Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE06G2012 Ceratophyllum demersum HOM05D000147 ORTHO05D004360 1.1e-151 540.0 288 100.0
CDE04G0019 Ceratophyllum demersum HOM05D000147 ORTHO05D004360 2.0e-41 173.7 136 68.4
TAR625G0920 Trochodendron aralioides HOM05D000147 ORTHO05D004360 2.3e-32 143.7 130 57.7
MBI04_g11927_MAGBIO Magnolia biondii HOM05D000147 ORTHO05D004360 4.3e-31 139.4 140 65.0
TAR626G1013 Trochodendron aralioides HOM05D000147 ORTHO05D004360 9.5e-31 138.3 102 68.6
Gohir.A09G084500 Gossypium hirsutum HOM05D000147 ORTHO05D004360 2.1e-30 137.1 138 54.3
Gohir.D09G084400 Gossypium hirsutum HOM05D000147 ORTHO05D004360 2.1e-30 137.1 138 54.3
Gorai.006G100400 Gossypium raimondii HOM05D000147 ORTHO05D004360 2.1e-30 137.1 138 54.3
Sabra03G0033100 Salix brachista HOM05D000147 ORTHO05D004360 3.6e-30 136.3 139 55.4
Haze_16467 Corylus avellana HOM05D000147 ORTHO05D004360 4.7e-30 136.0 138 55.8
SalBow2G0096 Salvia bowleyana HOM05D000147 ORTHO05D004360 4.7e-30 136.0 138 54.3
GSVIVG01017172001 Vitis vinifera HOM05D000147 ORTHO05D004360 8.0e-30 135.2 104 68.3
CSS0048853 Camellia sinensis var. sinensis HOM05D000147 ORTHO05D004360 1.4e-29 134.4 139 54.7
Potri.003G057800 Populus trichocarpa HOM05D000147 ORTHO05D004360 1.4e-29 134.4 139 54.7
Cfa002044 Carpinus fangiana HOM05D000147 ORTHO05D004360 2.3e-29 133.7 138 55.1
Ciclev10025365m.g Citrus clementina HOM05D000147 ORTHO05D004360 3.0e-29 133.3 103 66.0
COL.COLO4_30317 Corchorus olitorius HOM05D000147 ORTHO05D004360 3.0e-29 133.3 141 53.9
Sed0025598 Sechium edule HOM05D000147 ORTHO05D004360 4.0e-29 132.9 138 53.6
Actinidia01786 Actinidia chinensis HOM05D000147 ORTHO05D004360 5.2e-29 132.5 136 53.7
MD17G1198800 Malus domestica HOM05D000147 ORTHO05D004360 5.2e-29 132.5 139 54.0
vmacro18940 Vaccinium macrocarpon HOM05D000147 ORTHO05D004360 5.2e-29 132.5 138 52.2
MD09G1216700 Malus domestica HOM05D000147 ORTHO05D004360 6.8e-29 132.1 138 55.1
QL05p025716 Quercus lobata HOM05D000147 ORTHO05D004360 6.8e-29 132.1 138 51.4
Dinv30539 Davidia involucrata HOM05D000147 ORTHO05D004360 8.9e-29 131.7 138 53.6
Eucgr.J03017 Eucalyptus grandis HOM05D000147 ORTHO05D004360 8.9e-29 131.7 138 54.3
Nn8g39303 Nelumbo nucifera HOM05D000147 ORTHO05D004360 8.9e-29 131.7 104 65.4
CiPaw.02G153100 Carya illinoinensis HOM05D000147 ORTHO05D004360 1.2e-28 131.3 138 53.6
Rhsim08G0218100 Rhododendron simsii HOM05D000147 ORTHO05D004360 1.2e-28 131.3 138 52.2
Gohir.A02G123000 Gossypium hirsutum HOM05D000147 ORTHO05D004360 2.0e-28 130.6 133 54.1
Hma1.2p1_0682F.1_g202550 Hydrangea macrophylla HOM05D000147 ORTHO05D004360 2.6e-28 130.2 138 52.2
Actinidia08825 Actinidia chinensis HOM05D000147 ORTHO05D004360 3.4e-28 129.8 138 52.9
Gorai.002G057900 Gossypium raimondii HOM05D000147 ORTHO05D004360 3.4e-28 129.8 133 53.4
Manes.04G120400 Manihot esculenta HOM05D000147 ORTHO05D004360 3.4e-28 129.8 139 53.2
Gohir.D03G073400 Gossypium hirsutum HOM05D000147 ORTHO05D004360 5.7e-28 129.0 133 53.4
