Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2073 Ceratophyllum demersum HOM05D006315 ORTHO05D008052 9.3e-187 656.8 337 100.0
Nn6g32180 Nelumbo nucifera HOM05D006315 ORTHO05D008052 2.1e-122 443.0 344 68.0
Sopen01g042560 Solanum pennellii HOM05D006315 ORTHO05D008052 7.0e-118 427.9 289 73.7
TAR381G0108 Trochodendron aralioides HOM05D006315 ORTHO05D008052 2.0e-117 426.4 331 65.9
CSS0039769 Camellia sinensis var. sinensis HOM05D006315 ORTHO05D008052 3.5e-117 425.6 302 71.2
Eucgr.B01969 Eucalyptus grandis HOM05D006315 ORTHO05D008052 2.3e-116 422.9 346 63.3
PGSC0003DMG400018995 Solanum tuberosum HOM05D006315 ORTHO05D008052 3.8e-116 422.2 337 65.9
AUR62000828 Chenopodium quinoa HOM05D006315 ORTHO05D008052 8.6e-116 421.0 293 71.7
Dinv40287 Davidia involucrata HOM05D006315 ORTHO05D008052 1.1e-115 420.6 345 64.9
Nitab4.5_0004395g0040 Nicotiana tabacum HOM05D006315 ORTHO05D008052 1.9e-115 419.9 345 64.3
CAN.G1034.11 Capsicum annuum HOM05D006315 ORTHO05D008052 2.5e-115 419.5 320 66.6
COL.COLO4_13471 Corchorus olitorius HOM05D006315 ORTHO05D008052 4.2e-115 418.7 290 72.1
Ciclev10001688m.g Citrus clementina HOM05D006315 ORTHO05D008052 1.2e-114 417.2 341 65.4
HanXRQChr02g0046151 Helianthus annuus HOM05D006315 ORTHO05D008052 1.6e-114 416.8 289 71.6
GSVIVG01000051001 Vitis vinifera HOM05D006315 ORTHO05D008052 1.6e-114 416.8 307 69.4
RcHm_v2.0_Chr3g0454751 Rosa chinensis HOM05D006315 ORTHO05D008052 2.1e-114 416.4 289 71.3
Oeu020852.1 Olea europaea HOM05D006315 ORTHO05D008052 2.8e-114 416.0 293 71.3
Actinidia05703 Actinidia chinensis HOM05D006315 ORTHO05D008052 3.6e-114 415.6 295 70.8
FAN02G1008 Fragaria x ananassa HOM05D006315 ORTHO05D008052 4.7e-114 415.2 294 70.7
THA.LOC104818698 Tarenaya hassleriana HOM05D006315 ORTHO05D008052 4.7e-114 415.2 340 65.6
Cpa.g.sc48.53 Carica papaya HOM05D006315 ORTHO05D008052 6.1e-114 414.8 253 78.3
Cc02_g33440 Coffea canephora HOM05D006315 ORTHO05D008052 6.1e-114 414.8 302 69.5
FAN09G2245 Fragaria x ananassa HOM05D006315 ORTHO05D008052 1.0e-113 414.1 288 70.1
Lsat_1_v5_gn_9_86000 Lactuca sativa HOM05D006315 ORTHO05D008052 1.4e-113 413.7 289 70.2
Peaxi162Scf00037g00325 Petunia axillaris HOM05D006315 ORTHO05D008052 1.4e-113 413.7 289 70.6
MBI01_g44539_MAGBIO Magnolia biondii HOM05D006315 ORTHO05D008052 1.8e-113 413.3 264 78.0
Duzib128G1131 Durio zibethinus HOM05D006315 ORTHO05D008052 3.0e-113 412.5 295 71.5
Manes.09G167100 Manihot esculenta HOM05D006315 ORTHO05D008052 3.0e-113 412.5 342 64.0
PGR083G2010 Punica granatum HOM05D006315 ORTHO05D008052 3.0e-113 412.5 336 64.6
FvH4_6g05840 Fragaria vesca HOM05D006315 ORTHO05D008052 5.2e-113 411.8 290 70.7
FAN05G4943 Fragaria x ananassa HOM05D006315 ORTHO05D008052 5.2e-113 411.8 294 70.4
RhsimUnG0225800 Rhododendron simsii HOM05D006315 ORTHO05D008052 5.2e-113 411.8 303 68.3
