Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2160 Ceratophyllum demersum HOM05D007550 ORTHO05D009474 9.6e-77 290.0 142 100.0
GSVIVG01037778001 Vitis vinifera HOM05D007550 ORTHO05D009474 3.1e-35 152.1 93 73.1
CiPaw.12G135900 Carya illinoinensis HOM05D007550 ORTHO05D009474 7.0e-35 151.0 110 69.1
Manes.15G063300 Manihot esculenta HOM05D007550 ORTHO05D009474 3.5e-34 148.7 120 59.2
Atru.chr2.3607 Acer truncatum HOM05D007550 ORTHO05D009474 4.5e-34 148.3 94 68.1
Medtr5g094600 Medicago truncatula HOM05D007550 ORTHO05D009474 3.8e-33 145.2 104 64.4
TWI38G1227 Tripterygium wilfordii HOM05D007550 ORTHO05D009474 6.5e-33 144.4 87 74.7
LjContig00272g0022958 Lotus japonicus HOM05D007550 ORTHO05D009474 8.5e-33 144.1 144 50.0
Thecc.07G022400 Theobroma cacao HOM05D007550 ORTHO05D009474 8.5e-33 144.1 86 70.9
Dinv10312 Davidia involucrata HOM05D007550 ORTHO05D009474 1.5e-32 143.3 92 71.7
QL08p005510 Quercus lobata HOM05D007550 ORTHO05D009474 2.5e-32 142.5 94 68.1
Actinidia39070 Actinidia chinensis HOM05D007550 ORTHO05D009474 4.2e-32 141.7 90 71.1
Lj1A885G31 Lonicera japonica HOM05D007550 ORTHO05D009474 4.2e-32 141.7 136 50.7
TAR626G1551 Trochodendron aralioides HOM05D007550 ORTHO05D009474 4.2e-32 141.7 140 49.3
Duzib213G0332 Durio zibethinus HOM05D007550 ORTHO05D009474 7.2e-32 141.0 95 64.2
Hma1.2p1_0036F.1_g022730 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 1.6e-31 139.8 83 77.1
CARHR268880 Cardamine hirsuta HOM05D007550 ORTHO05D009474 2.1e-31 139.4 105 63.8
AL8G31140 Arabidopsis lyrata HOM05D007550 ORTHO05D009474 2.7e-31 139.0 105 61.9
MD11G1204800 Malus domestica HOM05D007550 ORTHO05D009474 2.7e-31 139.0 87 70.1
A10p12800 Brassica napus HOM05D007550 ORTHO05D009474 4.7e-31 138.3 97 69.1
BraA10t43373Z Brassica rapa HOM05D007550 ORTHO05D009474 4.7e-31 138.3 97 69.1
AT5G55570 Arabidopsis thaliana HOM05D007550 ORTHO05D009474 6.1e-31 137.9 97 67.0
Gorai.002G096500 Gossypium raimondii HOM05D007550 ORTHO05D009474 6.1e-31 137.9 96 63.5
Peaxi162Scf00955g00219 Petunia axillaris HOM05D007550 ORTHO05D009474 6.1e-31 137.9 130 53.8
BolC9t57498H Brassica oleracea HOM05D007550 ORTHO05D009474 8.0e-31 137.5 102 63.7
Lalb_Chr17g0348791 Lupinus albus HOM05D007550 ORTHO05D009474 8.0e-31 137.5 101 66.3
Nn1g07439 Nelumbo nucifera HOM05D007550 ORTHO05D009474 8.0e-31 137.5 99 61.6
ATR1149G080 Amborella trichopoda HOM05D007550 ORTHO05D009474 1.0e-30 137.1 101 61.4
C09p46340 Brassica napus HOM05D007550 ORTHO05D009474 1.0e-30 137.1 115 58.3
Sc18g0004240 Simmondsia chinensis HOM05D007550 ORTHO05D009474 1.0e-30 137.1 95 69.5
MELO3C014132.2 Cucumis melo HOM05D007550 ORTHO05D009474 1.4e-30 136.7 103 64.1
Migut.M01677 Erythranthe guttata HOM05D007550 ORTHO05D009474 1.4e-30 136.7 102 63.7