Prupe.3G075400 Prunus persica HOM05D000147 ORTHO05D004360 5.7e-28 129.0 139 54.0
SGA_v2.0_scaffold37G14801 Striga asiatica HOM05D000147 ORTHO05D004360 5.7e-28 129.0 138 50.7
MELO3C023374.2 Cucumis melo HOM05D000147 ORTHO05D004360 7.5e-28 128.6 139 54.0
Lj9A505T68 Lonicera japonica HOM05D000147 ORTHO05D004360 7.5e-28 128.6 140 52.1
Thecc.06G081400 Theobroma cacao HOM05D000147 ORTHO05D004360 7.5e-28 128.6 103 65.0
CsaV3_7G032910 Cucumis sativus L. HOM05D000147 ORTHO05D004360 2.2e-27 127.1 139 53.2
CSS0004467 Camellia sinensis var. sinensis HOM05D000147 ORTHO05D004360 2.9e-27 126.7 103 64.1
Cpa.g.sc10.179 Carica papaya HOM05D000147 ORTHO05D004360 3.7e-27 126.3 128 53.9
CiPaw.01G241300 Carya illinoinensis HOM05D000147 ORTHO05D004360 3.7e-27 126.3 103 63.1
SGA_v2.0_scaffold5G02632 Striga asiatica HOM05D000147 ORTHO05D004360 4.9e-27 125.9 103 62.1
Actinidia16014 Actinidia chinensis HOM05D000147 ORTHO05D004360 6.4e-27 125.6 136 51.5
Manes.11G050700 Manihot esculenta HOM05D000147 ORTHO05D004360 6.4e-27 125.6 139 51.8
RcHm_v2.0_Chr2g0137251 Rosa chinensis HOM05D000147 ORTHO05D004360 6.4e-27 125.6 109 60.6
Cc04_g03670 Coffea canephora HOM05D000147 ORTHO05D004360 8.3e-27 125.2 138 54.3
ClCG09G002400 Citrullus lanatus HOM05D000147 ORTHO05D004360 1.1e-26 124.8 103 64.1
FAN05G5665 Fragaria x ananassa HOM05D000147 ORTHO05D004360 1.4e-26 124.4 109 59.6
FAN14G2580 Fragaria x ananassa HOM05D000147 ORTHO05D004360 2.4e-26 123.6 109 58.7
Oeu000438.1 Olea europaea HOM05D000147 ORTHO05D004360 2.4e-26 123.6 139 49.6
Migut.I00836 Erythranthe guttata HOM05D000147 ORTHO05D004360 4.1e-26 122.9 103 61.2
Sc12g0009090 Simmondsia chinensis HOM05D000147 ORTHO05D004360 4.1e-26 122.9 104 63.5
ATR0083G056 Amborella trichopoda HOM05D000147 ORTHO05D004360 5.4e-26 122.5 139 51.8
CANSAT56G2565 Cannabis sativa HOM05D000147 ORTHO05D004360 5.4e-26 122.5 142 52.8
FAN09G1335 Fragaria x ananassa HOM05D000147 ORTHO05D004360 5.4e-26 122.5 109 58.7
Glyma.07G034000 Glycine max HOM05D000147 ORTHO05D004360 5.4e-26 122.5 143 51.0
HPP92_007681 Vanilla planifolia HOM05D000147 ORTHO05D004360 5.4e-26 122.5 106 60.4
FAN02G1850 Fragaria x ananassa HOM05D000147 ORTHO05D004360 7.0e-26 122.1 109 58.7
Oeu014855.1 Olea europaea HOM05D000147 ORTHO05D004360 7.0e-26 122.1 139 48.9
FvH4_6g30820 Fragaria vesca HOM05D000147 ORTHO05D004360 1.2e-25 121.3 115 55.7
PGSC0003DMG400016543 Solanum tuberosum HOM05D000147 ORTHO05D004360 1.6e-25 120.9 147 48.3
AT1G80350 Arabidopsis thaliana HOM05D000147 ORTHO05D004360 2.0e-25 120.6 139 49.6
Glyma.08G208100 Glycine max HOM05D000147 ORTHO05D004360 2.0e-25 120.6 143 51.7
Psat7g253560 Pisum sativum HOM05D000147 ORTHO05D004360 2.0e-25 120.6 141 52.5
Carub.0002s2722 Capsella rubella HOM05D000147 ORTHO05D004360 4.6e-25 119.4 103 61.2
Nn2g11852 Nelumbo nucifera HOM05D000147 ORTHO05D004360 4.6e-25 119.4 129 54.3
