Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2100 Ceratophyllum demersum HOM05D005462 ORTHO05D006718 7.1e-60 234.2 162 100.0
vmacro07266 Vaccinium macrocarpon HOM05D005462 ORTHO05D006718 3.6e-19 99.0 89 57.3
CDE06G0092 Ceratophyllum demersum HOM05D005462 ORTHO05D006718 5.9e-14 81.6 39 100.0
Cpa.g.sc1114.1 Carica papaya HOM05D005462 ORTHO05D006718 3.0e-10 69.3 43 69.8
Sabra10G0188800 Salix brachista HOM05D005462 ORTHO05D006718 2.2e-08 63.2 42 61.9
PGSC0003DMG402007600 Solanum tuberosum HOM05D005462 ORTHO05D006718 8.3e-08 61.2 41 68.3
Aa31LG11G1530 Aethionema arabicum HOM05D005764 ORTHO05D006600 1.4e-07 60.5 95 35.8
Oeu033987.1 Olea europaea HOM05D005462 ORTHO05D006718 1.4e-07 60.5 40 67.5
CSS0015574 Camellia sinensis var. sinensis HOM05D005462 ORTHO05D006718 2.4e-07 59.7 40 67.5
PSO210G3738 Papaver somniferum HOM05D010315 ORTHO05D011376 4.1e-07 58.9 92 32.6
DCAR_013250 Daucus carota HOM05D003039 ORTHO05D008410 7.0e-07 58.2 81 38.3
RcHm_v2.0_Chr1g0329261 Rosa chinensis HOM05D003039 ORTHO05D008410 9.2e-07 57.8 81 37.0
vmacro20709 Vaccinium macrocarpon HOM05D003689 ORTHO05D003950 9.2e-07 57.8 98 30.6
ECA232G4961 Erigeron canadensis HOM05D005949 ORTHO05D006945 1.6e-06 57.0 96 34.4
Peaxi162Scf00420g00016 Petunia axillaris HOM05D005949 ORTHO05D006945 1.6e-06 57.0 96 34.4
MD03G1030500 Malus domestica HOM05D003039 ORTHO05D008410 2.7e-06 56.2 81 38.3
FAN21G3709 Fragaria x ananassa HOM05D003177 ORTHO05D003481 3.5e-06 55.8 82 30.5
Prupe.2G028200 Prunus persica HOM05D003039 ORTHO05D008410 3.5e-06 55.8 81 35.8
Aqoxy5G03678 Aquilegia oxysepala HOM05D005949 ORTHO05D006945 4.5e-06 55.5 96 31.2
Ciclev10030383m.g Citrus clementina HOM05D000855 ORTHO05D000003 4.5e-06 55.5 88 30.7
FvH4_3g21820 Fragaria vesca HOM05D003177 ORTHO05D003481 4.5e-06 55.5 82 30.5
FAN11G2546 Fragaria x ananassa HOM05D003177 ORTHO05D003481 4.5e-06 55.5 82 30.5
FAN25G3665 Fragaria x ananassa HOM05D003177 ORTHO05D003481 4.5e-06 55.5 82 30.5
Nitab4.5_0001562g0070 Nicotiana tabacum HOM05D005949 ORTHO05D006945 4.5e-06 55.5 96 33.3
Nitab4.5_0006683g0100 Nicotiana tabacum HOM05D005949 ORTHO05D006945 4.5e-06 55.5 96 33.3
Psat6g233440 Pisum sativum HOM05D007202 ORTHO05D009125 4.5e-06 55.5 92 33.7
GSVIVG01012782001 Vitis vinifera HOM05D003039 ORTHO05D008410 4.5e-06 55.5 81 35.8
BcaC09g48647 Brassica carinata HOM05D002444 ORTHO05D009235 5.9e-06 55.1 74 35.1
C01p47300 Brassica napus HOM05D002444 ORTHO05D009235 5.9e-06 55.1 74 35.1
BolC1t04700H Brassica oleracea HOM05D002444 ORTHO05D009235 5.9e-06 55.1 74 35.1
Lsat_1_v5_gn_9_88941 Lactuca sativa HOM05D003039 ORTHO05D008410 5.9e-06 55.1 80 32.5
MD11G1035500 Malus domestica HOM05D003039 ORTHO05D008410 5.9e-06 55.1 81 37.0
A01p37370 Brassica napus HOM05D002444 ORTHO05D009235 7.7e-06 54.7 74 35.1
BraA01t03795Z Brassica rapa HOM05D002444 ORTHO05D009235 7.7e-06 54.7 74 35.1
HanXRQChr15g0486811 Helianthus annuus HOM05D005949 ORTHO05D006945 7.7e-06 54.7 96 32.3
Lj1P893G46 Lonicera japonica HOM05D003039 ORTHO05D008410 7.7e-06 54.7 81 35.8


User provided reference genes

Program Settings