Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2177 Ceratophyllum demersum HOM05D003937 ORTHO05D004583 2.8e-194 681.8 350 100.0
CDE06G0218 Ceratophyllum demersum HOM05D003937 ORTHO05D004583 1.1e-145 520.4 349 78.8
Nn5g30963 Nelumbo nucifera HOM05D003937 ORTHO05D004583 8.0e-16 89.0 127 43.3
MBI08_g12714_MAGBIO Magnolia biondii HOM05D003937 ORTHO05D004583 1.5e-14 84.7 123 43.9
CDE05G2511 Ceratophyllum demersum HOM05D003937 ORTHO05D004583 2.0e-14 84.3 70 62.9
Nn6g31719 Nelumbo nucifera HOM05D003937 ORTHO05D004583 1.3e-13 81.6 118 42.4
Zm00001eb420050 Zea mays HOM05D003937 ORTHO05D004583 1.8e-12 77.8 145 37.2
PSO675G5999 Papaver somniferum HOM05D003937 ORTHO05D004583 2.7e-11 73.9 145 39.3
PSO541G3051 Papaver somniferum HOM05D003937 ORTHO05D004583 3.5e-11 73.6 67 59.7
TAR625G1504 Trochodendron aralioides HOM05D003937 ORTHO05D004583 4.5e-11 73.2 158 37.3
Os04g0136900 Oryza sativa ssp. japonica HOM05D003937 ORTHO05D004583 1.0e-10 72.0 122 41.8
HPP92_021046 Vanilla planifolia HOM05D003937 ORTHO05D004583 1.0e-10 72.0 71 53.5
Glyma.06G000500 Glycine max HOM05D003937 ORTHO05D004583 1.7e-10 71.2 128 42.2
TWI75G1612 Tripterygium wilfordii HOM05D003937 ORTHO05D004583 2.9e-10 70.5 85 45.9
VMungo0540G0354 Vigna mungo HOM05D003937 ORTHO05D004583 2.9e-10 70.5 102 47.1
Phvul.006G042500 Phaseolus vulgaris HOM05D003937 ORTHO05D004583 3.9e-10 70.1 130 41.5
Glyma.04G000700 Glycine max HOM05D003937 ORTHO05D004583 1.1e-09 68.6 128 41.4
Pp3c19_6980 Physcomitrium patens HOM05D003937 ORTHO05D004583 1.1e-09 68.6 80 47.5
Aqoxy5G01031 Aquilegia oxysepala HOM05D003937 ORTHO05D004583 1.5e-09 68.2 82 48.8
COL.COLO4_17933 Corchorus olitorius HOM05D003937 ORTHO05D004583 1.5e-09 68.2 142 35.2
MD05G1134400 Malus domestica HOM05D003937 ORTHO05D004583 1.5e-09 68.2 121 40.5
Os09g0549400 Oryza sativa ssp. japonica HOM05D003937 ORTHO05D004583 1.5e-09 68.2 76 51.3
Lalb_Chr08g0246851 Lupinus albus HOM05D003937 ORTHO05D004583 1.9e-09 67.8 123 39.8
Sc18g0006030 Simmondsia chinensis HOM05D003937 ORTHO05D004583 1.9e-09 67.8 98 40.8
Duzib052G0838 Durio zibethinus HOM05D003937 ORTHO05D004583 3.3e-09 67.0 133 39.1
Thecc.02G044800 Theobroma cacao HOM05D003937 ORTHO05D004583 3.3e-09 67.0 68 54.4
GSVIVG01026659001 Vitis vinifera HOM05D003937 ORTHO05D004583 3.3e-09 67.0 106 38.7
Ciclev10028873m.g Citrus clementina HOM05D003937 ORTHO05D004583 4.3e-09 66.6 77 50.6
Gohir.A01G174900 Gossypium hirsutum HOM05D003937 ORTHO05D004583 5.6e-09 66.2 116 37.9
MD10G1139500 Malus domestica HOM05D003937 ORTHO05D004583 5.6e-09 66.2 70 54.3
RcHm_v2.0_Chr6g0280681 Rosa chinensis HOM05D003937 ORTHO05D004583 5.6e-09 66.2 82 48.8
FvH4_2g16620 Fragaria vesca HOM05D003937 ORTHO05D004583 7.3e-09 65.9 84 48.8
FAN15G3453 Fragaria x ananassa HOM05D003937 ORTHO05D004583 7.3e-09 65.9 84 48.8
