Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2488 Ceratophyllum demersum HOM05D006025 ORTHO05D008547 5.5e-81 304.3 160 100.0
COL.COLO4_36182 Corchorus olitorius HOM05D006025 ORTHO05D008547 2.2e-37 159.5 179 51.4
AUR62026262 Chenopodium quinoa HOM05D006025 ORTHO05D008547 1.4e-36 156.8 182 49.5
FvH4_4g32070 Fragaria vesca HOM05D006025 ORTHO05D008547 1.9e-36 156.4 178 48.9
TAR481G0011 Trochodendron aralioides HOM05D006025 ORTHO05D008547 1.9e-36 156.4 178 51.1
FAN22G0508 Fragaria x ananassa HOM05D006025 ORTHO05D008547 3.2e-36 155.6 178 48.9
EL10Ac6g13142 Beta vulgaris HOM05D006025 ORTHO05D008547 4.2e-36 155.2 181 48.6
FAN12G1990 Fragaria x ananassa HOM05D006025 ORTHO05D008547 4.2e-36 155.2 178 48.3
Prupe.1G267200 Prunus persica HOM05D006025 ORTHO05D008547 4.2e-36 155.2 178 48.9
Thecc.02G232800 Theobroma cacao HOM05D006025 ORTHO05D008547 4.2e-36 155.2 178 49.4
FAN07G0827 Fragaria x ananassa HOM05D006025 ORTHO05D008547 5.4e-36 154.8 178 48.3
Manes.05G096000 Manihot esculenta HOM05D006025 ORTHO05D008547 5.4e-36 154.8 176 50.0
Dinv34195 Davidia involucrata HOM05D006025 ORTHO05D008547 7.1e-36 154.5 173 50.3
MD13G1079600 Malus domestica HOM05D006025 ORTHO05D008547 7.1e-36 154.5 175 51.4
ATR0665G167 Amborella trichopoda HOM05D006025 ORTHO05D008547 9.3e-36 154.1 175 50.9
Phvul.002G080900 Phaseolus vulgaris HOM05D006025 ORTHO05D008547 9.3e-36 154.1 179 48.6
Lalb_Chr05g0217521 Lupinus albus HOM05D006025 ORTHO05D008547 1.2e-35 153.7 178 49.4
AUR62026454 Chenopodium quinoa HOM05D006025 ORTHO05D008547 1.6e-35 153.3 182 50.0
A06p43550 Brassica napus HOM05D006025 ORTHO05D008547 2.7e-35 152.5 192 47.9
BraA06t27240Z Brassica rapa HOM05D006025 ORTHO05D008547 2.7e-35 152.5 192 47.9
BcaC06g34048 Brassica carinata HOM05D006025 ORTHO05D008547 3.5e-35 152.1 192 49.5
C07p33300 Brassica napus HOM05D006025 ORTHO05D008547 3.5e-35 152.1 192 49.5
Glyma.01G040500 Glycine max HOM05D006025 ORTHO05D008547 3.5e-35 152.1 177 49.2
Cfa009042 Carpinus fangiana HOM05D006025 ORTHO05D008547 6.0e-35 151.4 175 48.6
DCAR_024490 Daucus carota HOM05D006025 ORTHO05D008547 7.8e-35 151.0 176 47.7
Os03g0800500 Oryza sativa ssp. japonica HOM05D006025 ORTHO05D008547 7.8e-35 151.0 194 45.9
PSO478G1322 Papaver somniferum HOM05D006025 ORTHO05D008547 7.8e-35 151.0 192 46.9
VMungo1215G1908 Vigna mungo HOM05D006025 ORTHO05D008547 7.8e-35 151.0 177 49.7
BcaC06g31223 Brassica carinata HOM05D006025 ORTHO05D008547 1.0e-34 150.6 192 48.4
Nitab4.5_0000679g0100 Nicotiana tabacum HOM05D006025 ORTHO05D008547 1.0e-34 150.6 175 46.9
