Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 2.5e-118 428.7 202 100.0
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 1.5e-62 243.4 209 55.5
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 2.5e-62 242.7 206 56.8
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 3.1e-60 235.7 207 56.0
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 2.2e-58 229.6 213 54.0
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 2.2e-58 229.6 188 55.3
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 2.9e-58 229.2 217 51.6
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 1.1e-57 227.3 203 52.2
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 3.2e-57 225.7 207 54.1
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 1.2e-56 223.8 200 52.0
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 1.2e-56 223.8 221 50.2
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 1.6e-56 223.4 207 50.2
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 2.1e-56 223.0 199 54.8
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 2.7e-56 222.6 211 50.7
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 6.0e-56 221.5 214 50.0
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 7.8e-56 221.1 198 53.5
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 3.9e-55 218.8 213 50.7
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 3.9e-55 218.8 203 50.7
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 3.9e-55 218.8 202 54.0
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 1.9e-54 216.5 208 50.0
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 3.3e-54 215.7 210 52.9
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 3.3e-54 215.7 215 48.4
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 4.3e-54 215.3 201 52.2
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 1.6e-53 213.4 204 53.9
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 2.1e-53 213.0 203 51.2
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 2.1e-53 213.0 235 48.9
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 2.8e-53 212.6 207 51.7
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 6.2e-53 211.5 199 52.8
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 6.2e-53 211.5 185 52.4
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 8.1e-53 211.1 201 49.8
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 1.1e-52 210.7 195 49.2
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 1.4e-52 210.3 205 50.7
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 1.8e-52 209.9 213 47.9
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 2.3e-52 209.5 183 53.0
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 2.3e-52 209.5 195 49.2
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 3.1e-52 209.1 204 52.9
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 3.1e-52 209.1 183 53.6
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 4.0e-52 208.8 201 51.2
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 1.2e-51 207.2 184 54.3
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 1.5e-51 206.8 183 51.9
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 2.6e-51 206.1 201 47.8
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 3.4e-51 205.7 206 50.5
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 3.4e-51 205.7 242 46.7
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 3.4e-51 205.7 242 46.7
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 4.4e-51 205.3 201 48.8
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 5.8e-51 204.9 206 46.6
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 7.6e-51 204.5 206 46.6
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 9.9e-51 204.1 204 50.5
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 9.9e-51 204.1 187 52.9
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 9.9e-51 204.1 206 48.1
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 2.2e-50 203.0 204 50.5
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 2.9e-50 202.6 184 51.6
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 4.9e-50 201.8 204 50.5
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 8.3e-50 201.1 200 47.0
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 2.4e-49 199.5 188 52.7
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 2.4e-49 199.5 188 52.7
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 3.2e-49 199.1 191 51.3
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 5.4e-49 198.4 204 47.5
arahy.Tifrunner.gnm1.ann1.WF4WBF Arachis hypogaea HOM05D006653 ORTHO05D008346 9.2e-49 197.6 182 48.9
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 9.2e-49 197.6 187 51.9
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 9.2e-49 197.6 204 50.0
