Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2198 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 8.4e-58 226.9 119 100.0
CDE07G1891 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 9.6e-54 213.4 119 95.0
Thecc.08G132100 Theobroma cacao HOM05D006317 ORTHO05D007852 9.6e-46 186.8 122 77.9
Atru.chr13.1550 Acer truncatum HOM05D006317 ORTHO05D007852 2.1e-45 185.7 122 81.1
TAR375G0871 Trochodendron aralioides HOM05D006317 ORTHO05D007852 2.1e-45 185.7 122 78.7
FvH4_2g27730 Fragaria vesca HOM05D006317 ORTHO05D007852 3.6e-45 184.9 122 77.0
FAN20G1754 Fragaria x ananassa HOM05D006317 ORTHO05D007852 3.6e-45 184.9 122 77.0
CsaV3_6G034090 Cucumis sativus L. HOM05D006317 ORTHO05D007852 4.8e-45 184.5 122 77.0
Manes.02G167400 Manihot esculenta HOM05D006317 ORTHO05D007852 4.8e-45 184.5 122 77.0
Duzib041G0795 Durio zibethinus HOM05D006317 ORTHO05D007852 8.1e-45 183.7 122 77.0
Cfa018120 Carpinus fangiana HOM05D006317 ORTHO05D007852 1.1e-44 183.3 120 78.3
FAN24G3505 Fragaria x ananassa HOM05D006317 ORTHO05D007852 1.1e-44 183.3 122 76.2
Sc10g0008060 Simmondsia chinensis HOM05D006317 ORTHO05D007852 1.1e-44 183.3 122 76.2
Manes.18G081900 Manihot esculenta HOM05D006317 ORTHO05D007852 1.8e-44 182.6 122 77.0
RcHm_v2.0_Chr6g0296581 Rosa chinensis HOM05D006317 ORTHO05D007852 4.0e-44 181.4 122 75.4
Eucgr.D00248 Eucalyptus grandis HOM05D006317 ORTHO05D007852 5.3e-44 181.0 122 74.6
Sed0004620 Sechium edule HOM05D006317 ORTHO05D007852 5.3e-44 181.0 122 74.6
GSVIVG01036785001 Vitis vinifera HOM05D006317 ORTHO05D007852 5.3e-44 181.0 122 75.4
CSS0008085 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 6.9e-44 180.6 122 75.4
Gohir.A05G237800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 6.9e-44 180.6 122 77.0
Nn1g09356 Nelumbo nucifera HOM05D006317 ORTHO05D007852 6.9e-44 180.6 122 76.2
ATR1101G062 Amborella trichopoda HOM05D006317 ORTHO05D007852 9.0e-44 180.3 122 76.2
CSS0027136 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 9.0e-44 180.3 122 75.4
Duzib116G0606 Durio zibethinus HOM05D006317 ORTHO05D007852 9.0e-44 180.3 122 75.4
Hma1.2p1_0420F.1_g149670 Hydrangea macrophylla HOM05D006317 ORTHO05D007852 9.0e-44 180.3 121 75.2
QL09p032738 Quercus lobata HOM05D006317 ORTHO05D007852 1.2e-43 179.9 120 75.0
CiPaw.15G032500 Carya illinoinensis HOM05D006317 ORTHO05D007852 1.5e-43 179.5 120 77.5
PGR044G1554 Punica granatum HOM05D006317 ORTHO05D007852 1.5e-43 179.5 122 77.0
Rhsim11G0071000 Rhododendron simsii HOM05D006317 ORTHO05D007852 1.5e-43 179.5 122 74.6
Aqoxy1G01739 Aquilegia oxysepala HOM05D006317 ORTHO05D007852 2.0e-43 179.1 122 77.0
Ciclev10002865m.g Citrus clementina HOM05D006317 ORTHO05D007852 2.0e-43 179.1 122 75.4
