Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 6.2e-230 800.4 401 100.0
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 1.2e-121 440.7 345 64.6
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.1e-121 439.9 348 63.5
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 4.7e-121 438.7 344 64.2
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 4.7e-121 438.7 349 64.2
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 4.7e-121 438.7 361 63.2
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 3.4e-119 432.6 348 62.1
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 9.8e-119 431.0 346 63.0
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 1.3e-118 430.6 374 58.8
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 2.9e-118 429.5 333 63.7
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 1.4e-117 427.2 374 58.8
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 4.1e-117 425.6 365 60.0
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 1.2e-116 424.1 348 62.1
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 2.7e-116 422.9 339 63.4
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 7.8e-116 421.4 322 64.6
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.0e-115 421.0 379 58.3
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 1.7e-115 420.2 405 57.0
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.3e-115 419.9 323 64.7
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 5.1e-115 418.7 397 56.7
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 5.1e-115 418.7 374 57.5
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 8.6e-115 417.9 355 59.7
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 8.6e-115 417.9 336 64.0
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 3.3e-114 416.0 398 57.8
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 5.6e-114 415.2 404 57.2
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 1.2e-113 414.1 345 61.7
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 1.2e-113 414.1 398 57.0
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 1.6e-113 413.7 343 61.5
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 1.6e-113 413.7 380 56.8
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 1.6e-113 413.7 366 57.9
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 6.2e-113 411.8 355 59.7
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 6.2e-113 411.8 403 54.8
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 6.2e-113 411.8 340 62.1
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 6.2e-113 411.8 352 59.9
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 1.1e-112 411.0 355 59.7
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 1.8e-112 410.2 343 61.2
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 1.8e-112 410.2 386 55.7
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 1.8e-112 410.2 360 58.3
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 3.1e-112 409.5 353 60.6
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 6.8e-112 408.3 354 59.6
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 1.2e-111 407.5 336 60.7
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 1.5e-111 407.1 350 59.4
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 2.0e-111 406.8 321 63.2
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 3.4e-111 406.0 398 54.8
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 4.4e-111 405.6 399 55.9
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 4.4e-111 405.6 343 60.6
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 2.9e-110 402.9 335 60.3
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 4.9e-110 402.1 324 60.8
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 4.9e-110 402.1 324 60.8
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 2.4e-109 399.8 326 61.0
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 2.4e-109 399.8 364 58.0
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 2.7e-108 396.4 396 53.5
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 3.5e-108 396.0 324 61.4
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 4.6e-108 395.6 393 55.7
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 1.0e-107 394.4 322 62.1
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 1.7e-107 393.7 384 54.9
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 6.6e-107 391.7 320 60.6
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 1.5e-106 390.6 453 49.4
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 1.9e-106 390.2 376 55.3
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 3.3e-106 389.4 341 59.2
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 4.3e-106 389.0 323 60.4
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 4.3e-106 389.0 323 60.7
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 4.3e-106 389.0 323 60.7
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 9.6e-106 387.9 338 58.6
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 9.6e-106 387.9 397 52.9
