Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2495 Ceratophyllum demersum HOM05D007293 ORTHO05D009143 1.6e-49 199.1 101 100.0
CDE04G1122 Ceratophyllum demersum HOM05D007293 ORTHO05D009143 6.9e-37 157.1 101 83.2
TWI75G0451 Tripterygium wilfordii HOM05D007293 ORTHO05D009143 9.7e-15 83.6 107 53.3
Atru.chr11.2025 Acer truncatum HOM05D007293 ORTHO05D009143 3.7e-14 81.6 79 62.0
EL10Ac6g13673 Beta vulgaris HOM05D007293 ORTHO05D009143 6.3e-14 80.9 63 68.3
Dinv33495 Davidia involucrata HOM05D007293 ORTHO05D009143 4.1e-13 78.2 63 65.1
Eucgr.H02610 Eucalyptus grandis HOM05D007293 ORTHO05D009143 4.1e-13 78.2 62 67.7
CSS0045153 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 5.3e-13 77.8 105 47.6
CiPaw.05G150900 Carya illinoinensis HOM05D007293 ORTHO05D009143 9.1e-13 77.0 95 49.5
AUR62014041 Chenopodium quinoa HOM05D007293 ORTHO05D009143 1.6e-12 76.3 89 52.8
Ciclev10033010m.g Citrus clementina HOM05D007293 ORTHO05D009143 2.0e-12 75.9 108 50.9
Thecc.02G249100 Theobroma cacao HOM05D007293 ORTHO05D009143 2.0e-12 75.9 98 51.0
Aqoxy3G02974 Aquilegia oxysepala HOM05D007293 ORTHO05D009143 2.6e-12 75.5 71 57.7
ClCG08G018060 Citrullus lanatus HOM05D007293 ORTHO05D009143 3.5e-12 75.1 98 49.0
Gohir.A03G139900 Gossypium hirsutum HOM05D007293 ORTHO05D009143 3.5e-12 75.1 69 62.3
CSS0040497 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 4.5e-12 74.7 105 45.7
RcHm_v2.0_Chr4g0443851 Rosa chinensis HOM05D007293 ORTHO05D009143 5.9e-12 74.3 56 69.6
Hund05995 Selenicereus undatus HOM05D007293 ORTHO05D009143 5.9e-12 74.3 48 77.1
THA.LOC104822141 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 5.9e-12 74.3 98 49.0
FvH4_4g34460 Fragaria vesca HOM05D007293 ORTHO05D009143 7.7e-12 73.9 98 49.0
Gorai.005G182700 Gossypium raimondii HOM05D007293 ORTHO05D009143 1.0e-11 73.6 69 60.9
MD13G1091900 Malus domestica HOM05D007293 ORTHO05D009143 1.3e-11 73.2 48 79.2
PGR119G0124 Punica granatum HOM05D007293 ORTHO05D009143 1.3e-11 73.2 60 66.7
THA.LOC104808972 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 1.3e-11 73.2 98 50.0
Cfa009144 Carpinus fangiana HOM05D007293 ORTHO05D009143 1.7e-11 72.8 49 79.6
Manes.13G030700 Manihot esculenta HOM05D007293 ORTHO05D009143 1.7e-11 72.8 48 79.2
FAN12G1260 Fragaria x ananassa HOM05D007293 ORTHO05D009143 2.2e-11 72.4 98 50.0
RcHm_v2.0_Chr4g0443841 Rosa chinensis HOM05D007293 ORTHO05D009143 2.2e-11 72.4 106 47.2
Sc04g0009130 Simmondsia chinensis HOM05D007293 ORTHO05D009143 2.2e-11 72.4 85 52.9
FAN17G1887 Fragaria x ananassa HOM05D007293 ORTHO05D009143 2.9e-11 72.0 98 46.9
FAN22G1529 Fragaria x ananassa HOM05D007293 ORTHO05D009143 3.8e-11 71.6 98 46.9
Gohir.D02G162700 Gossypium hirsutum HOM05D007293 ORTHO05D009143 3.8e-11 71.6 69 59.4