FAN20G0177 Fragaria x ananassa HOM05D003937 ORTHO05D004583 7.3e-09 65.9 84 48.8
FAN24G0691 Fragaria x ananassa HOM05D003937 ORTHO05D004583 7.3e-09 65.9 84 48.8
FAN27G2747 Fragaria x ananassa HOM05D003937 ORTHO05D004583 7.3e-09 65.9 84 48.8
Hma1.2p1_0271F.1_g108900 Hydrangea macrophylla HOM05D003937 ORTHO05D004583 7.3e-09 65.9 82 47.6
Potri.009G166100 Populus trichocarpa HOM05D003937 ORTHO05D004583 9.5e-09 65.5 101 40.6
Gohir.A03G209600 Gossypium hirsutum HOM05D003937 ORTHO05D004583 1.6e-08 64.7 153 33.3
Gohir.D02G231300 Gossypium hirsutum HOM05D003937 ORTHO05D004583 1.6e-08 64.7 153 33.3
arahy.Tifrunner.gnm1.ann1.388DF8 Arachis hypogaea HOM05D003937 ORTHO05D004583 2.1e-08 64.3 127 40.2
Migut.N02961 Erythranthe guttata HOM05D003937 ORTHO05D004583 2.1e-08 64.3 124 39.5
Manes.04G067300 Manihot esculenta HOM05D003937 ORTHO05D004583 2.1e-08 64.3 123 39.0
QL11p055606 Quercus lobata HOM05D003937 ORTHO05D004583 2.1e-08 64.3 81 48.1
QL11p055907 Quercus lobata HOM05D003937 ORTHO05D004583 2.1e-08 64.3 81 48.1
Dinv41880 Davidia involucrata HOM05D001927 ORTHO05D001972 2.8e-08 63.9 82 45.1
Aqoxy6G01687 Aquilegia oxysepala HOM05D003937 ORTHO05D004583 3.6e-08 63.5 227 30.0
CiPaw.05G091700 Carya illinoinensis HOM05D003937 ORTHO05D004583 4.7e-08 63.2 97 39.2
Zm00001eb104250 Zea mays HOM05D003937 ORTHO05D004583 4.7e-08 63.2 86 46.5
Gohir.D01G166000 Gossypium hirsutum HOM05D003937 ORTHO05D004583 6.1e-08 62.8 116 36.2
Gorai.002G206500 Gossypium raimondii HOM05D003937 ORTHO05D004583 6.1e-08 62.8 116 36.2
arahy.Tifrunner.gnm1.ann1.G18Z51 Arachis hypogaea HOM05D003937 ORTHO05D004583 8.0e-08 62.4 127 39.4
Ca_16692_v3 Cicer arietinum L. HOM05D003937 ORTHO05D004583 8.0e-08 62.4 120 36.7
HanXRQChr12g0374421 Helianthus annuus HOM05D003937 ORTHO05D004583 8.0e-08 62.4 155 32.9
Peaxi162Scf00362g00245 Petunia axillaris HOM05D003937 ORTHO05D004583 8.0e-08 62.4 125 36.8
Solyc01g112180.4 Solanum lycopersicum HOM05D003937 ORTHO05D004583 1.0e-07 62.0 118 35.6
Sopen01g054230 Solanum pennellii HOM05D003937 ORTHO05D004583 1.0e-07 62.0 125 36.0
PGSC0003DMG400014661 Solanum tuberosum HOM05D003937 ORTHO05D004583 1.0e-07 62.0 125 37.6
Cc10_g00590 Coffea canephora HOM05D003937 ORTHO05D004583 1.4e-07 61.6 79 43.0
ECA246G4591 Erigeron canadensis HOM05D003937 ORTHO05D004583 1.4e-07 61.6 70 50.0
Lalb_Chr11g0061231 Lupinus albus HOM05D003937 ORTHO05D004583 1.4e-07 61.6 67 49.3
Medtr3g118500 Medicago truncatula HOM05D003937 ORTHO05D004583 1.4e-07 61.6 73 49.3
Oeu003435.2 Olea europaea HOM05D003937 ORTHO05D004583 1.4e-07 61.6 144 34.7
Potri.004G205200 Populus trichocarpa HOM05D003937 ORTHO05D004583 1.4e-07 61.6 73 47.9
ClCG02G009960 Citrullus lanatus HOM05D003937 ORTHO05D004583 1.8e-07 61.2 82 47.6
Duzib132G1231 Durio zibethinus HOM05D003937 ORTHO05D004583 1.8e-07 61.2 68 50.0
vmacro17300 Vaccinium macrocarpon HOM05D003937 ORTHO05D004583 3.1e-07 60.5 97 38.1
