Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2446 Ceratophyllum demersum HOM05D002526 ORTHO05D004039 3.2e-158 561.6 264 100.0
TAR383G0153 Trochodendron aralioides HOM05D002526 ORTHO05D004039 1.2e-69 267.3 285 50.2
CiPaw.07G224000 Carya illinoinensis HOM05D002526 ORTHO05D004039 1.4e-68 263.8 279 49.1
Thecc.09G023400 Theobroma cacao HOM05D002526 ORTHO05D004039 6.8e-68 261.5 285 45.3
Haze_21504 Corylus avellana HOM05D002526 ORTHO05D004039 3.4e-67 259.2 279 47.7
Nitab4.5_0002408g0010 Nicotiana tabacum HOM05D002526 ORTHO05D004039 5.8e-67 258.5 290 48.3
Duzib150G0097 Durio zibethinus HOM05D002526 ORTHO05D004039 9.8e-67 257.7 283 45.9
MBI15_g03382_MAGBIO Magnolia biondii HOM05D002526 ORTHO05D004039 9.8e-67 257.7 289 47.4
Duzib168G1931 Durio zibethinus HOM05D002526 ORTHO05D004039 1.7e-66 256.9 278 46.8
Prupe.1G482100 Prunus persica HOM05D002526 ORTHO05D004039 3.7e-66 255.8 279 47.0
Peaxi162Scf01131g00116 Petunia axillaris HOM05D002526 ORTHO05D004039 4.9e-66 255.4 287 47.4
Actinidia22335 Actinidia chinensis HOM05D002526 ORTHO05D004039 6.4e-66 255.0 292 45.9
FAN15G1565 Fragaria x ananassa HOM05D002526 ORTHO05D004039 6.4e-66 255.0 284 46.8
Dinv08634 Davidia involucrata HOM05D002526 ORTHO05D004039 4.1e-65 252.3 279 47.3
TAR626G1496 Trochodendron aralioides HOM05D002526 ORTHO05D004039 4.1e-65 252.3 279 46.6
FvH4_2g28950 Fragaria vesca HOM05D002526 ORTHO05D004039 7.0e-65 251.5 284 46.8
FAN24G0483 Fragaria x ananassa HOM05D002526 ORTHO05D004039 7.0e-65 251.5 284 46.8
CSS0021236 Camellia sinensis var. sinensis HOM05D002526 ORTHO05D004039 9.2e-65 251.1 279 48.0
FAN20G0422 Fragaria x ananassa HOM05D002526 ORTHO05D004039 1.6e-64 250.4 284 46.1
RcHm_v2.0_Chr6g0297781 Rosa chinensis HOM05D002526 ORTHO05D004039 2.0e-64 250.0 284 45.1
FAN27G2575 Fragaria x ananassa HOM05D002526 ORTHO05D004039 2.7e-64 249.6 284 46.5
Potri.018G026400 Populus trichocarpa HOM05D002526 ORTHO05D004039 4.6e-64 248.8 274 46.7
Cfa013135 Carpinus fangiana HOM05D002526 ORTHO05D004039 6.0e-64 248.4 279 47.3
Eucgr.C02764 Eucalyptus grandis HOM05D002526 ORTHO05D004039 6.0e-64 248.4 285 44.6
Nitab4.5_0002042g0080 Nicotiana tabacum HOM05D002526 ORTHO05D004039 6.0e-64 248.4 287 47.4
CSS0025449 Camellia sinensis var. sinensis HOM05D002526 ORTHO05D004039 1.7e-63 246.9 285 45.6
TWI63G1025 Tripterygium wilfordii HOM05D002526 ORTHO05D004039 2.3e-63 246.5 282 45.7
Aqoxy5G04051 Aquilegia oxysepala HOM05D002526 ORTHO05D004039 3.0e-63 246.1 284 46.1
MD15G1126200 Malus domestica HOM05D002526 ORTHO05D004039 3.0e-63 246.1 291 45.7