Rhsim12G0129700 Rhododendron simsii HOM05D006025 ORTHO05D008547 1.0e-34 150.6 178 48.9
Actinidia31175 Actinidia chinensis HOM05D006025 ORTHO05D008547 1.3e-34 150.2 178 48.3
Carub.0005s0158 Capsella rubella HOM05D006025 ORTHO05D008547 1.3e-34 150.2 192 47.4
Lj6A795T74 Lonicera japonica HOM05D006025 ORTHO05D008547 1.3e-34 150.2 175 46.3
Sabra10G0030400 Salix brachista HOM05D006025 ORTHO05D008547 1.3e-34 150.2 175 48.6
Medtr5g037600 Medicago truncatula HOM05D006025 ORTHO05D008547 1.7e-34 149.8 175 49.7
Hund25274 Selenicereus undatus HOM05D006025 ORTHO05D008547 1.7e-34 149.8 173 48.0
Thhalv10004613m.g Eutrema salsugineum HOM05D006025 ORTHO05D008547 2.3e-34 149.4 192 46.9
PGR119G0173 Punica granatum HOM05D006025 ORTHO05D008547 2.3e-34 149.4 177 49.2
AL5G11850 Arabidopsis lyrata HOM05D006025 ORTHO05D008547 3.0e-34 149.1 192 46.4
Potri.010G034400 Populus trichocarpa HOM05D006025 ORTHO05D008547 3.0e-34 149.1 176 48.9
arahy.Tifrunner.gnm1.ann1.V5YJYF Arachis hypogaea HOM05D006025 ORTHO05D008547 3.9e-34 148.7 175 49.7
BolC7t43841H Brassica oleracea HOM05D006025 ORTHO05D008547 3.9e-34 148.7 192 48.4
TWI18G0579 Tripterygium wilfordii HOM05D006025 ORTHO05D008547 3.9e-34 148.7 178 48.3
arahy.Tifrunner.gnm1.ann1.1ZL8TB Arachis hypogaea HOM05D006025 ORTHO05D008547 5.1e-34 148.3 175 49.1
MD16G1079500 Malus domestica HOM05D006025 ORTHO05D008547 5.1e-34 148.3 192 46.4
Gorai.009G347000 Gossypium raimondii HOM05D006025 ORTHO05D008547 6.6e-34 147.9 175 48.0
Gohir.A05G321100 Gossypium hirsutum HOM05D006025 ORTHO05D008547 8.7e-34 147.5 175 47.4
QL03p065944 Quercus lobata HOM05D006025 ORTHO05D008547 8.7e-34 147.5 176 47.2
Sc11g0001660 Simmondsia chinensis HOM05D006025 ORTHO05D008547 8.7e-34 147.5 177 46.9
AT2G02590 Arabidopsis thaliana HOM05D006025 ORTHO05D008547 1.1e-33 147.1 192 46.4
CAN.G27.7 Capsicum annuum HOM05D006025 ORTHO05D008547 1.1e-33 147.1 178 46.1
Cpa.g.sc73.14 Carica papaya HOM05D006025 ORTHO05D008547 1.1e-33 147.1 177 47.5
Ciclev10032129m.g Citrus clementina HOM05D006025 ORTHO05D008547 1.1e-33 147.1 175 47.4
Gohir.D05G323300 Gossypium hirsutum HOM05D006025 ORTHO05D008547 1.1e-33 147.1 175 47.4
MBI04_g22196_MAGBIO Magnolia biondii HOM05D006025 ORTHO05D008547 1.1e-33 147.1 190 47.4
CSS0050443 Camellia sinensis var. sinensis HOM05D006025 ORTHO05D008547 1.5e-33 146.7 177 46.3
Migut.E00118 Erythranthe guttata HOM05D006025 ORTHO05D008547 1.9e-33 146.4 175 47.4
Sp2g13810 Schrenkiella parvula HOM05D006025 ORTHO05D008547 1.9e-33 146.4 192 46.4
RcHm_v2.0_Chr4g0440761 Rosa chinensis HOM05D006025 ORTHO05D008547 2.5e-33 146.0 178 46.1
