Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2408 Ceratophyllum demersum HOM05D007213 ORTHO05D009165 2.0e-290 1001.9 568 100.0
MBI01_g32846_MAGBIO Magnolia biondii HOM05D007213 ORTHO05D009165 7.6e-141 505.0 480 61.0
GSVIVG01013472001 Vitis vinifera HOM05D007213 ORTHO05D009165 3.5e-122 443.0 475 56.0
Cfa014177 Carpinus fangiana HOM05D007213 ORTHO05D009165 1.0e-121 441.4 475 55.2
Aqoxy5G00918 Aquilegia oxysepala HOM05D007213 ORTHO05D009165 3.0e-121 439.9 476 56.1
Nn5g31088 Nelumbo nucifera HOM05D007213 ORTHO05D009165 3.3e-120 436.4 513 52.4
Actinidia15534 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.6e-119 434.1 480 54.0
Dinv05524 Davidia involucrata HOM05D007213 ORTHO05D009165 2.7e-114 416.8 501 53.1
Dinv35497 Davidia involucrata HOM05D007213 ORTHO05D009165 2.7e-114 416.8 557 49.0
CSS0032989 Camellia sinensis var. sinensis HOM05D007213 ORTHO05D009165 5.1e-113 412.5 487 51.5
PSO017G1686 Papaver somniferum HOM05D007213 ORTHO05D009165 2.4e-110 403.7 480 52.5
Haze_22902 Corylus avellana HOM05D007213 ORTHO05D009165 3.1e-110 403.3 475 52.2
PSO170G0484 Papaver somniferum HOM05D007213 ORTHO05D009165 6.9e-110 402.1 518 50.6
Ca_24332_v3 Cicer arietinum L. HOM05D007213 ORTHO05D009165 2.6e-109 400.2 490 50.4
ECA233G0001 Erigeron canadensis HOM05D007213 ORTHO05D009165 5.9e-109 399.1 543 47.3
Glyma.01G245400 Glycine max HOM05D007213 ORTHO05D009165 1.0e-108 398.3 477 48.8
Medtr5g004630 Medicago truncatula HOM05D007213 ORTHO05D009165 1.0e-108 398.3 491 49.5
FAN04G0748 Fragaria x ananassa HOM05D007213 ORTHO05D009165 1.1e-107 394.8 487 51.3
Rhsim06G0000200 Rhododendron simsii HOM05D007213 ORTHO05D009165 7.2e-107 392.1 490 49.0
Ciclev10000432m.g Citrus clementina HOM05D007213 ORTHO05D009165 2.7e-106 390.2 491 50.3
ATR0605G010 Amborella trichopoda HOM05D007213 ORTHO05D009165 3.6e-106 389.8 426 54.0
TPR.G21615 Trifolium pratense HOM05D007213 ORTHO05D009165 3.0e-105 386.7 479 49.5
Actinidia17102 Actinidia chinensis HOM05D007213 ORTHO05D009165 4.4e-104 382.9 480 49.6
Potri.002G000800 Populus trichocarpa HOM05D007213 ORTHO05D009165 9.7e-104 381.7 477 50.7
HanXRQChr07g0204351 Helianthus annuus HOM05D007213 ORTHO05D009165 2.2e-103 380.6 536 46.1
vmacro21731 Vaccinium macrocarpon HOM05D007213 ORTHO05D009165 2.4e-102 377.1 503 46.7
A05p07120 Brassica napus HOM05D007213 ORTHO05D009165 9.1e-102 375.2 489 47.4
BraA05t19677Z Brassica rapa HOM05D007213 ORTHO05D009165 9.1e-102 375.2 489 47.4
FAN18G3120 Fragaria x ananassa HOM05D007213 ORTHO05D009165 9.1e-102 375.2 490 49.6
PGSC0003DMG400025663 Solanum tuberosum HOM05D007213 ORTHO05D009165 1.2e-101 374.8 480 48.8
AUR62042263 Chenopodium quinoa HOM05D007213 ORTHO05D009165 1.0e-100 371.7 490 47.6
Sabra02G0000800 Salix brachista HOM05D007213 ORTHO05D009165 1.0e-100 371.7 477 49.7
AUR62036517 Chenopodium quinoa HOM05D007213 ORTHO05D009165 1.7e-100 370.9 535 45.8
QL02p016552 Quercus lobata HOM05D007213 ORTHO05D009165 1.7e-100 370.9 476 49.6