Ciclev10007749m.g Citrus clementina HOM05D002526 ORTHO05D004039 1.5e-62 243.8 285 44.9
Hma1.2p1_0728F.1_g209320 Hydrangea macrophylla HOM05D002526 ORTHO05D004039 1.9e-62 243.4 290 46.2
Rhsim02G0202200 Rhododendron simsii HOM05D002526 ORTHO05D004039 1.9e-62 243.4 275 46.9
vmacro11180 Vaccinium macrocarpon HOM05D002526 ORTHO05D004039 2.5e-62 243.0 275 46.2
vmacro19002 Vaccinium macrocarpon HOM05D002526 ORTHO05D004039 2.5e-62 243.0 285 44.6
CiPaw.08G010500 Carya illinoinensis HOM05D002526 ORTHO05D004039 5.6e-62 241.9 276 45.3
Oeu010901.1 Olea europaea HOM05D002526 ORTHO05D004039 5.6e-62 241.9 275 45.1
Nn8g39521 Nelumbo nucifera HOM05D002526 ORTHO05D004039 7.3e-62 241.5 277 44.8
Dinv30612 Davidia involucrata HOM05D002526 ORTHO05D004039 9.5e-62 241.1 290 44.5
Gohir.D05G057600 Gossypium hirsutum HOM05D002526 ORTHO05D004039 9.5e-62 241.1 278 45.0
Gohir.A05G055500 Gossypium hirsutum HOM05D002526 ORTHO05D004039 2.1e-61 240.0 280 44.6
QL02p021463 Quercus lobata HOM05D002526 ORTHO05D004039 2.1e-61 240.0 287 45.3
Sabra06G0200000 Salix brachista HOM05D002526 ORTHO05D004039 2.1e-61 240.0 276 46.0
Gorai.009G058700 Gossypium raimondii HOM05D002526 ORTHO05D004039 2.8e-61 239.6 280 45.0
Oeu033133.1 Olea europaea HOM05D002526 ORTHO05D004039 4.7e-61 238.8 275 46.9
SalBow4G1093 Salvia bowleyana HOM05D002526 ORTHO05D004039 4.7e-61 238.8 279 45.2
Cc08_g00510 Coffea canephora HOM05D002526 ORTHO05D004039 6.2e-61 238.4 279 43.7
PSO017G2139 Papaver somniferum HOM05D002526 ORTHO05D004039 1.1e-60 237.7 284 45.1
Manes.04G112150 Manihot esculenta HOM05D002526 ORTHO05D004039 1.4e-60 237.3 282 42.6
Potri.006G255700 Populus trichocarpa HOM05D002526 ORTHO05D004039 2.3e-60 236.5 274 45.3
Cpa.g.sc217.9 Carica papaya HOM05D002526 ORTHO05D004039 4.0e-60 235.7 285 43.2
DCAR_001540 Daucus carota HOM05D002526 ORTHO05D004039 4.0e-60 235.7 291 43.3
Os06g0639500 Oryza sativa ssp. japonica HOM05D002526 ORTHO05D004039 6.8e-60 235.0 281 43.8
ATR0800G085 Amborella trichopoda HOM05D002526 ORTHO05D004039 1.5e-59 233.8 284 45.4
Lj8A705T45 Lonicera japonica HOM05D002526 ORTHO05D004039 3.4e-59 232.6 284 43.7
Prupe.3G088500 Prunus persica HOM05D002526 ORTHO05D004039 3.4e-59 232.6 279 44.1
GSVIVG01035870001 Vitis vinifera HOM05D002526 ORTHO05D004039 3.4e-59 232.6 278 43.5
MD17G1213100 Malus domestica HOM05D002526 ORTHO05D004039 5.8e-59 231.9 286 44.4
Actinidia01741 Actinidia chinensis HOM05D002526 ORTHO05D004039 1.3e-58 230.7 282 42.6
ClCG05G016820 Citrullus lanatus HOM05D002526 ORTHO05D004039 1.7e-58 230.3 280 43.9
DCAR_025516 Daucus carota HOM05D002526 ORTHO05D004039 2.2e-58 229.9 283 43.8