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 2.8e-105 386.3 367 55.3
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 6.2e-105 385.2 369 54.7
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 2.4e-104 383.3 320 61.2
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 3.1e-104 382.9 353 55.8
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 4.0e-104 382.5 331 58.9
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 8.9e-104 381.3 372 54.3
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 2.0e-103 380.2 393 51.9
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 3.4e-103 379.4 378 53.2
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 5.8e-103 378.6 341 55.7
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 5.8e-103 378.6 338 58.0
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 1.7e-102 377.1 336 58.3
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 6.4e-102 375.2 321 59.5
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 2.4e-101 373.2 368 54.1
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 2.3e-99 366.7 353 55.8
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 5.1e-99 365.5 292 64.0
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 1.5e-98 364.0 321 57.3
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.6e-97 360.5 321 58.6
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 1.1e-96 357.8 370 50.8
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 6.9e-96 355.1 360 54.4
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 1.2e-95 354.4 303 61.1
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 2.6e-95 353.2 331 56.2
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 3.2e-93 346.3 354 52.3
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 1.6e-92 344.0 291 59.8
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 1.8e-91 340.5 296 59.5
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 6.7e-91 338.6 318 56.9
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 8.7e-91 338.2 359 51.3
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 8.7e-91 338.2 378 50.0
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 1.1e-90 337.8 334 51.8
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 9.0e-88 328.2 327 55.4
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 3.9e-83 312.8 329 49.5
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.5e-82 310.1 346 51.4
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 1.0e-78 298.1 315 51.1
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 4.9e-78 295.8 310 51.3
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 4.2e-77 292.7 330 45.5
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 1.9e-74 283.9 244 59.4
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 1.3e-73 281.2 310 49.4
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 5.3e-72 275.8 322 46.6
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 5.9e-71 272.3 348 40.8
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 8.5e-70 268.5 463 38.9
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 7.9e-68 261.9 322 42.5
Eucgr.E00231 Eucalyptus grandis HOM05D006137 ORTHO05D007697 6.9e-64 248.8 286 48.3
AUR62002644 Chenopodium quinoa HOM05D006137 ORTHO05D007697 1.8e-56 224.2 150 74.0
Hund09822 Selenicereus undatus HOM05D006137 ORTHO05D007697 3.1e-56 223.4 161 69.6
Manes.15G185701 Manihot esculenta HOM05D006137 ORTHO05D007697 1.7e-54 217.6 238 50.0
Ca_25185_v3 Cicer arietinum L. HOM05D006137 ORTHO05D007697 3.2e-53 213.4 197 55.3
C03p78000 Brassica napus HOM05D006137 ORTHO05D007697 5.0e-46 189.5 147 65.3
AUR62002645 Chenopodium quinoa HOM05D006137 ORTHO05D007697 2.8e-41 173.7 165 53.9
Oeu033557.2 Olea europaea HOM05D006137 ORTHO05D007697 3.7e-41 173.3 172 49.4
AUR62040998 Chenopodium quinoa HOM05D006137 ORTHO05D007697 3.1e-40 170.2 133 60.9
BolC1t02019H Brassica oleracea HOM05D006137 ORTHO05D007697 2.2e-38 164.1 185 53.5
BolC3t20061H Brassica oleracea HOM05D006137 ORTHO05D007697 3.0e-35 153.7 185 49.2
Hund09821 Selenicereus undatus HOM05D006137 ORTHO05D000006 3.0e-35 153.7 129 55.0
C01p20920 Brassica napus HOM05D006137 ORTHO05D007697 2.6e-34 150.6 185 49.2
CBR_g18978 Chara braunii HOM05D006137 ORTHO05D007697 3.7e-33 146.7 198 44.4
Glyma.07G152633 Glycine max HOM05D006137 ORTHO05D007697 7.7e-31 139.0 111 58.6
AUR62040999 Chenopodium quinoa HOM05D006137 ORTHO05D007697 2.5e-29 134.0 122 61.5
MCO11G470 Micromonas commoda HOM05D006137 ORTHO05D007697 2.0e-23 114.4 226 32.3
Medtr1g009450 Medicago truncatula HOM05D006137 ORTHO05D007697 2.9e-22 110.5 121 52.9
PRCOL_00002339 Prasinoderma coloniale HOM05D006137 ORTHO05D007697 3.4e-18 97.1 217 32.3
BcaC09g50780 Brassica carinata HOM05D006137 ORTHO05D007697 2.3e-11 74.3 103 46.6
C02p41610 Brassica napus HOM05D006137 ORTHO05D007697 1.2e-10 72.0 42 73.8
BolC2t10179H Brassica oleracea HOM05D006137 ORTHO05D007697 1.2e-10 72.0 42 73.8
BolC2t11174H Brassica oleracea HOM05D006137 ORTHO05D007697 1.9e-08 64.7 31 83.9


User provided reference genes

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