TPR.G26717 Trifolium pratense HOM05D006025 ORTHO05D008547 3.3e-33 145.6 173 49.7
CANSAT78G1034 Cannabis sativa HOM05D006025 ORTHO05D008547 4.3e-33 145.2 175 48.0
Ah.03g132040 Amaranthus hybridus HOM05D006025 ORTHO05D008547 5.6e-33 144.8 181 47.0
Migut.L01348 Erythranthe guttata HOM05D006025 ORTHO05D008547 5.6e-33 144.8 172 48.3
Lj2g0002167 Lotus japonicus HOM05D006025 ORTHO05D008547 5.6e-33 144.8 173 49.1
CiPaw.05G140400 Carya illinoinensis HOM05D006025 ORTHO05D008547 7.3e-33 144.4 172 46.5
A09p23920 Brassica napus HOM05D006025 ORTHO05D008547 9.6e-33 144.1 192 44.8
HanXRQChr15g0478181 Helianthus annuus HOM05D006025 ORTHO05D008547 9.6e-33 144.1 181 46.4
BraA09t37996Z Brassica rapa HOM05D006025 ORTHO05D008547 1.3e-32 143.7 190 45.3
SalBow8G3437 Salvia bowleyana HOM05D006025 ORTHO05D008547 2.1e-32 142.9 174 46.6
ClCG05G024630 Citrullus lanatus HOM05D006025 ORTHO05D008547 2.8e-32 142.5 192 44.3
Atru.chr11.1861 Acer truncatum HOM05D006025 ORTHO05D008547 3.6e-32 142.1 176 47.2
Ca_04692_v3 Cicer arietinum L. HOM05D006025 ORTHO05D008547 3.6e-32 142.1 173 49.7
CsaV3_5G032300 Cucumis sativus L. HOM05D006025 ORTHO05D008547 3.6e-32 142.1 173 46.8
Sed0022227 Sechium edule HOM05D006025 ORTHO05D008547 3.6e-32 142.1 173 47.4
ECA246G2177 Erigeron canadensis HOM05D006025 ORTHO05D008547 6.2e-32 141.4 179 45.8
Nn4g23031 Nelumbo nucifera HOM05D006025 ORTHO05D008547 6.2e-32 141.4 176 45.5
MELO3C012062.2 Cucumis melo HOM05D006025 ORTHO05D008547 1.1e-31 140.6 173 46.8
Aa31LG2G7560 Aethionema arabicum HOM05D006025 ORTHO05D008547 2.4e-31 139.4 192 44.3
C09p30780 Brassica napus HOM05D006025 ORTHO05D008547 2.4e-31 139.4 192 44.8
HanXRQChr17g0544581 Helianthus annuus HOM05D006025 ORTHO05D008547 3.1e-31 139.0 179 44.1
Lsat_1_v5_gn_3_49700 Lactuca sativa HOM05D006025 ORTHO05D008547 4.0e-31 138.7 181 44.8
BcaC04g21520 Brassica carinata HOM05D006025 ORTHO05D008547 9.0e-31 137.5 192 44.3
BolC9t55941H Brassica oleracea HOM05D006025 ORTHO05D008547 2.0e-30 136.3 185 45.4
SEGI_16485 Sequoiadendron giganteum HOM05D006025 ORTHO05D008547 2.6e-30 136.0 179 44.7
THA.LOC104805137 Tarenaya hassleriana HOM05D000131 ORTHO05D000086 2.6e-30 136.0 173 45.7
GSVIVG01020079001 Vitis vinifera HOM05D006025 ORTHO05D008547 2.6e-30 136.0 175 45.1
vmacro16324 Vaccinium macrocarpon HOM05D006025 ORTHO05D008547 3.4e-30 135.6 219 40.2
Psat2g115440 Pisum sativum HOM05D006025 ORTHO05D008547 2.9e-29 132.5 173 46.2
Duzib268G1145 Durio zibethinus HOM05D006025 ORTHO05D008547 4.9e-29 131.7 160 47.5