Thhalv10014968m.g Eutrema salsugineum HOM05D007550 ORTHO05D009474 1.8e-30 136.3 105 64.8
Nitab4.5_0001750g0040 Nicotiana tabacum HOM05D007550 ORTHO05D009474 1.8e-30 136.3 101 62.4
Gohir.A01G087300 Gossypium hirsutum HOM05D007550 ORTHO05D009474 2.3e-30 136.0 96 63.5
FAN16G0277 Fragaria x ananassa HOM05D007550 ORTHO05D009474 3.0e-30 135.6 154 49.4
Psat2g008720 Pisum sativum HOM05D007550 ORTHO05D009474 3.0e-30 135.6 99 61.6
Solyc12g015630.2 Solanum lycopersicum HOM05D007550 ORTHO05D009474 3.0e-30 135.6 90 67.8
THA.LOC104817699 Tarenaya hassleriana HOM05D007550 ORTHO05D009474 3.0e-30 135.6 128 57.0
FvH4_3g24050 Fragaria vesca HOM05D007550 ORTHO05D009474 4.0e-30 135.2 155 47.1
FAN11G2859 Fragaria x ananassa HOM05D007550 ORTHO05D009474 5.2e-30 134.8 155 47.1
Sabra02G0058600 Salix brachista HOM05D007550 ORTHO05D009474 1.5e-29 133.3 90 70.0
PGSC0003DMG400029800 Solanum tuberosum HOM05D007550 ORTHO05D009474 1.5e-29 133.3 86 69.8
Aa31LG3G11520 Aethionema arabicum HOM05D007550 ORTHO05D009474 2.0e-29 132.9 105 58.1
DCAR_022604 Daucus carota HOM05D007550 ORTHO05D009474 2.0e-29 132.9 116 57.8
Sed0001315 Sechium edule HOM05D007550 ORTHO05D009474 2.6e-29 132.5 95 65.3
Nitab4.5_0000163g0330 Nicotiana tabacum HOM05D007550 ORTHO05D009474 4.4e-29 131.7 102 61.8
RcHm_v2.0_Chr5g0042631 Rosa chinensis HOM05D007550 ORTHO05D009474 5.7e-29 131.3 151 47.7
Phvul.008G275600 Phaseolus vulgaris HOM05D007550 ORTHO05D009474 7.5e-29 131.0 92 64.1
COL.COLO4_09786 Corchorus olitorius HOM05D007550 ORTHO05D009474 9.7e-29 130.6 103 57.3
HanXRQChr13g0408011 Helianthus annuus HOM05D007550 ORTHO05D009474 1.3e-28 130.2 84 70.2
CAN.G410.43 Capsicum annuum HOM05D007550 ORTHO05D009474 1.7e-28 129.8 91 64.8
Cc05_g14670 Coffea canephora HOM05D007550 ORTHO05D009474 1.7e-28 129.8 89 67.4
CsaV3_3G004390 Cucumis sativus L. HOM05D007550 ORTHO05D009474 1.7e-28 129.8 102 64.7
ECA240G1453 Erigeron canadensis HOM05D007550 ORTHO05D009474 2.2e-28 129.4 88 65.9
Sopen12g007530 Solanum pennellii HOM05D007550 ORTHO05D009474 2.2e-28 129.4 90 66.7
MSTRG.6984 Avicennia marina HOM05D007550 ORTHO05D009474 1.1e-27 127.1 85 71.8
Zm00001eb370450 Zea mays HOM05D007550 ORTHO05D009474 1.8e-27 126.3 101 59.4
Os01g0762300 Oryza sativa ssp. japonica HOM05D007550 ORTHO05D009474 2.4e-27 125.9 71 74.6
HPP92_028367 Vanilla planifolia HOM05D007550 ORTHO05D009474 4.5e-26 121.7 74 71.6
Mapoly0128s0022 Marchantia polymorpha HOM05D007550 ORTHO05D009474 7.7e-26 120.9 113 53.1
Cfa020230 Carpinus fangiana HOM05D007550 ORTHO05D009474 2.9e-25 119.0 81 67.9
arahy.Tifrunner.gnm1.ann1.S0MYI4 Arachis hypogaea HOM05D007550 ORTHO05D009474 1.1e-24 117.1 141 44.7
arahy.Tifrunner.gnm1.ann1.R7ZLS4 Arachis hypogaea HOM05D007550 ORTHO05D009474 1.5e-24 116.7 94 58.5
AagrBONN_evm.TU.Sc2ySwM_344.2781 Anthoceros agrestis HOM05D007550 ORTHO05D009474 1.9e-24 116.3 93 55.9