AL2G41150 Arabidopsis lyrata HOM05D000147 ORTHO05D004360 5.9e-25 119.0 138 49.3
Actinidia15820 Actinidia chinensis HOM05D000147 ORTHO05D004360 7.8e-25 118.6 138 49.3
Peaxi162Scf00207g00084 Petunia axillaris HOM05D000147 ORTHO05D004360 7.8e-25 118.6 115 55.7
Sp5g35460 Schrenkiella parvula HOM05D000147 ORTHO05D004360 7.8e-25 118.6 103 60.2
TWI12G0075 Tripterygium wilfordii HOM05D000147 ORTHO05D004360 7.8e-25 118.6 139 51.1
Aa31LG4G620 Aethionema arabicum HOM05D000147 ORTHO05D004360 1.0e-24 118.2 134 47.8
Ca_20415_v3 Cicer arietinum L. HOM05D000147 ORTHO05D004360 1.0e-24 118.2 103 61.2
Thhalv10018398m.g Eutrema salsugineum HOM05D000147 ORTHO05D004360 1.0e-24 118.2 103 59.2
MBI04_g46561_MAGBIO Magnolia biondii HOM05D000147 ORTHO05D004360 1.0e-24 118.2 126 65.1
Medtr4g011810 Medicago truncatula HOM05D000147 ORTHO05D004360 1.0e-24 118.2 141 53.2
MSTRG.11097 Avicennia marina HOM05D000147 ORTHO05D004360 1.3e-24 117.9 103 58.3
Lsat_1_v5_gn_5_129781 Lactuca sativa HOM05D000147 ORTHO05D004360 1.3e-24 117.9 150 46.7
Sopen06g025100 Solanum pennellii HOM05D000147 ORTHO05D004360 1.3e-24 117.9 114 55.3
Hund06595 Selenicereus undatus HOM05D000147 ORTHO05D004360 1.7e-24 117.5 104 60.6
Aqoxy7G01890 Aquilegia oxysepala HOM05D000147 ORTHO05D004360 2.3e-24 117.1 145 52.4
CAN.G395.25 Capsicum annuum HOM05D000147 ORTHO05D004360 2.3e-24 117.1 148 45.9
EL10Ac9g21972 Beta vulgaris HOM05D000147 ORTHO05D004360 3.0e-24 116.7 104 61.5
Phvul.010G152000 Phaseolus vulgaris HOM05D000147 ORTHO05D004360 3.0e-24 116.7 143 51.0
Solyc06g066810.3 Solanum lycopersicum HOM05D000147 ORTHO05D004360 3.0e-24 116.7 114 54.4
Nitab4.5_0003848g0040 Nicotiana tabacum HOM05D000147 ORTHO05D004360 3.9e-24 116.3 89 65.2
Nitab4.5_0008539g0010 Nicotiana tabacum HOM05D000147 ORTHO05D004360 3.9e-24 116.3 89 65.2
CARHR074160 Cardamine hirsuta HOM05D000147 ORTHO05D004360 5.0e-24 115.9 139 48.2
THA.LOC104812479 Tarenaya hassleriana HOM05D000147 ORTHO05D004360 5.0e-24 115.9 103 58.3
Zm00001eb360490 Zea mays HOM05D000147 ORTHO05D004360 5.0e-24 115.9 104 61.5
Lsat_1_v5_gn_1_34101 Lactuca sativa HOM05D000147 ORTHO05D004360 6.6e-24 115.5 151 47.0
Lj3g0024867 Lotus japonicus HOM05D000147 ORTHO05D004360 6.6e-24 115.5 103 63.1
AUR62016416 Chenopodium quinoa HOM05D000147 ORTHO05D004360 1.5e-23 114.4 104 58.7
ECA247G2508 Erigeron canadensis HOM05D000147 ORTHO05D004360 1.5e-23 114.4 142 45.8
TPR.G27508 Trifolium pratense HOM05D000147 ORTHO05D004360 1.5e-23 114.4 148 47.3
Zm00001eb156560 Zea mays HOM05D000147 ORTHO05D004360 1.9e-23 114.0 104 61.5
Rhsim12G0195600 Rhododendron simsii HOM05D000147 ORTHO05D004360 4.3e-23 112.8 102 59.8
Ah.01g021070 Amaranthus hybridus HOM05D000147 ORTHO05D004360 5.6e-23 112.5 105 55.2
Os01g0683100 Oryza sativa ssp. japonica HOM05D000147 ORTHO05D004360 5.6e-23 112.5 139 48.9
VMungo0331G2008 Vigna mungo HOM05D000147 ORTHO05D004360 5.6e-23 112.5 141 49.6
AUR62011601 Chenopodium quinoa HOM05D000147 ORTHO05D004360 7.3e-23 112.1 104 58.7