CARHR145110 Cardamine hirsuta HOM05D006025 ORTHO05D008547 8.4e-29 131.0 192 42.2
Cc11_g13550 Coffea canephora HOM05D006025 ORTHO05D008547 8.4e-29 131.0 178 42.7
Oeu044566.1 Olea europaea HOM05D006025 ORTHO05D008547 1.0e-26 124.0 154 46.1
MSTRG.7831 Avicennia marina HOM05D006025 ORTHO05D008547 8.7e-26 120.9 154 46.8
BcaB07g30697 Brassica carinata HOM05D006025 ORTHO05D008547 1.9e-25 119.8 167 45.5
Aqoxy3G00786 Aquilegia oxysepala HOM05D006025 ORTHO05D008547 2.5e-25 119.4 178 41.6
unitig_62.g23684 Utricularia gibba HOM05D006025 ORTHO05D008547 5.6e-25 118.2 215 37.7
Mapoly0001s0092 Marchantia polymorpha HOM05D006025 ORTHO05D008547 9.6e-25 117.5 178 38.8
SMO147G0037 Selaginella moellendorffii HOM05D006025 ORTHO05D008547 9.6e-25 117.5 169 42.6
AagrBONN_evm.TU.Sc2ySwM_117.678 Anthoceros agrestis HOM05D006025 ORTHO05D008547 2.1e-24 116.3 178 39.3
CDE07G0470 Ceratophyllum demersum HOM05D006025 ORTHO05D008547 4.8e-24 115.2 131 52.7
Zm00001eb212770 Zea mays HOM05D006025 ORTHO05D008547 8.1e-24 114.4 181 38.1
Sopen05g002930 Solanum pennellii HOM05D006025 ORTHO05D008547 1.8e-23 113.2 172 40.7
Haze_12072 Corylus avellana HOM05D006025 ORTHO05D008547 3.1e-23 112.5 153 45.1
CBR_g39595 Chara braunii HOM05D006025 ORTHO05D008547 5.8e-22 108.2 196 36.2
Pp3c22_2360 Physcomitrium patens HOM05D006025 ORTHO05D008547 1.3e-21 107.1 175 41.1
PGSC0003DMG400017619 Solanum tuberosum HOM05D006025 ORTHO05D008547 2.2e-21 106.3 172 39.5
Eucgr.B02589 Eucalyptus grandis HOM05D006025 ORTHO05D008547 4.9e-21 105.1 139 46.0
Nitab4.5_0002969g0040 Nicotiana tabacum HOM05D006025 ORTHO05D008547 1.1e-20 104.0 177 37.3
SalBow2G1916 Salvia bowleyana HOM05D006025 ORTHO05D008547 1.1e-20 104.0 172 38.4
Solyc05g006965.1 Solanum lycopersicum HOM05D006025 ORTHO05D008547 1.4e-20 103.6 130 44.6
Peaxi162Scf00209g00517 Petunia axillaris HOM05D006025 ORTHO05D008547 1.9e-20 103.2 177 37.9
HPP92_018837 Vanilla planifolia HOM05D006025 ORTHO05D008547 2.7e-19 99.4 80 67.5
SGA_v2.0_scaffold87G26972 Striga asiatica HOM05D006025 ORTHO05D008547 1.9e-17 93.2 177 34.5
SEGI_34054 Sequoiadendron giganteum HOM05D006025 ORTHO05D008547 5.3e-15 85.1 72 62.5
Glyma.02G024100 Glycine max HOM05D006025 ORTHO05D008547 6.7e-10 68.2 54 61.1
Hma1.2p1_0808F.1_g221580 Hydrangea macrophylla HOM05D006025 ORTHO05D008547 1.1e-07 60.8 42 59.5
Hma1.2p1_0513F.1_g169540 Hydrangea macrophylla HOM05D006025 ORTHO05D008547 1.4e-07 60.5 42 59.5
DCAR_001229 Daucus carota HOM05D006025 ORTHO05D008547 1.2e-06 57.4 47 63.8


User provided reference genes

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