BcaB08g35917 Brassica carinata HOM05D007550 ORTHO05D009474 9.4e-24 114.0 97 60.8
PGR031G0516 Punica granatum HOM05D007550 ORTHO05D009474 2.1e-23 112.8 83 63.9
Oeu005969.1 Olea europaea HOM05D007550 ORTHO05D009474 3.6e-23 112.1 123 49.6
Potri.011G085501 Populus trichocarpa HOM05D007550 ORTHO05D009474 3.6e-23 112.1 74 70.3
CBR_g30607 Chara braunii HOM05D007550 ORTHO05D009474 4.7e-23 111.7 93 54.8
ClCG10G004590 Citrullus lanatus HOM05D007550 ORTHO05D009474 1.0e-22 110.5 102 56.9
Ciclev10009869m.g Citrus clementina HOM05D007550 ORTHO05D009474 4.0e-22 108.6 71 67.6
VMungo0647G1572 Vigna mungo HOM05D007550 ORTHO05D009474 4.0e-22 108.6 85 58.8
FAN25G3253 Fragaria x ananassa HOM05D007550 ORTHO05D009474 5.2e-22 108.2 142 45.8
Aqoxy4G02213 Aquilegia oxysepala HOM05D007550 ORTHO05D009474 6.8e-22 107.8 77 68.8
FAN21G0016 Fragaria x ananassa HOM05D007550 ORTHO05D009474 8.8e-22 107.5 142 44.4
FAN25G1734 Fragaria x ananassa HOM05D007550 ORTHO05D009474 8.8e-22 107.5 142 45.8
Carub.0008s1594 Capsella rubella HOM05D007550 ORTHO05D009474 2.0e-21 106.3 115 48.7
Glyma.14G015900 Glycine max HOM05D007550 ORTHO05D009474 4.4e-21 105.1 85 62.4
unitig_899.g15275 Utricularia gibba HOM05D007550 ORTHO05D009474 4.4e-21 105.1 72 69.4
Gohir.D01G073600 Gossypium hirsutum HOM05D007550 ORTHO05D009474 5.7e-21 104.8 81 59.3
Hma1.2p1_0036F.1_g022720 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 8.3e-20 100.9 145 43.4
PSO541G5298 Papaver somniferum HOM05D007550 ORTHO05D009474 5.4e-19 98.2 125 44.8
PSO675G9283 Papaver somniferum HOM05D007550 ORTHO05D009474 5.4e-19 98.2 125 44.8
EL10Ac4g07615 Beta vulgaris HOM05D007550 ORTHO05D009474 9.1e-19 97.4 110 45.5
SGA_v2.0_scaffold168G38530 Striga asiatica HOM05D007550 ORTHO05D009474 2.9e-17 92.4 66 66.7
CANSAT56G0742 Cannabis sativa HOM05D007550 ORTHO05D009474 3.8e-17 92.0 73 61.6
Cre03.g145567 Chlamydomonas reinhardtii HOM05D007550 ORTHO05D009474 2.1e-15 86.3 78 53.8
PRCOL_00004706 Prasinoderma coloniale HOM05D007550 ORTHO05D009474 1.8e-14 83.2 70 54.3
Pp3c18_5680 Physcomitrium patens HOM05D007550 ORTHO05D009474 3.0e-14 82.4 83 48.2
vmacro09669 Vaccinium macrocarpon HOM05D007550 ORTHO05D009474 2.4e-11 72.8 60 58.3
MBI16_g11565_MAGBIO Magnolia biondii HOM05D007550 ORTHO05D009474 3.1e-11 72.4 77 57.1
Ah.06g181190 Amaranthus hybridus HOM05D000063 ORTHO05D000906 7.8e-10 67.8 123 38.2
Potri.011G085700 Populus trichocarpa HOM05D007550 ORTHO05D009474 3.3e-08 62.4 48 66.7
Prupe.4G233900 Prunus persica HOM05D007550 ORTHO05D009474 4.3e-08 62.0 91 45.1
Hund01919 Selenicereus undatus HOM05D007550 ORTHO05D009474 1.2e-07 60.5 62 53.2
Sp6g17490 Schrenkiella parvula HOM05D007550 ORTHO05D009474 1.0e-06 57.4 63 54.0


User provided reference genes

Program Settings