Sabra18G0028900 Salix brachista HOM05D002526 ORTHO05D004039 2.2e-58 229.9 274 43.8
arahy.Tifrunner.gnm1.ann1.V3VQ7T Arachis hypogaea HOM05D002526 ORTHO05D004039 6.4e-58 228.4 290 43.1
Migut.A00034 Erythranthe guttata HOM05D002526 ORTHO05D004039 6.4e-58 228.4 234 48.7
Psat6g029080 Pisum sativum HOM05D002526 ORTHO05D004039 6.4e-58 228.4 291 43.3
MELO3C003705.2 Cucumis melo HOM05D002526 ORTHO05D004039 8.3e-58 228.0 281 43.4
Lj5g0016331 Lotus japonicus HOM05D002526 ORTHO05D004039 1.1e-57 227.6 298 43.0
Manes.03G013800 Manihot esculenta HOM05D002526 ORTHO05D004039 1.4e-57 227.3 287 43.2
CANSAT56G3976 Cannabis sativa HOM05D002526 ORTHO05D004039 1.9e-57 226.9 285 44.6
GSVIVG01017348001 Vitis vinifera HOM05D002526 ORTHO05D004039 1.9e-57 226.9 233 48.1
Medtr1g012610 Medicago truncatula HOM05D002526 ORTHO05D004039 2.4e-57 226.5 294 42.9
Haze_16568 Corylus avellana HOM05D002526 ORTHO05D004039 5.4e-57 225.3 289 42.6
Zm00001eb387270 Zea mays HOM05D002526 ORTHO05D004039 5.4e-57 225.3 281 45.6
arahy.Tifrunner.gnm1.ann1.JLJY7Q Arachis hypogaea HOM05D002526 ORTHO05D004039 7.1e-57 224.9 290 42.8
DCAR_025597 Daucus carota HOM05D002526 ORTHO05D004039 7.1e-57 224.9 283 43.1
PSO170G0531 Papaver somniferum HOM05D002526 ORTHO05D004039 7.1e-57 224.9 289 42.2
Sed0014976 Sechium edule HOM05D002526 ORTHO05D004039 7.1e-57 224.9 283 42.4
Ca_13032_v3 Cicer arietinum L. HOM05D002526 ORTHO05D004039 9.2e-57 224.6 284 42.6
QL03p020405 Quercus lobata HOM05D002526 ORTHO05D004039 9.2e-57 224.6 294 40.1
QL05p030840 Quercus lobata HOM05D002526 ORTHO05D004039 9.2e-57 224.6 294 40.1
Thecc.06G028500 Theobroma cacao HOM05D002526 ORTHO05D004039 9.2e-57 224.6 272 43.4
Lj5A73T72 Lonicera japonica HOM05D002526 ORTHO05D004039 1.6e-56 223.8 285 40.7
SGA_v2.0_scaffold20G09110 Striga asiatica HOM05D002526 ORTHO05D004039 1.6e-56 223.8 275 43.6
HanXRQChr13g0403061 Helianthus annuus HOM05D002526 ORTHO05D004039 3.5e-56 222.6 291 42.6
CsaV3_3G046340 Cucumis sativus L. HOM05D002526 ORTHO05D004039 6.0e-56 221.9 282 42.6
Thhalv10024659m.g Eutrema salsugineum HOM05D002526 ORTHO05D004039 7.8e-56 221.5 272 43.0
TWI75G1436 Tripterygium wilfordii HOM05D002526 ORTHO05D004039 1.7e-55 220.3 282 42.2
Carub.0007s0835 Capsella rubella HOM05D002526 ORTHO05D004039 3.0e-55 219.5 275 43.6
Phvul.009G092300 Phaseolus vulgaris HOM05D002526 ORTHO05D004039 3.0e-55 219.5 277 40.8
Sc06g0000660 Simmondsia chinensis HOM05D002526 ORTHO05D004039 5.1e-55 218.8 289 41.9
ECA233G5282 Erigeron canadensis HOM05D002526 ORTHO05D004039 6.6e-55 218.4 294 41.8