Lj1g0003700 Lotus japonicus HOM05D007213 ORTHO05D009165 2.9e-100 370.2 496 46.6
Thecc.07G095200 Theobroma cacao HOM05D007213 ORTHO05D009165 1.9e-99 367.5 477 48.8
Peaxi162Scf00385g01231 Petunia axillaris HOM05D007213 ORTHO05D009165 4.2e-99 366.3 483 47.6
Phvul.002G054800 Phaseolus vulgaris HOM05D007213 ORTHO05D009165 4.2e-99 366.3 476 47.1
Lsat_1_v5_gn_8_25680 Lactuca sativa HOM05D007213 ORTHO05D009165 1.2e-98 364.8 533 45.0
Gohir.A04G034000 Gossypium hirsutum HOM05D007213 ORTHO05D009165 1.6e-98 364.4 479 48.6
CAN.G1330.34 Capsicum annuum HOM05D007213 ORTHO05D009165 2.7e-98 363.6 480 47.3
Eucgr.F03636 Eucalyptus grandis HOM05D007213 ORTHO05D009165 2.3e-97 360.5 515 45.2
Gohir.D05G349200 Gossypium hirsutum HOM05D007213 ORTHO05D009165 2.0e-96 357.5 479 48.0
Gorai.009G379100 Gossypium raimondii HOM05D007213 ORTHO05D009165 3.3e-96 356.7 479 48.2
BcaB02g09137 Brassica carinata HOM05D007213 ORTHO05D009165 7.4e-96 355.5 485 46.2
EL10Ac5g11683 Beta vulgaris HOM05D007213 ORTHO05D009165 9.7e-96 355.1 513 45.2
AT5G25070 Arabidopsis thaliana HOM05D007213 ORTHO05D009165 4.8e-95 352.8 485 45.6
AL6G36700 Arabidopsis lyrata HOM05D007213 ORTHO05D009165 3.1e-94 350.1 485 45.6
COL.COLO4_36704 Corchorus olitorius HOM05D007213 ORTHO05D009165 5.3e-94 349.4 478 48.3
THA.LOC104801651 Tarenaya hassleriana HOM05D007213 ORTHO05D009165 4.5e-93 346.3 476 46.6
CANSAT54G2751 Cannabis sativa HOM05D007213 ORTHO05D009165 5.9e-93 345.9 475 47.8
Thhalv10016307m.g Eutrema salsugineum HOM05D007213 ORTHO05D009165 7.7e-93 345.5 490 44.9
Cpa.g.sc36.83 Carica papaya HOM05D007213 ORTHO05D009165 2.9e-92 343.6 476 45.4
FAN08G1354 Fragaria x ananassa HOM05D007213 ORTHO05D009165 8.5e-92 342.0 487 47.2
Psat4g219720 Pisum sativum HOM05D007213 ORTHO05D009165 5.5e-91 339.3 466 46.1
Sed0002482 Sechium edule HOM05D007213 ORTHO05D009165 2.7e-90 337.0 477 44.9
Sp4g21590 Schrenkiella parvula HOM05D007213 ORTHO05D009165 3.6e-90 336.7 476 44.3
SpUn0018_0080 Schrenkiella parvula HOM05D007213 ORTHO05D009165 3.6e-90 336.7 476 44.3
CARHR285120 Cardamine hirsuta HOM05D007213 ORTHO05D009165 4.7e-90 336.3 485 44.7
BolC4t22448H Brassica oleracea HOM05D007213 ORTHO05D009165 6.1e-90 335.9 489 44.6
FvH4_5g26850 Fragaria vesca HOM05D007213 ORTHO05D009165 1.0e-89 335.1 524 45.0
FAN13G0578 Fragaria x ananassa HOM05D007213 ORTHO05D009165 3.0e-89 333.6 524 45.0
C04p08490 Brassica napus HOM05D007213 ORTHO05D009165 8.8e-89 332.0 489 44.4
DCAR_013347 Daucus carota HOM05D007213 ORTHO05D009165 1.7e-87 327.8 467 43.7
Cc10_g00050 Coffea canephora HOM05D007213 ORTHO05D009165 1.1e-86 325.1 480 44.2
MD04G1004600 Malus domestica HOM05D007213 ORTHO05D009165 9.1e-86 322.0 476 44.1
Zm00001eb035390 Zea mays HOM05D007213 ORTHO05D009165 1.2e-85 321.6 485 43.3
CiPaw.07G129300 Carya illinoinensis HOM05D007213 ORTHO05D009165 1.6e-82 311.2 354 51.4
VMungo1215G3163 Vigna mungo HOM05D007213 ORTHO05D009165 3.1e-78 297.0 474 40.9