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 1.6e-48 196.8 215 47.9
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 1.6e-48 196.8 204 48.5
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.6e-48 196.8 191 49.7
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 4.6e-48 195.3 210 46.7
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 1.3e-47 193.7 192 48.4
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 1.7e-47 193.4 214 44.9
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 3.0e-47 192.6 187 48.7
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 3.9e-47 192.2 187 51.3
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 5.1e-47 191.8 169 52.1
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 1.5e-46 190.3 199 45.2
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 1.9e-46 189.9 264 41.7
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 1.9e-46 189.9 183 49.2
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 4.3e-46 188.7 211 46.0
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 5.6e-46 188.3 209 47.4
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 1.2e-45 187.2 201 48.8
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 1.6e-45 186.8 203 47.3
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 2.8e-45 186.0 201 43.3
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 2.8e-45 186.0 268 38.8
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 1.1e-44 184.1 241 39.8
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 2.4e-44 183.0 178 50.6
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 6.8e-44 181.4 214 47.2
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 8.9e-44 181.0 204 44.1
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 1.2e-43 180.6 236 40.7
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 1.5e-43 180.3 187 48.1
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 3.4e-43 179.1 160 53.8
RcHm_v2.0_Chr1g0371041 Rosa chinensis HOM05D006653 ORTHO05D008346 5.8e-43 178.3 213 44.1
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 3.8e-42 175.6 182 43.4
ECA232G4592 Erigeron canadensis HOM05D006653 ORTHO05D008346 3.2e-41 172.6 241 38.2
Pp3c2_28750 Physcomitrium patens HOM05D006653 ORTHO05D008346 2.4e-36 156.4 195 39.5
Dinv10585 Davidia involucrata HOM05D006653 ORTHO05D008346 2.2e-34 149.8 116 56.0
MBI03_g37948_MAGBIO Magnolia biondii HOM05D006653 ORTHO05D008346 2.2e-34 149.8 308 33.4
Pp3c11_970 Physcomitrium patens HOM05D006653 ORTHO05D008346 4.9e-34 148.7 192 39.1
MELO3C034224.2 Cucumis melo HOM05D006653 ORTHO05D008346 3.2e-33 146.0 146 48.6
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 1.2e-32 144.1 137 52.6
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 1.6e-32 143.7 141 51.8
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 1.6e-32 143.7 133 53.4
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 1.3e-31 140.6 138 51.4
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 1.5e-30 137.1 141 48.2
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 4.3e-30 135.6 135 51.1
COL.COLO4_25792 Corchorus olitorius HOM05D006653 ORTHO05D008346 7.3e-30 134.8 174 45.4
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 7.3e-30 134.8 261 33.3
Mapoly0095s0003 Marchantia polymorpha HOM05D006653 ORTHO05D008346 9.6e-30 134.4 207 35.3
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 4.8e-29 132.1 201 38.3
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 6.2e-29 131.7 133 50.4
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 6.2e-29 131.7 133 48.9
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 1.1e-28 131.0 133 48.1
HanXRQChr08g0221951 Helianthus annuus HOM05D006653 ORTHO05D008346 5.3e-28 128.6 152 42.8
PGR142G1681 Punica granatum HOM05D006653 ORTHO05D008346 3.4e-27 125.9 130 48.5
Manes.07G134901 Manihot esculenta HOM05D006653 ORTHO05D008346 4.5e-27 125.6 131 48.1
AagrBONN_evm.TU.Sc2ySwM_362.1315 Anthoceros agrestis HOM05D006653 ORTHO05D008346 9.9e-27 124.4 194 33.5
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 9.3e-25 117.9 126 47.6
SMO203G0248 Selaginella moellendorffii HOM05D006653 ORTHO05D008346 1.3e-21 107.5 118 41.5
Lj8C62G17 Lonicera japonica HOM05D006653 ORTHO05D008346 8.1e-21 104.8 122 49.2
Cpa.g.sc19.127 Carica papaya HOM05D006653 ORTHO05D008346 6.9e-20 101.7 106 44.3
SHI28813 Sapria himalayana HOM05D006653 ORTHO05D008346 2.9e-18 96.3 178 33.1
Manes.07G074522 Manihot esculenta HOM05D006653 ORTHO05D008346 1.2e-11 74.3 93 48.4
Manes.04G030750 Manihot esculenta HOM05D006653 ORTHO05D008346 3.8e-10 69.3 55 56.4
CDE04G0201 Ceratophyllum demersum HOM05D002034 ORTHO05D006399 1.9e-09 67.0 53 62.3
Lsat_1_v5_gn_5_133280 Lactuca sativa HOM05D005717 ORTHO05D007221 4.6e-08 62.4 52 51.9


User provided reference genes

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