TAR622G0242 Trochodendron aralioides HOM05D007293 ORTHO05D009143 3.8e-11 71.6 96 49.0
CSS0015603 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 5.0e-11 71.2 104 45.2
AUR62005378 Chenopodium quinoa HOM05D007293 ORTHO05D009143 5.0e-11 71.2 86 51.2
Nn3g16892 Nelumbo nucifera HOM05D007293 ORTHO05D009143 5.0e-11 71.2 47 76.6
MD16G1092500 Malus domestica HOM05D007293 ORTHO05D009143 6.5e-11 70.9 48 77.1
Duzib268G1575 Durio zibethinus HOM05D007293 ORTHO05D009143 8.5e-11 70.5 98 48.0
HanXRQChr08g0220621 Helianthus annuus HOM05D007293 ORTHO05D009143 8.5e-11 70.5 101 47.5
Prupe.1G253900 Prunus persica HOM05D007293 ORTHO05D009143 1.1e-10 70.1 49 75.5
Dinv35058 Davidia involucrata HOM05D007293 ORTHO05D009143 2.5e-10 68.9 62 58.1
MSTRG.24016 Avicennia marina HOM05D007293 ORTHO05D009143 3.2e-10 68.6 79 50.6
Lj7A591G78 Lonicera japonica HOM05D007293 ORTHO05D009143 4.2e-10 68.2 54 68.5
BcaC08g45820 Brassica carinata HOM05D007293 ORTHO05D009143 7.2e-10 67.4 98 45.9
CANSAT01G1482 Cannabis sativa HOM05D007293 ORTHO05D009143 9.4e-10 67.0 73 54.8
Glyma.02G034600 Glycine max HOM05D007293 ORTHO05D009143 9.4e-10 67.0 99 47.5
MBI10_g11075_MAGBIO Magnolia biondii HOM05D007293 ORTHO05D009143 1.2e-09 66.6 65 53.8
CARHR063530 Cardamine hirsuta HOM05D007293 ORTHO05D009143 1.6e-09 66.2 101 48.5
Migut.H00123 Erythranthe guttata HOM05D007293 ORTHO05D009143 2.1e-09 65.9 68 57.4
TPR.G13583 Trifolium pratense HOM05D007293 ORTHO05D009143 2.1e-09 65.9 49 73.5
Carub.0002s1704 Capsella rubella HOM05D007293 ORTHO05D009143 2.7e-09 65.5 98 45.9
Lsat_1_v5_gn_4_182280 Lactuca sativa HOM05D007293 ORTHO05D009143 2.7e-09 65.5 69 55.1
Phvul.002G071600 Phaseolus vulgaris HOM05D007293 ORTHO05D009143 3.6e-09 65.1 49 73.5
AL2G29660 Arabidopsis lyrata HOM05D007293 ORTHO05D009143 6.1e-09 64.3 96 47.9
QL03p061237 Quercus lobata HOM05D007293 ORTHO05D009143 6.1e-09 64.3 64 57.8
AT1G70350 Arabidopsis thaliana HOM05D007293 ORTHO05D009143 8.0e-09 63.9 101 44.6
ECA246G2262 Erigeron canadensis HOM05D007293 ORTHO05D009143 8.0e-09 63.9 50 68.0
Lj2g0011400 Lotus japonicus HOM05D007293 ORTHO05D009143 8.0e-09 63.9 66 62.1
Migut.K01369 Erythranthe guttata HOM05D007293 ORTHO05D009143 1.0e-08 63.5 49 71.4
Thhalv10019350m.g Eutrema salsugineum HOM05D007293 ORTHO05D009143 1.0e-08 63.5 49 65.3
TPR.G13591 Trifolium pratense HOM05D007293 ORTHO05D009143 1.0e-08 63.5 49 73.5
BcaB05g24561 Brassica carinata HOM05D007293 ORTHO05D009143 1.4e-08 63.2 72 54.2
Sp5g25470 Schrenkiella parvula HOM05D007293 ORTHO05D009143 1.4e-08 63.2 48 66.7
Lalb_Chr09g0326381 Lupinus albus HOM05D007293 ORTHO05D009143 1.8e-08 62.8 49 71.4
BcaC03g15179 Brassica carinata HOM05D007293 ORTHO05D009143 2.3e-08 62.4 48 66.7