Migut.N03266 Erythranthe guttata HOM05D006317 ORTHO05D007852 3.4e-43 178.3 119 76.5
Thhalv10019323m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 3.4e-43 178.3 122 76.2
Gohir.D05G239800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 3.4e-43 178.3 122 75.4
Gorai.009G248700 Gossypium raimondii HOM05D006317 ORTHO05D007852 3.4e-43 178.3 122 75.4
Prupe.1G490600 Prunus persica HOM05D006317 ORTHO05D007852 3.4e-43 178.3 122 74.6
CANSAT35G0412 Cannabis sativa HOM05D006317 ORTHO05D007852 5.8e-43 177.6 122 74.6
MELO3C010655.2 Cucumis melo HOM05D006317 ORTHO05D007852 9.9e-43 176.8 122 74.6
Sed0014816 Sechium edule HOM05D006317 ORTHO05D007852 9.9e-43 176.8 122 74.6
Cpa.g.sc64.145 Carica papaya HOM05D006317 ORTHO05D007852 1.3e-42 176.4 122 73.8
Dinv27277 Davidia involucrata HOM05D006317 ORTHO05D007852 2.2e-42 175.6 122 73.0
MSTRG.25364 Avicennia marina HOM05D006317 ORTHO05D007852 2.9e-42 175.3 120 75.0
Lalb_Chr08g0241161 Lupinus albus HOM05D006317 ORTHO05D007852 3.8e-42 174.9 120 75.8
Potri.019G066600 Populus trichocarpa HOM05D006317 ORTHO05D007852 3.8e-42 174.9 121 73.6
THA.LOC104813677 Tarenaya hassleriana HOM05D006317 ORTHO05D007852 4.9e-42 174.5 122 76.2
TWI32G0551 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 4.9e-42 174.5 120 75.8
CSS0006686 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 6.4e-42 174.1 122 72.1
Dinv14667 Davidia involucrata HOM05D006317 ORTHO05D007852 6.4e-42 174.1 122 73.0
Oeu051968.1 Olea europaea HOM05D006317 ORTHO05D007852 6.4e-42 174.1 122 73.0
Nitab4.5_0001168g0010 Nicotiana tabacum HOM05D006317 ORTHO05D007852 8.4e-42 173.7 122 71.3
Phvul.009G129100 Phaseolus vulgaris HOM05D006317 ORTHO05D007852 8.4e-42 173.7 117 74.4
Actinidia29484 Actinidia chinensis HOM05D006317 ORTHO05D007852 1.1e-41 173.3 119 75.6
CARHR070830 Cardamine hirsuta HOM05D006317 ORTHO05D007852 1.1e-41 173.3 122 74.6
Nitab4.5_0002045g0100 Nicotiana tabacum HOM05D006317 ORTHO05D007852 1.1e-41 173.3 122 71.3
MBI03_g35425_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 1.9e-41 172.6 122 71.3
Medtr3g088525 Medicago truncatula HOM05D006317 ORTHO05D007852 1.9e-41 172.6 117 74.4
TWI34G0863 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 1.9e-41 172.6 120 75.8
Aa31LG4G7370 Aethionema arabicum HOM05D006317 ORTHO05D007852 3.2e-41 171.8 122 73.8
Carub.0002s2423 Capsella rubella HOM05D006317 ORTHO05D007852 3.2e-41 171.8 122 73.0
Glyma.04G246100 Glycine max HOM05D006317 ORTHO05D007852 4.2e-41 171.4 117 73.5
Peaxi162Scf01003g00121 Petunia axillaris HOM05D006317 ORTHO05D007852 4.2e-41 171.4 122 71.3
Psat5g085080 Pisum sativum HOM05D006317 ORTHO05D007852 4.2e-41 171.4 120 75.0
Oeu021883.1 Olea europaea HOM05D006317 ORTHO05D007852 5.4e-41 171.0 122 71.3