Prupe.6G325900 Prunus persica HOM05D006315 ORTHO05D008052 6.8e-113 411.4 292 70.5
CiPaw.07G017800 Carya illinoinensis HOM05D006315 ORTHO05D008052 8.9e-113 411.0 292 70.5
Potri.013G020800 Populus trichocarpa HOM05D006315 ORTHO05D008052 2.6e-112 409.5 328 65.5
Gohir.D11G275200 Gossypium hirsutum HOM05D006315 ORTHO05D008052 5.7e-112 408.3 293 71.7
Gorai.007G297000 Gossypium raimondii HOM05D006315 ORTHO05D008052 5.7e-112 408.3 293 71.7
Aqoxy6G00442 Aquilegia oxysepala HOM05D006315 ORTHO05D008052 7.5e-112 407.9 321 63.6
Carub.0006s2500 Capsella rubella HOM05D006315 ORTHO05D008052 7.5e-112 407.9 294 71.1
QL03p006996 Quercus lobata HOM05D006315 ORTHO05D008052 9.8e-112 407.5 344 62.5
Thecc.05G303200 Theobroma cacao HOM05D006315 ORTHO05D008052 9.8e-112 407.5 295 69.8
vmacro05019 Vaccinium macrocarpon HOM05D006315 ORTHO05D008052 2.2e-111 406.4 253 77.1
AUR62005146 Chenopodium quinoa HOM05D006315 ORTHO05D008052 2.9e-111 406.0 370 59.5
ECA236G1566 Erigeron canadensis HOM05D006315 ORTHO05D008052 2.9e-111 406.0 281 70.5
FAN14G1304 Fragaria x ananassa HOM05D006315 ORTHO05D008052 6.4e-111 404.8 297 69.0
TWI36G1375 Tripterygium wilfordii HOM05D006315 ORTHO05D008052 6.4e-111 404.8 294 68.0
Sabra13G0023200 Salix brachista HOM05D006315 ORTHO05D008052 8.3e-111 404.4 334 64.7
Cfa006589 Carpinus fangiana HOM05D006315 ORTHO05D008052 1.1e-110 404.1 296 69.6
FAN14G3373 Fragaria x ananassa HOM05D006315 ORTHO05D008052 1.1e-110 404.1 301 68.1
Aa31LG11G9300 Aethionema arabicum HOM05D006315 ORTHO05D008052 1.8e-110 403.3 300 68.0
A09p05350 Brassica napus HOM05D006315 ORTHO05D008052 1.8e-110 403.3 322 65.2
BraA09t36173Z Brassica rapa HOM05D006315 ORTHO05D008052 1.8e-110 403.3 322 65.2
Sc06g0003310 Simmondsia chinensis HOM05D006315 ORTHO05D008052 1.8e-110 403.3 352 61.4
C09p05830 Brassica napus HOM05D006315 ORTHO05D008052 2.4e-110 402.9 333 63.4
BolC9t53510H Brassica oleracea HOM05D006315 ORTHO05D008052 2.4e-110 402.9 333 63.4
Thhalv10004542m.g Eutrema salsugineum HOM05D006315 ORTHO05D008052 3.2e-110 402.5 298 68.5
Sp2g20750 Schrenkiella parvula HOM05D006315 ORTHO05D008052 3.2e-110 402.5 298 67.1
AL6G39450 Arabidopsis lyrata HOM05D006315 ORTHO05D008052 4.1e-110 402.1 289 69.9
CARHR186120 Cardamine hirsuta HOM05D006315 ORTHO05D008052 9.2e-110 401.0 295 69.2
Ah.06g189370 Amaranthus hybridus HOM05D006315 ORTHO05D008052 2.7e-109 399.4 307 65.5
SalBow8G0023 Salvia bowleyana HOM05D006315 ORTHO05D008052 2.7e-109 399.4 317 64.4
PSO675G8687 Papaver somniferum HOM05D006315 ORTHO05D008052 3.5e-109 399.1 341 61.0
FAN05G5779 Fragaria x ananassa HOM05D006315 ORTHO05D008052 4.6e-109 398.7 314 65.6
AT5G27560 Arabidopsis thaliana HOM05D006315 ORTHO05D008052 5.9e-109 398.3 295 67.8