HPP92_019952 Vanilla planifolia HOM05D007293 ORTHO05D009143 2.3e-08 62.4 49 63.3
BcaB03g15542 Brassica carinata HOM05D007293 ORTHO05D009143 3.0e-08 62.0 49 69.4
Actinidia06026 Actinidia chinensis HOM05D007293 ORTHO05D009143 4.0e-08 61.6 47 66.0
DCAR_011205 Daucus carota HOM05D007293 ORTHO05D009143 5.2e-08 61.2 97 48.5
C06p36130 Brassica napus HOM05D007293 ORTHO05D009143 6.7e-08 60.8 92 44.6
Duzib251G0045 Durio zibethinus HOM05D007293 ORTHO05D009143 6.7e-08 60.8 65 53.8
Oeu062917.1 Olea europaea HOM05D007293 ORTHO05D009143 6.7e-08 60.8 92 41.3
Psat0s2875g0160 Pisum sativum HOM05D007293 ORTHO05D009143 8.8e-08 60.5 49 71.4
Psat2g106240 Pisum sativum HOM05D007293 ORTHO05D009143 8.8e-08 60.5 49 71.4
Haze_12178 Corylus avellana HOM05D007293 ORTHO05D009143 1.5e-07 59.7 85 49.4
Prupe.5G015600 Prunus persica HOM05D007293 ORTHO05D009143 1.5e-07 59.7 47 68.1
BolC6t38732H Brassica oleracea HOM05D007293 ORTHO05D009143 2.0e-07 59.3 92 43.5
COL.COLO4_36768 Corchorus olitorius HOM05D007293 ORTHO05D009143 2.0e-07 59.3 93 46.2
A02p16490 Brassica napus HOM05D007293 ORTHO05D009143 3.3e-07 58.5 47 63.8
C02p27590 Brassica napus HOM05D007293 ORTHO05D009143 3.3e-07 58.5 47 63.8
BraA02t06707Z Brassica rapa HOM05D007293 ORTHO05D009143 3.3e-07 58.5 47 63.8
vmacro05819 Vaccinium macrocarpon HOM05D007293 ORTHO05D009143 3.3e-07 58.5 104 42.3
BolC2t08814H Brassica oleracea HOM05D007293 ORTHO05D009143 4.4e-07 58.2 47 63.8
GSVIVG01032483001 Vitis vinifera HOM05D007293 ORTHO05D009143 4.4e-07 58.2 48 64.6
PSO063G5020 Papaver somniferum HOM05D007293 ORTHO05D009143 5.7e-07 57.8 46 67.4
SalBow1G2453 Salvia bowleyana HOM05D005882 ORTHO05D009143 5.7e-07 57.8 96 40.6
CSS0049977 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 7.5e-07 57.4 56 53.6
PSO832G1108 Papaver somniferum HOM05D007293 ORTHO05D009143 9.7e-07 57.0 45 68.9
CsaV3_4G037870 Cucumis sativus L. HOM05D001719 ORTHO05D008883 1.3e-06 56.6 91 42.9
Os01g0738000 Oryza sativa ssp. japonica HOM05D007293 ORTHO05D009143 1.3e-06 56.6 50 64.0
CSS0016211 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 1.7e-06 56.2 57 52.6
Cc07_g02290 Coffea canephora HOM05D007293 ORTHO05D009143 1.7e-06 56.2 103 42.7
VMungo1215G2593 Vigna mungo HOM05D007293 ORTHO05D009143 2.2e-06 55.8 44 70.5
Rhsim10G0022800 Rhododendron simsii HOM05D007293 ORTHO05D009143 2.8e-06 55.5 41 65.9
SEGI_29263 Sequoiadendron giganteum HOM05D006762 ORTHO05D003505 2.8e-06 55.5 50 56.0
CSS0001505 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 3.7e-06 55.1 98 41.8
Thecc.09G041400 Theobroma cacao HOM05D007491 ORTHO05D009489 3.7e-06 55.1 63 44.4


User provided reference genes

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