arahy.Tifrunner.gnm1.ann1.BCE1C7 Arachis hypogaea HOM05D000147 ORTHO05D004360 9.5e-23 111.7 108 57.4
arahy.Tifrunner.gnm1.ann1.SNU5RG Arachis hypogaea HOM05D000147 ORTHO05D004360 9.5e-23 111.7 108 57.4
vmacro16937 Vaccinium macrocarpon HOM05D000147 ORTHO05D004360 9.5e-23 111.7 139 48.2
PGR004G0820 Punica granatum HOM05D000147 ORTHO05D004360 2.8e-22 110.2 122 52.5
HanXRQChr14g0456001 Helianthus annuus HOM05D000147 ORTHO05D004360 3.6e-22 109.8 141 51.8
Thecc.06G081200 Theobroma cacao HOM05D000147 ORTHO05D004360 3.6e-22 109.8 101 57.4
PSO063G0547 Papaver somniferum HOM05D000147 ORTHO05D004360 6.2e-22 109.0 111 54.1
PSO782G0745 Papaver somniferum HOM05D000147 ORTHO05D004360 6.2e-22 109.0 111 54.1
Lalb_Chr24g0395701 Lupinus albus HOM05D000147 ORTHO05D004360 1.4e-21 107.8 122 50.8
Lalb_Chr22g0351121 Lupinus albus HOM05D000147 ORTHO05D004360 1.8e-21 107.5 158 43.7
BcaB02g07281 Brassica carinata HOM05D000147 ORTHO05D004360 4.0e-21 106.3 108 54.6
A02p23630 Brassica napus HOM05D000147 ORTHO05D004360 1.2e-20 104.8 99 56.6
BraA02t07356Z Brassica rapa HOM05D000147 ORTHO05D004360 1.2e-20 104.8 99 56.6
Potri.001G176900 Populus trichocarpa HOM05D000147 ORTHO05D004360 1.5e-20 104.4 139 46.0
DCAR_007551 Daucus carota HOM05D000147 ORTHO05D004360 3.4e-20 103.2 123 52.8
BcaC03g15981 Brassica carinata HOM05D000147 ORTHO05D004360 4.4e-20 102.8 99 55.6
C02p37390 Brassica napus HOM05D000147 ORTHO05D004360 4.4e-20 102.8 99 55.6
HanXRQChr04g0096391 Helianthus annuus HOM05D000147 ORTHO05D004360 4.4e-20 102.8 95 55.8
A07p26620 Brassica napus HOM05D000147 ORTHO05D004360 7.5e-20 102.1 109 53.2
BolC2t09750H Brassica oleracea HOM05D000147 ORTHO05D004360 7.5e-20 102.1 99 55.6
BraA07t30305Z Brassica rapa HOM05D000147 ORTHO05D004360 7.5e-20 102.1 109 53.2
BcaC08g45304 Brassica carinata HOM05D000147 ORTHO05D004360 2.9e-19 100.1 109 52.3
C06p29090 Brassica napus HOM05D000147 ORTHO05D004360 2.9e-19 100.1 109 52.3
BolC6t38072H Brassica oleracea HOM05D000147 ORTHO05D004360 2.9e-19 100.1 109 52.3
Lalb_Chr14g0373581 Lupinus albus HOM05D000147 ORTHO05D004360 1.2e-17 94.7 126 45.2
VMungo1080G1096 Vigna mungo HOM05D000147 ORTHO05D004360 8.6e-16 88.6 142 41.5
SMO361G0775 Selaginella moellendorffii HOM05D000147 ORTHO05D004360 5.6e-15 85.9 108 47.2
Glyma.15G012200 Glycine max HOM05D000147 ORTHO05D004360 1.2e-14 84.7 88 51.1
CBR_g38481 Chara braunii HOM05D000147 ORTHO05D004360 1.8e-13 80.9 85 48.2
Pp3c15_10930 Physcomitrium patens HOM05D000147 ORTHO05D004360 2.3e-13 80.5 109 45.0
Mapoly0116s0028 Marchantia polymorpha HOM05D000147 ORTHO05D004360 5.2e-13 79.3 109 45.0
BcaB05g25275 Brassica carinata HOM05D000147 ORTHO05D004360 3.4e-12 76.6 133 39.8
Phvul.005G173400 Phaseolus vulgaris HOM05D000147 ORTHO05D004360 7.5e-12 75.5 141 37.6
Pp3c9_3800 Physcomitrium patens HOM05D000147 ORTHO05D004360 1.1e-10 71.6 117 41.0


User provided reference genes

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