Atru.chr13.12 Acer truncatum HOM05D007213 ORTHO05D009165 4.1e-78 296.6 515 39.4
Manes.05G113600 Manihot esculenta HOM05D007213 ORTHO05D009165 5.4e-78 296.2 475 42.3
RcHm_v2.0_Chr7g0217751 Rosa chinensis HOM05D007213 ORTHO05D009165 2.8e-71 273.9 487 41.3
Eucgr.B01563 Eucalyptus grandis HOM05D007213 ORTHO05D009165 3.7e-71 273.5 332 50.0
TWI12G1047 Tripterygium wilfordii HOM05D007213 ORTHO05D009165 1.1e-70 271.9 486 40.5
Zm00001eb174530 Zea mays HOM05D007213 ORTHO05D009165 7.0e-70 269.2 505 37.6
Nitab4.5_0003364g0010 Nicotiana tabacum HOM05D007213 ORTHO05D009165 1.0e-68 265.4 357 46.2
Aa31LG9G12510 Aethionema arabicum HOM05D007213 ORTHO05D009165 1.6e-66 258.1 487 38.6
Prupe.1G004400 Prunus persica HOM05D007213 ORTHO05D009165 4.7e-66 256.5 488 37.1
BcaC02g12047 Brassica carinata HOM05D007213 ORTHO05D009165 4.0e-65 253.4 385 43.9
Eucgr.B03972 Eucalyptus grandis HOM05D007213 ORTHO05D009165 2.0e-64 251.1 352 46.3
TAR381G0309 Trochodendron aralioides HOM05D007213 ORTHO05D009165 2.3e-60 237.7 234 60.3
Carub.0006s2290 Capsella rubella HOM05D007213 ORTHO05D009165 6.0e-53 213.0 485 35.7
HPP92_026844 Vanilla planifolia HOM05D007213 ORTHO05D009165 1.7e-52 211.5 324 44.1
Sc07g0007610 Simmondsia chinensis HOM05D007213 ORTHO05D009165 2.3e-52 211.1 385 39.2
PGR031G0765 Punica granatum HOM05D007213 ORTHO05D009165 5.1e-52 209.9 487 36.3
Mapoly0055s0021 Marchantia polymorpha HOM05D007213 ORTHO05D009165 1.1e-51 208.8 521 29.9
Glyma.03G099100 Glycine max HOM05D007213 ORTHO05D009165 6.4e-47 193.0 347 40.3
AagrBONN_evm.TU.Sc2ySwM_344.2101 Anthoceros agrestis HOM05D007213 ORTHO05D009165 9.2e-46 189.1 458 30.8
TAR381G1607 Trochodendron aralioides HOM05D007213 ORTHO05D009165 3.0e-44 184.1 188 59.0
SMO239G0074 Selaginella moellendorffii HOM05D007213 ORTHO05D009165 4.0e-41 173.7 542 30.8
Actinidia08359 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.0e-28 132.5 124 61.3
HPP92_026843 Vanilla planifolia HOM05D007213 ORTHO05D009165 8.7e-28 129.4 129 57.4
SEGI_34531 Sequoiadendron giganteum HOM05D007213 ORTHO05D009165 3.3e-27 127.5 529 27.4
Actinidia37289 Actinidia chinensis HOM05D007213 ORTHO05D009165 7.9e-21 106.3 171 43.9
Hma1.2p1_0810F.1_g221910 Hydrangea macrophylla HOM05D007213 ORTHO05D009165 6.9e-17 93.2 117 48.7
Lsat_1_v5_gn_4_123560 Lactuca sativa HOM05D007213 ORTHO05D009165 2.9e-15 87.8 74 66.2
Lsat_1_v5_gn_2_25501 Lactuca sativa HOM05D007213 ORTHO05D009165 3.2e-14 84.3 74 63.5
Dinv19952 Davidia involucrata HOM05D007213 ORTHO05D009165 9.3e-14 82.8 70 62.9
Lsat_1_v5_gn_4_171321 Lactuca sativa HOM05D007213 ORTHO05D009165 1.2e-13 82.4 74 60.8
Actinidia37290 Actinidia chinensis HOM05D007213 ORTHO05D009165 2.8e-10 71.2 90 46.7
HPP92_019587 Vanilla planifolia HOM05D007213 ORTHO05D009165 2.8e-10 71.2 131 36.6
ECA238G3550 Erigeron canadensis HOM05D008258 ORTHO05D003386 2.2e-07 61.6 100 42.0


User provided reference genes

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