MD12G1219300 Malus domestica HOM05D006315 ORTHO05D008052 5.9e-109 398.3 293 67.9
ATR1120G073 Amborella trichopoda HOM05D006315 ORTHO05D008052 5.0e-108 395.2 294 66.0
ClCG02G015800 Citrullus lanatus HOM05D006315 ORTHO05D008052 5.0e-108 395.2 347 63.1
MSTRG.16964 Avicennia marina HOM05D006315 ORTHO05D008052 1.6e-106 390.2 293 67.9
Hund07070 Selenicereus undatus HOM05D006315 ORTHO05D008052 2.1e-106 389.8 292 68.8
unitig_37.g12631 Utricularia gibba HOM05D006315 ORTHO05D008052 2.8e-106 389.4 289 66.8
DCAR_022164 Daucus carota HOM05D006315 ORTHO05D008052 4.7e-106 388.7 296 65.2
Lalb_Chr02g0148251 Lupinus albus HOM05D006315 ORTHO05D008052 4.7e-106 388.7 328 61.6
CsaV3_2G005300 Cucumis sativus L. HOM05D006315 ORTHO05D008052 3.1e-105 386.0 344 61.3
Migut.B01035 Erythranthe guttata HOM05D006315 ORTHO05D008052 6.8e-105 384.8 298 65.8
Phvul.007G180000 Phaseolus vulgaris HOM05D006315 ORTHO05D008052 8.9e-105 384.4 295 66.1
VMungo0720G2927 Vigna mungo HOM05D006315 ORTHO05D008052 9.8e-104 380.9 294 65.3
Glyma.10G154300 Glycine max HOM05D006315 ORTHO05D008052 2.9e-103 379.4 298 65.8
Glyma.20G234000 Glycine max HOM05D006315 ORTHO05D008052 4.1e-102 375.6 298 65.4
Ca_10111_v3 Cicer arietinum L. HOM05D006315 ORTHO05D008052 5.4e-102 375.2 290 67.9
Sed0013855 Sechium edule HOM05D006315 ORTHO05D008052 5.4e-102 375.2 253 73.5
arahy.Tifrunner.gnm1.ann1.9IE074 Arachis hypogaea HOM05D006315 ORTHO05D008052 7.0e-102 374.8 336 60.1
Psat6g151200 Pisum sativum HOM05D006315 ORTHO05D008052 1.2e-101 374.0 343 59.8
Solyc01g098990.4 Solanum lycopersicum HOM05D006315 ORTHO05D008052 1.2e-101 374.0 225 79.1
PSO541G4223 Papaver somniferum HOM05D006315 ORTHO05D008052 2.0e-101 373.2 321 61.4
TPR.G6112 Trifolium pratense HOM05D006315 ORTHO05D008052 3.5e-101 372.5 338 59.5
Medtr1g082900 Medicago truncatula HOM05D006315 ORTHO05D008052 3.3e-99 365.9 327 60.9
Lj5g0002172 Lotus japonicus HOM05D006315 ORTHO05D008052 8.1e-98 361.3 292 63.4
Gohir.A11G265000 Gossypium hirsutum HOM05D006315 ORTHO05D008052 8.9e-97 357.8 229 75.1
SGA_v2.0_scaffold13G06358 Striga asiatica HOM05D006315 ORTHO05D008052 2.0e-96 356.7 252 69.0
MELO3C004257.2 Cucumis melo HOM05D006315 ORTHO05D008052 7.5e-96 354.8 310 61.9
SEGI_29864 Sequoiadendron giganteum HOM05D006315 ORTHO05D008052 2.8e-90 336.3 295 56.3
Atru.chr2.406 Acer truncatum HOM05D006315 ORTHO05D008052 5.2e-89 332.0 345 53.6
Haze_04196 Corylus avellana HOM05D006315 ORTHO05D008052 5.8e-88 328.6 307 58.0
EL10Ac4g09351 Beta vulgaris HOM05D006315 ORTHO05D008052 7.1e-86 321.6 249 67.5
Zm00001eb377150 Zea mays HOM05D006315 ORTHO05D008052 3.9e-76 289.3 253 58.1
AagrBONN_evm.TU.Sc2ySwM_368.1535 Anthoceros agrestis HOM05D006315 ORTHO05D008052 2.5e-75 286.6 296 49.7
arahy.Tifrunner.gnm1.ann1.SMKB8G Arachis hypogaea HOM05D006315 ORTHO05D008052 4.0e-73 279.3 346 50.6