VMungo1309G0699 Vigna mungo HOM05D006317 ORTHO05D007852 7.1e-41 170.6 117 73.5
Lalb_Chr23g0271161 Lupinus albus HOM05D006317 ORTHO05D007852 9.3e-41 170.2 121 72.7
BcaB07g32159 Brassica carinata HOM05D006317 ORTHO05D007852 1.2e-40 169.9 122 73.0
BraA06t24865Z Brassica rapa HOM05D006317 ORTHO05D007852 1.2e-40 169.9 122 73.0
Solyc11g005000.2 Solanum lycopersicum HOM05D006317 ORTHO05D007852 1.2e-40 169.9 122 71.3
A06p17730 Brassica napus HOM05D006317 ORTHO05D007852 1.6e-40 169.5 122 73.8
SalBow2G0856 Salvia bowleyana HOM05D006317 ORTHO05D007852 2.1e-40 169.1 117 74.4
Ah.01g020580 Amaranthus hybridus HOM05D006317 ORTHO05D007852 2.7e-40 168.7 122 71.3
ECA246G3352 Erigeron canadensis HOM05D006317 ORTHO05D007852 2.7e-40 168.7 122 71.3
AT1G77350 Arabidopsis thaliana HOM05D006317 ORTHO05D007852 3.5e-40 168.3 123 73.2
A08p28870 Brassica napus HOM05D006317 ORTHO05D007852 3.5e-40 168.3 122 73.0
CAN.G342.14 Capsicum annuum HOM05D006317 ORTHO05D007852 3.5e-40 168.3 122 69.7
Cc10_g12550 Coffea canephora HOM05D006317 ORTHO05D007852 3.5e-40 168.3 120 71.7
Glyma.06G116700 Glycine max HOM05D006317 ORTHO05D007852 3.5e-40 168.3 117 71.8
Lsat_1_v5_gn_6_109060 Lactuca sativa HOM05D006317 ORTHO05D007852 3.5e-40 168.3 122 72.1
Lj1g0010212 Lotus japonicus HOM05D006317 ORTHO05D007852 4.6e-40 167.9 107 79.4
PGSC0003DMG400006049 Solanum tuberosum HOM05D006317 ORTHO05D007852 6.0e-40 167.5 122 70.5
BcaB03g14259 Brassica carinata HOM05D006317 ORTHO05D007852 1.0e-39 166.8 120 72.5
Thhalv10009123m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 1.3e-39 166.4 123 74.0
Sp1g19190 Schrenkiella parvula HOM05D006317 ORTHO05D007852 1.3e-39 166.4 122 71.3
arahy.Tifrunner.gnm1.ann1.0GY0RD Arachis hypogaea HOM05D006317 ORTHO05D007852 1.8e-39 166.0 123 69.1
arahy.Tifrunner.gnm1.ann1.ID1H8K Arachis hypogaea HOM05D006317 ORTHO05D007852 1.8e-39 166.0 123 69.1
A07p14980 Brassica napus HOM05D006317 ORTHO05D007852 1.8e-39 166.0 119 73.9
BraA07t29244Z Brassica rapa HOM05D006317 ORTHO05D007852 1.8e-39 166.0 119 73.9
SGA_v2.0_scaffold25G11134 Striga asiatica HOM05D006317 ORTHO05D007852 1.8e-39 166.0 109 75.2
BcaC06g34898 Brassica carinata HOM05D006317 ORTHO05D007852 2.3e-39 165.6 119 73.1
C08p20980 Brassica napus HOM05D006317 ORTHO05D007852 2.3e-39 165.6 122 71.3
BolC7t42733H Brassica oleracea HOM05D006317 ORTHO05D007852 2.3e-39 165.6 119 73.1
BolC8t49735H Brassica oleracea HOM05D006317 ORTHO05D007852 2.3e-39 165.6 122 71.3
Sopen11g001020 Solanum pennellii HOM05D006317 ORTHO05D007852 2.3e-39 165.6 122 69.7
C07p22030 Brassica napus HOM05D006317 ORTHO05D007852 6.7e-39 164.1 118 72.9
BraA08t34818Z Brassica rapa HOM05D006317 ORTHO05D007852 1.1e-38 163.3 122 70.5