Glyma.04G065900 Glycine max HOM05D002526 ORTHO05D004039 6.6e-55 218.4 278 43.5
Atru.chr7.2442 Acer truncatum HOM05D002526 ORTHO05D004039 8.6e-55 218.0 233 45.9
FAN15G3613 Fragaria x ananassa HOM05D002526 ORTHO05D004039 8.6e-55 218.0 282 43.6
AL7G19620 Arabidopsis lyrata HOM05D002526 ORTHO05D004039 1.5e-54 217.2 273 43.2
C01p06770 Brassica napus HOM05D002526 ORTHO05D004039 1.5e-54 217.2 279 43.0
BolC1t00669H Brassica oleracea HOM05D002526 ORTHO05D004039 1.5e-54 217.2 279 43.0
BcaC09g52006 Brassica carinata HOM05D002526 ORTHO05D004039 1.9e-54 216.9 279 43.0
Glyma.17G211700 Glycine max HOM05D002526 ORTHO05D004039 3.3e-54 216.1 265 43.0
VMungo1309G0620 Vigna mungo HOM05D002526 ORTHO05D004039 3.3e-54 216.1 279 41.6
Lalb_Chr24g0402131 Lupinus albus HOM05D002526 ORTHO05D004039 4.3e-54 215.7 290 41.4
CiPaw.01G248800 Carya illinoinensis HOM05D002526 ORTHO05D004039 7.3e-54 214.9 278 41.0
COL.COLO4_11933 Corchorus olitorius HOM05D002526 ORTHO05D004039 7.3e-54 214.9 272 39.7
BcaNung03145 Brassica carinata HOM05D002526 ORTHO05D004039 9.5e-54 214.5 272 43.4
Cpa.g.sc938.2 Carica papaya HOM05D002526 ORTHO05D004039 9.5e-54 214.5 282 41.1
Lsat_1_v5_gn_5_131501 Lactuca sativa HOM05D002526 ORTHO05D004039 1.2e-53 214.2 282 41.5
Manes.16G122800 Manihot esculenta HOM05D002526 ORTHO05D004039 1.2e-53 214.2 266 40.6
Nitab4.5_0002202g0050 Nicotiana tabacum HOM05D000238 ORTHO05D004039 1.2e-53 214.2 278 40.6
A01p06140 Brassica napus HOM05D002526 ORTHO05D004039 2.8e-53 213.0 272 43.0
BraA01t00577Z Brassica rapa HOM05D002526 ORTHO05D004039 2.8e-53 213.0 272 43.0
Nitab4.5_0002905g0010 Nicotiana tabacum HOM05D002526 ORTHO05D004039 2.8e-53 213.0 279 39.8
MSTRG.11145 Avicennia marina HOM05D002526 ORTHO05D004039 3.6e-53 212.6 288 41.0
Glyma.06G067300 Glycine max HOM05D002526 ORTHO05D004039 3.6e-53 212.6 278 42.1
Oeu053118.1 Olea europaea HOM05D002526 ORTHO05D004039 3.6e-53 212.6 244 42.2
HanXRQChr10g0302851 Helianthus annuus HOM05D002526 ORTHO05D004039 6.2e-53 211.8 285 40.4
Sp7g30000 Schrenkiella parvula HOM05D002526 ORTHO05D004039 6.2e-53 211.8 272 43.0
Cc04_g04440 Coffea canephora HOM05D002526 ORTHO05D004039 1.1e-52 211.1 248 44.8
AT4G32250 Arabidopsis thaliana HOM05D002526 ORTHO05D004039 1.4e-52 210.7 269 42.4
CAN.G282.95 Capsicum annuum HOM05D002526 ORTHO05D004039 1.8e-52 210.3 278 42.1
Duzib235G0559 Durio zibethinus HOM05D002526 ORTHO05D004039 1.8e-52 210.3 275 41.1
Peaxi162Scf00349g00002 Petunia axillaris HOM05D002526 ORTHO05D004039 4.0e-52 209.1 279 40.1
Sopen01g001070 Solanum pennellii HOM05D002526 ORTHO05D004039 4.0e-52 209.1 279 39.4