Nitab4.5_0000137g0320 Nicotiana tabacum HOM05D006315 ORTHO05D008052 2.0e-72 276.9 173 74.6
Mapoly0046s0092 Marchantia polymorpha HOM05D006315 ORTHO05D008052 4.4e-72 275.8 363 43.8
Lj5A533G15 Lonicera japonica HOM05D006315 ORTHO05D008052 2.1e-69 266.9 162 78.4
Pp3c1_23410 Physcomitrium patens HOM05D006315 ORTHO05D008052 3.1e-65 253.1 294 44.6
Eucgr.B01970 Eucalyptus grandis HOM05D006315 ORTHO05D008052 2.2e-63 246.9 189 62.4
Eucgr.B01875 Eucalyptus grandis HOM05D006315 ORTHO05D008052 1.0e-60 238.0 144 77.8
SMO116G0320 Selaginella moellendorffii HOM05D006315 ORTHO05D008052 1.5e-56 224.2 224 48.7
HPP92_002820 Vanilla planifolia HOM05D006315 ORTHO05D008052 3.0e-52 209.9 175 62.9
Lj5C470G0 Lonicera japonica HOM05D006315 ORTHO05D008052 5.9e-48 195.7 125 75.2
Lj5C532G5 Lonicera japonica HOM05D006315 ORTHO05D008052 5.9e-48 195.7 125 75.2
Actinidia23634 Actinidia chinensis HOM05D006315 ORTHO05D008052 7.6e-48 195.3 131 74.8
HPP92_002878 Vanilla planifolia HOM05D006315 ORTHO05D008052 2.9e-47 193.4 132 71.2
Cre17.g739550 Chlamydomonas reinhardtii HOM05D006315 ORTHO05D008052 1.3e-44 184.5 285 36.8
MCO15G525 Micromonas commoda HOM05D006315 ORTHO05D008052 2.2e-39 167.2 268 36.9
PRCOL_00006277 Prasinoderma coloniale HOM05D006315 ORTHO05D008052 6.3e-34 149.1 279 34.4
EL10As4g23462 Beta vulgaris HOM05D006315 ORTHO05D008052 3.8e-31 139.8 104 68.3
Hma1.2p1_0928F.1_g237790 Hydrangea macrophylla HOM05D006315 ORTHO05D008052 1.4e-25 121.3 112 59.8
Aa31LG11G9280 Aethionema arabicum HOM05D006315 ORTHO05D059511 6.1e-21 105.9 92 57.6
Lj5P531T4 Lonicera japonica HOM05D006315 ORTHO05D008052 4.0e-20 103.2 83 61.4
Lj5A532G12 Lonicera japonica HOM05D006315 ORTHO05D008052 5.2e-20 102.8 201 36.3
Lj5P469T8 Lonicera japonica HOM05D006315 ORTHO05D008052 9.7e-19 98.6 53 83.0
arahy.Tifrunner.gnm1.ann1.T3AGRQ Arachis hypogaea HOM05D006315 ORTHO05D008052 6.1e-13 79.3 65 56.9
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 4.4e-11 73.2 111 42.3
Lj5A470G9 Lonicera japonica HOM05D006315 ORTHO05D008052 3.1e-09 67.0 129 34.9
EL10Ac4g09000 Beta vulgaris HOM05D006315 ORTHO05D008052 2.0e-08 64.3 38 71.1
Lj5A532G11 Lonicera japonica HOM05D006315 ORTHO05D008052 5.9e-08 62.8 129 33.3
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 1.3e-07 61.6 39 69.2
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 1.3e-07 61.6 39 69.2
PGR042G3955 Punica granatum HOM05D001237 ORTHO05D009110 5.0e-07 59.7 269 24.5
Prupe.5G022700 Prunus persica HOM05D001237 ORTHO05D009110 4.2e-06 56.6 249 24.1
AagrBONN_evm.TU.Sc2ySwM_344.1696 Anthoceros agrestis HOM05D011014 ORTHO05D018383 5.5e-06 56.2 282 25.5
HPP92_002889 Vanilla planifolia HOM05D006315 ORTHO05D008052 5.5e-06 56.2 51 54.9


User provided reference genes

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