AUR62016336 Chenopodium quinoa HOM05D006317 ORTHO05D007852 1.5e-38 162.9 122 69.7
ClCG08G005990 Citrullus lanatus HOM05D006317 ORTHO05D007852 2.5e-38 162.2 172 54.7
unitig_22.g5398 Utricularia gibba HOM05D006317 ORTHO05D007852 2.5e-38 162.2 120 70.8
Zm00001eb128810 Zea mays HOM05D006317 ORTHO05D007852 2.1e-37 159.1 122 67.2
unitig_8.g3836 Utricularia gibba HOM05D006317 ORTHO05D007852 3.7e-37 158.3 117 70.1
HanXRQChr05g0148711 Helianthus annuus HOM05D006317 ORTHO05D007852 4.8e-37 157.9 115 72.2
Os05g0486200 Oryza sativa ssp. japonica HOM05D006317 ORTHO05D007852 1.4e-36 156.4 123 68.3
AL2G37550 Arabidopsis lyrata HOM05D006317 ORTHO05D007852 5.3e-36 154.5 148 61.5
Sabra19G0078300 Salix brachista HOM05D006317 ORTHO05D007852 1.0e-34 150.2 135 60.7
HPP92_021212 Vanilla planifolia HOM05D006317 ORTHO05D007852 1.0e-34 150.2 122 65.6
MBI06_g36652_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 8.4e-34 147.1 122 64.8
COL.COLO4_05688 Corchorus olitorius HOM05D006317 ORTHO05D007852 7.1e-33 144.1 91 81.3
SHI09189 Sapria himalayana HOM05D006317 ORTHO05D007852 7.1e-33 144.1 131 60.3
FAN27G3154 Fragaria x ananassa HOM05D006317 ORTHO05D007852 1.2e-32 143.3 91 76.9
vmacro16444 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 3.0e-31 138.7 94 75.5
Mapoly0014s0111 Marchantia polymorpha HOM05D006317 ORTHO05D007852 6.7e-31 137.5 114 57.9
vmacro00858 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 1.5e-30 136.3 91 76.9
AagrBONN_evm.TU.Sc2ySwM_344.4689 Anthoceros agrestis HOM05D006317 ORTHO05D007852 7.4e-30 134.0 118 59.3
EL10Ac9g21899 Beta vulgaris HOM05D006317 ORTHO05D007852 2.8e-29 132.1 91 74.7
CBR_g12067 Chara braunii HOM05D006317 ORTHO05D007852 6.9e-28 127.5 105 61.9
SMO298G0052 Selaginella moellendorffii HOM05D006317 ORTHO05D007852 4.5e-27 124.8 101 65.3
BcaB03g14260 Brassica carinata HOM05D006317 ORTHO05D007852 5.5e-25 117.9 125 58.4
DCAR_018876 Daucus carota HOM05D006317 ORTHO05D007852 3.3e-22 108.6 69 81.2
Nn7g37402 Nelumbo nucifera HOM05D006317 ORTHO05D007852 3.7e-21 105.1 70 71.4
Haze_17997 Corylus avellana HOM05D001650 ORTHO05D001592 2.2e-18 95.9 117 48.7
Gohir.A02G071601 Gossypium hirsutum HOM05D006317 ORTHO05D007852 8.8e-15 84.0 58 77.6
CSS0043705 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 4.8e-13 78.2 46 78.3
SGA_v2.0_scaffold28G11977 Striga asiatica HOM05D006317 ORTHO05D007852 3.4e-11 72.0 52 76.9
BolC5t30761H Brassica oleracea HOM05D006317 ORTHO05D007852 1.6e-08 63.2 48 72.9
QL05p046423 Quercus lobata HOM05D006317 ORTHO05D007852 7.9e-08 60.8 49 61.2
FAN15G1039 Fragaria x ananassa HOM05D006317 ORTHO05D007852 1.0e-07 60.5 37 67.6


User provided reference genes

Program Settings