EL10Ac9g21245 Beta vulgaris HOM05D003937 ORTHO05D004583 5.2e-07 59.7 246 27.2
CSS0036568 Camellia sinensis var. sinensis HOM05D003937 ORTHO05D004583 5.2e-07 59.7 68 48.5
Cpa.g.sc20.204 Carica papaya HOM05D003937 ORTHO05D004583 5.2e-07 59.7 73 45.2
GSVIVG01009897001 Vitis vinifera HOM05D003937 ORTHO05D004583 5.2e-07 59.7 80 45.0
AUR62011702 Chenopodium quinoa HOM05D003937 ORTHO05D004583 6.8e-07 59.3 225 30.7
Eucgr.I01517 Eucalyptus grandis HOM05D003937 ORTHO05D004583 6.8e-07 59.3 71 46.5
Sabra04G0138500 Salix brachista HOM05D003937 ORTHO05D004583 6.8e-07 59.3 69 47.8
Sed0010938 Sechium edule HOM05D003937 ORTHO05D004583 6.8e-07 59.3 80 47.5
SMO347G0358 Selaginella moellendorffii HOM05D003937 ORTHO05D004583 6.8e-07 59.3 74 47.3
TPR.G38537 Trifolium pratense HOM05D003937 ORTHO05D004583 6.8e-07 59.3 68 51.5
CDE05G1352 Ceratophyllum demersum HOM05D003937 ORTHO05D004583 1.2e-06 58.5 193 28.5
Lsat_1_v5_gn_3_48780 Lactuca sativa HOM05D003937 ORTHO05D004583 1.2e-06 58.5 113 32.7
AagrBONN_evm.TU.Sc2ySwM_117.297 Anthoceros agrestis HOM05D003937 ORTHO05D004583 1.5e-06 58.2 70 44.3
Atru.chr5.3549 Acer truncatum HOM05D003937 ORTHO05D004583 2.0e-06 57.8 130 36.2
Lj1g0000413 Lotus japonicus HOM05D003937 ORTHO05D004583 2.0e-06 57.8 128 37.5
CAN.G311.122 Capsicum annuum HOM05D003937 ORTHO05D004583 2.6e-06 57.4 77 46.8
CsaV3_6G010160 Cucumis sativus L. HOM05D003937 ORTHO05D004583 2.6e-06 57.4 67 49.3
ECA233G5124 Erigeron canadensis HOM05D003937 ORTHO05D004583 2.6e-06 57.4 83 42.2
Thhalv10026442m.g Eutrema salsugineum HOM05D003937 ORTHO05D004583 2.6e-06 57.4 120 35.8
ATR0661G493 Amborella trichopoda HOM05D003937 ORTHO05D004583 3.4e-06 57.0 66 47.0
SEGI_41193 Sequoiadendron giganteum HOM05D003937 ORTHO05D004583 3.4e-06 57.0 72 43.1
HPP92_025977 Vanilla planifolia HOM05D003937 ORTHO05D004583 3.4e-06 57.0 72 44.4
PGR142G1962 Punica granatum HOM05D003937 ORTHO05D004583 4.4e-06 56.6 72 47.2
TAR381G0291 Trochodendron aralioides HOM05D003937 ORTHO05D004583 4.4e-06 56.6 180 31.1
CANSAT25G1327 Cannabis sativa HOM05D003937 ORTHO05D004583 5.8e-06 56.2 126 36.5
AUR62012919 Chenopodium quinoa HOM05D003937 ORTHO05D004583 5.8e-06 56.2 225 29.8
Gorai.005G258900 Gossypium raimondii HOM05D003937 ORTHO05D004583 5.8e-06 56.2 153 30.7
Nitab4.5_0000588g0020 Nicotiana tabacum HOM05D003937 ORTHO05D004583 7.5e-06 55.8 71 46.5
Rhsim05G0047600 Rhododendron simsii HOM05D003937 ORTHO05D004583 7.5e-06 55.8 79 44.3
AL7G10200 Arabidopsis lyrata HOM05D003937 ORTHO05D004583 9.8e-06 55.5 85 43.5
BcaB03g12256 Brassica carinata HOM05D003937 ORTHO05D004583 9.8e-06 55.5 74 47.3
Oeu046353.1 Olea europaea HOM05D003937 ORTHO05D004583 9.8e-06 55.5 67 47.8
Psat5g000520 Pisum sativum HOM05D003937 ORTHO05D004583 9.8e-06 55.5 165 29.7


User provided reference genes

Program Settings