ECA234G3945 Erigeron canadensis HOM05D002526 ORTHO05D004039 5.2e-52 208.8 283 41.3
Solyc01g005030.4 Solanum lycopersicum HOM05D000238 ORTHO05D004039 5.2e-52 208.8 279 39.4
AUR62031530 Chenopodium quinoa HOM05D002526 ORTHO05D004039 6.8e-52 208.4 264 43.9
AUR62012409 Chenopodium quinoa HOM05D002526 ORTHO05D004039 8.9e-52 208.0 264 43.6
EL10Ac2g04203 Beta vulgaris HOM05D002526 ORTHO05D004039 1.2e-51 207.6 257 43.6
SEGI_38229 Sequoiadendron giganteum HOM05D002526 ORTHO05D004039 2.6e-51 206.5 288 42.4
PGSC0003DMG400022766 Solanum tuberosum HOM05D002526 ORTHO05D004039 7.6e-51 204.9 279 39.1
PGR031G2915 Punica granatum HOM05D002526 ORTHO05D004039 1.3e-50 204.1 287 39.4
BcaB03g12735 Brassica carinata HOM05D002526 ORTHO05D004039 1.7e-50 203.8 279 40.5
THA.LOC104818615 Tarenaya hassleriana HOM05D002526 ORTHO05D004039 1.7e-50 203.8 271 41.3
VMungo0647G2226 Vigna mungo HOM05D002526 ORTHO05D004039 1.7e-50 203.8 294 37.4
SalBow2G3132 Salvia bowleyana HOM05D002526 ORTHO05D004039 6.4e-50 201.8 296 37.5
BcaC01g01034 Brassica carinata HOM05D002526 ORTHO05D004039 1.4e-49 200.7 271 41.0
C03p87430 Brassica napus HOM05D002526 ORTHO05D004039 1.4e-49 200.7 271 41.0
FAN14G1931 Fragaria x ananassa HOM05D002526 ORTHO05D004039 2.4e-49 199.9 282 38.3
A08p18280 Brassica napus HOM05D002526 ORTHO05D004039 3.2e-49 199.5 269 40.5
BraA08t33785Z Brassica rapa HOM05D002526 ORTHO05D004039 3.2e-49 199.5 269 40.5
Dinv18210 Davidia involucrata HOM05D002526 ORTHO05D004039 3.2e-49 199.5 277 41.5
BolC3t21052H Brassica oleracea HOM05D002526 ORTHO05D004039 5.4e-49 198.7 275 40.0
FvH4_6g29550 Fragaria vesca HOM05D002526 ORTHO05D004039 7.1e-49 198.4 278 39.2
RcHm_v2.0_Chr2g0135111 Rosa chinensis HOM05D002526 ORTHO05D004039 7.1e-49 198.4 278 39.6
Lalb_Chr08g0244151 Lupinus albus HOM05D002526 ORTHO05D004039 1.2e-48 197.6 231 42.0
HPP92_020090 Vanilla planifolia HOM05D002526 ORTHO05D004039 1.2e-48 197.6 266 43.6
FAN02G3371 Fragaria x ananassa HOM05D002526 ORTHO05D004039 2.1e-48 196.8 278 38.8
FAN09G4722 Fragaria x ananassa HOM05D002526 ORTHO05D004039 3.5e-48 196.1 278 38.8
CARHR240130 Cardamine hirsuta HOM05D002526 ORTHO05D004039 1.0e-47 194.5 269 41.3
FAN05G0514 Fragaria x ananassa HOM05D002526 ORTHO05D004039 1.0e-47 194.5 278 38.5
Gohir.D06G191800 Gossypium hirsutum HOM05D002526 ORTHO05D004039 1.0e-47 194.5 243 39.5
Aa31LG2G17730 Aethionema arabicum HOM05D002526 ORTHO05D004039 1.3e-47 194.1 276 39.1
Gorai.010G225000 Gossypium raimondii HOM05D002526 ORTHO05D004039 1.7e-47 193.7 243 39.5
Gohir.A06G185000 Gossypium hirsutum HOM05D002526 ORTHO05D004039 3.0e-47 193.0 240 39.6
