.4
CARHR291580 Cardamine hirsuta HOM05D007181 ORTHO05D008722 2.3e-29 133.3 153 50.3
BcaB03g13697 Brassica carinata HOM05D007181 ORTHO05D008722 3.1e-29 132.9 135 55.6
SHI10021 Sapria himalayana HOM05D007181 ORTHO05D008722 1.2e-28 131.0 104 56.7
TAR624G0264 Trochodendron aralioides HOM05D007181 ORTHO05D008722 1.5e-28 130.6 219 37.4
SMO143G0136 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 2.6e-28 129.8 133 47.4
FAN24G0107 Fragaria x ananassa HOM05D007181 ORTHO05D008722 5.8e-28 128.6 170 48.2
Pp3c24_16150 Physcomitrium patens HOM05D007181 ORTHO05D008722 5.8e-28 128.6 140 43.6
PGR044G0699 Punica granatum HOM05D007181 ORTHO05D008722 5.8e-28 128.6 138 51.4
Sc05g0001150 Simmondsia chinensis HOM05D007181 ORTHO05D008722 5.8e-28 128.6 209 44.0
AagrBONN_evm.TU.Sc2ySwM_362.2054 Anthoceros agrestis HOM05D007181 ORTHO05D008722 1.7e-27 127.1 108 56.5
MD11G1277900 Malus domestica HOM05D007181 ORTHO05D008722 4.9e-27 125.6 134 45.5
AT3G63390 Arabidopsis thaliana HOM05D007181 ORTHO05D008722 1.1e-26 124.4 137 51.1
Zm00001eb166760 Zea mays HOM05D007181 ORTHO05D008722 4.1e-26 122.5 160 47.5
Pp3c8_19140 Physcomitrium patens HOM05D007181 ORTHO05D008722 3.5e-25 119.4 145 39.3
Carub.0005s3001 Capsella rubella HOM05D007181 ORTHO05D008722 1.0e-24 117.9 134 43.3
QL12p042395 Quercus lobata HOM05D007181 ORTHO05D008722 3.9e-24 115.9 102 50.0
HanXRQChr01g0005991 Helianthus annuus HOM05D007181 ORTHO05D008722 1.1e-23 114.4 138 42.8
Mapoly0126s0033 Marchantia polymorpha HOM05D007181 ORTHO05D008722 1.9e-18 97.1 101 46.5
VMungo1215G0236 Vigna mungo HOM05D007181 ORTHO05D008722 2.7e-17 93.2 128 37.5
Psat3g061320 Pisum sativum HOM05D007181 ORTHO05D008722 5.1e-16 89.0 73 54.8
ATR0099G083 Amborella trichopoda HOM05D007181 ORTHO05D008722 2.5e-15 86.7 67 56.7
ATR0099G072 Amborella trichopoda HOM05D007181 ORTHO05D008722 4.8e-14 82.4 83 60.2
SMO203G0031 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 1.1e-13 81.3 60 55.0
BcaC07g42693 Brassica carinata HOM05D007181 ORTHO05D008722 3.1e-13 79.7 134 35.8
CBR_g39816 Chara braunii HOM05D007181 ORTHO05D008722 6.4e-11 72.0 89 40.4
SMO203G0072 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 1.1e-10 71.2 61 47.5


User provided reference genes

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