SEGI_14926 Sequoiadendron giganteum HOM05D002526 ORTHO05D004039 5.1e-47 192.2 284 40.5
Lsat_1_v5_gn_6_21201 Lactuca sativa HOM05D002526 ORTHO05D004039 1.1e-46 191.0 287 37.6
Ciclev10024867m.g Citrus clementina HOM05D002526 ORTHO05D004039 2.5e-46 189.9 232 41.4
A08p18290 Brassica napus HOM05D002526 ORTHO05D004039 4.3e-46 189.1 233 42.1
BraA08t33786Z Brassica rapa HOM05D002526 ORTHO05D004039 4.3e-46 189.1 233 42.1
SEGI_40489 Sequoiadendron giganteum HOM05D002526 ORTHO05D004039 1.2e-45 187.6 269 41.6
BolC3t21053H Brassica oleracea HOM05D002526 ORTHO05D004039 3.1e-44 183.0 233 41.2
unitig_748.g8081 Utricularia gibba HOM05D002526 ORTHO05D004039 8.9e-44 181.4 221 43.4
C03p87440 Brassica napus HOM05D002526 ORTHO05D004039 7.6e-43 178.3 233 41.2
Phvul.001G050700 Phaseolus vulgaris HOM05D002526 ORTHO05D004039 7.6e-43 178.3 231 40.7
Atru.chr1.2914 Acer truncatum HOM05D002526 ORTHO05D004039 6.4e-42 175.3 161 52.2
Actinidia28512 Actinidia chinensis HOM05D002526 ORTHO05D004039 5.4e-41 172.2 260 41.2
SGA_v2.0_scaffold5G02703 Striga asiatica HOM05D002526 ORTHO05D004039 7.1e-41 171.8 283 34.3
PGR044G1101 Punica granatum HOM05D002526 ORTHO05D004039 3.5e-40 169.5 277 36.1
Oeu060148.1 Olea europaea HOM05D002526 ORTHO05D004039 4.3e-38 162.5 252 37.7
COL.COLO4_18869 Corchorus olitorius HOM05D002526 ORTHO05D004039 3.1e-36 156.4 277 35.7
Hma1.2p1_0243F.1_g100890 Hydrangea macrophylla HOM05D002526 ORTHO05D004039 2.1e-32 143.7 279 35.1
TPR.G15671 Trifolium pratense HOM05D002526 ORTHO05D004039 7.4e-30 135.2 165 41.8
Nn2g12101 Nelumbo nucifera HOM05D002526 ORTHO05D004039 2.0e-27 127.1 160 44.4
Pp3c19_20230 Physcomitrium patens HOM05D002526 ORTHO05D004039 7.6e-27 125.2 240 31.7
Mapoly0051s0037 Marchantia polymorpha HOM05D002526 ORTHO05D004039 1.2e-24 117.9 131 39.7
AagrBONN_evm.TU.Sc2ySwM_117.2834 Anthoceros agrestis HOM05D002526 ORTHO05D004039 2.7e-24 116.7 187 33.2
SMO143G0194 Selaginella moellendorffii HOM05D002526 ORTHO05D004039 6.0e-24 115.5 188 38.3
Duzib192G0551 Durio zibethinus HOM05D002526 ORTHO05D010157 6.5e-18 95.5 76 51.3
TPR.G40325 Trifolium pratense HOM05D002526 ORTHO05D004039 4.2e-17 92.8 152 36.8
Thecc.01G108200 Theobroma cacao HOM05D002526 ORTHO05D004039 5.1e-15 85.9 69 52.2
Eucgr.L01004 Eucalyptus grandis HOM05D002526 ORTHO05D004039 2.9e-10 70.1 63 54.0
SMO146G0353 Selaginella moellendorffii HOM05D002526 ORTHO05D004039 1.4e-09 67.8 147 32.7
CiPaw.14G112000 Carya illinoinensis HOM05D003550 ORTHO05D004336 3.6e-08 63.2 91 38.5


User provided reference genes

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